RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 CCDC116Q8IYX3 515 aa10.26□□□□□ -0.77
CHD9-206ENST00000562791 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
CHD9-206ENST00000562791 PURBQ96QR8 312 aaKnown RBP10.26□□□□□ -0.77
CHD9-206ENST00000562791 GPR37L1O60883 481 aa10.25□□□□□ -0.77
CHD9-206ENST00000562791 PNMA1Q8ND90 353 aa10.25□□□□□ -0.77
CHD9-206ENST00000562791 KCTD15Q96SI1 283 aaPredicted RBP10.25□□□□□ -0.77
CHD9-206ENST00000562791 INTS6LQ5JSJ4 861 aaKnown RBP10.24□□□□□ -0.77
CHD9-206ENST00000562791 LCE2AQ5TA79 106 aaPredicted RBP10.24□□□□□ -0.77
CHD9-206ENST00000562791 MEIOBQ8N635 442 aa10.24□□□□□ -0.77
CHD9-206ENST00000562791 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
CHD9-206ENST00000562791 PPP1R26Q5T8A7 1209 aaPredicted RBP10.23□□□□□ -0.77
CHD9-206ENST00000562791 BANK1Q8NDB2 785 aa10.23□□□□□ -0.77
CHD9-206ENST00000562791 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
CHD9-206ENST00000562791 EMILIN1Q9Y6C2 1016 aa10.22□□□□□ -0.77
CHD9-206ENST00000562791 FBXO45P0C2W1 286 aa10.21□□□□□ -0.77
CHD9-206ENST00000562791 NFX1Q12986 1120 aaKnown RBP10.21□□□□□ -0.77
CHD9-206ENST00000562791 C6orf118Q5T5N4 469 aa10.21□□□□□ -0.77
CHD9-206ENST00000562791 SOBPA7XYQ1 873 aa10.2□□□□□ -0.78
CHD9-206ENST00000562791 SCARF1Q14162 830 aa10.2□□□□□ -0.78
CHD9-206ENST00000562791 LCE2CQ5TA81 110 aa10.2□□□□□ -0.78
CHD9-206ENST00000562791 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
CHD9-206ENST00000562791 LINC00528Q8N1L1 170 aa10.2□□□□□ -0.78
CHD9-206ENST00000562791 CBLBQ13191 982 aa10.19□□□□□ -0.78
CHD9-206ENST00000562791 DZIP3Q86Y13 1208 aaKnown RBP10.19□□□□□ -0.78
CHD9-206ENST00000562791 ZBBXA8MT70 800 aa10.18□□□□□ -0.78
CHD9-206ENST00000562791 SOCS7O14512 581 aa10.18□□□□□ -0.78
CHD9-206ENST00000562791 RAB15P59190 212 aa10.18□□□□□ -0.78
CHD9-206ENST00000562791 NBPF20Q3BBV1 942 aa10.18□□□□□ -0.78
CHD9-206ENST00000562791 TMPRSS4Q9NRS4 437 aa10.17□□□□□ -0.78
CHD9-206ENST00000562791 ESPNB1AK53 854 aa10.16□□□□□ -0.78
CHD9-206ENST00000562791 TERTO14746 1132 aaKnown RBP10.16□□□□□ -0.78
CHD9-206ENST00000562791 WFS1O76024 890 aa10.16□□□□□ -0.78
CHD9-206ENST00000562791 BMP2P12643 396 aa10.16□□□□□ -0.78
CHD9-206ENST00000562791 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
CHD9-206ENST00000562791 NDUFB9Q9Y6M9 179 aa10.16□□□□□ -0.78
CHD9-206ENST00000562791 Q6ZVU0 165 aa10.15□□□□□ -0.78
CHD9-206ENST00000562791 ERVH48-1M5A8F1 160 aa10.14□□□□□ -0.79
CHD9-206ENST00000562791 DHX9Q08211 1270 aaKnown RBP10.14□□□□□ -0.79
CHD9-206ENST00000562791 PCDHB9Q9Y5E1 797 aa10.14□□□□□ -0.79
CHD9-206ENST00000562791 VEGFBP49765 207 aa10.13□□□□□ -0.79
CHD9-206ENST00000562791 ZNF784Q8NCA9 323 aaPredicted RBP10.13□□□□□ -0.79
CHD9-206ENST00000562791 TBC1D2BQ9UPU7 963 aa10.13□□□□□ -0.79
CHD9-206ENST00000562791 SOS2Q07890 1332 aaPredicted RBP10.12□□□□□ -0.79
CHD9-206ENST00000562791 UPP2O95045 317 aa10.12□□□□□ -0.79
CHD9-206ENST00000562791 NR1H3Q13133 447 aa10.12□□□□□ -0.79
CHD9-206ENST00000562791 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
CHD9-206ENST00000562791 TSEN34Q9BSV6 310 aaKnown RBP10.12□□□□□ -0.79
CHD9-206ENST00000562791 NXF1Q9UBU9 619 aaKnown RBP10.12□□□□□ -0.79
CHD9-206ENST00000562791 GIGYF1O75420 1035 aaPredicted RBP10.11□□□□□ -0.79
CHD9-206ENST00000562791 DNMT3LQ9UJW3 386 aa10.11□□□□□ -0.79
CHD9-206ENST00000562791 LILRA1O75019 489 aa10.1□□□□□ -0.79
CHD9-206ENST00000562791 MAN1A2O60476 641 aa10.09□□□□□ -0.79
CHD9-206ENST00000562791 ADD1P35611 737 aaKnown RBP10.09□□□□□ -0.79
CHD9-206ENST00000562791 APBB1O00213 710 aa10.08□□□□□ -0.8
CHD9-206ENST00000562791 SPINT1O43278 529 aa10.08□□□□□ -0.8
CHD9-206ENST00000562791 RELBQ01201 579 aa10.08□□□□□ -0.8
CHD9-206ENST00000562791 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
CHD9-206ENST00000562791 CYLDQ9NQC7 956 aa10.08□□□□□ -0.8
CHD9-206ENST00000562791 IRF5Q13568 498 aa10.07□□□□□ -0.8
CHD9-206ENST00000562791 KDF1Q8NAX2 398 aaPredicted RBP10.07□□□□□ -0.8
CHD9-206ENST00000562791 TTLL8A6PVC2 850 aa10.06□□□□□ -0.8
CHD9-206ENST00000562791 H3BM21 787 aa10.06□□□□□ -0.8
CHD9-206ENST00000562791 ADH1AP07327 375 aa10.06□□□□□ -0.8
CHD9-206ENST00000562791 MCM6Q14566 821 aa10.05□□□□□ -0.8
CHD9-206ENST00000562791 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
CHD9-206ENST00000562791 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
CHD9-206ENST00000562791 NPAS3Q8IXF0 933 aa10.04□□□□□ -0.8
CHD9-206ENST00000562791 INSM2Q96T92 566 aaPredicted RBP10.04□□□□□ -0.8
CHD9-206ENST00000562791 ZNF395Q9H8N7 513 aaPredicted RBP10.04□□□□□ -0.8
CHD9-206ENST00000562791 FIGNL2A6NMB9 653 aa10.03□□□□□ -0.8
CHD9-206ENST00000562791 WIPF1O43516 503 aa10.03□□□□□ -0.8
CHD9-206ENST00000562791 GDPD2Q9HCC8 539 aa10.03□□□□□ -0.8
CHD9-206ENST00000562791 SLC16A10Q8TF71 515 aa10.02□□□□□ -0.81
CHD9-206ENST00000562791 SCTRP47872 440 aa10.01□□□□□ -0.81
CHD9-206ENST00000562791 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
CHD9-206ENST00000562791 GMPRP36959 345 aa10□□□□□ -0.81
CHD9-206ENST00000562791 PTGIRP43119 386 aa10□□□□□ -0.81
CHD9-206ENST00000562791 ERVK-9P63128 1117 aa10□□□□□ -0.81
CHD9-206ENST00000562791 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
CHD9-206ENST00000562791 FOXD4L5Q5VV16 416 aaPredicted RBP10□□□□□ -0.81
CHD9-206ENST00000562791 POLMQ9NP87 494 aaPredicted RBP10□□□□□ -0.81
CHD9-206ENST00000562791 PPFIA3O75145 1194 aa9.99□□□□□ -0.81
CHD9-206ENST00000562791 ABL2P42684 1182 aa9.99□□□□□ -0.81
CHD9-206ENST00000562791 MCCD1P59942 119 aaPredicted RBP9.99□□□□□ -0.81
CHD9-206ENST00000562791 PTSQ03393 145 aa9.99□□□□□ -0.81
CHD9-206ENST00000562791 VAC14Q08AM6 782 aa9.99□□□□□ -0.81
CHD9-206ENST00000562791 RNF217Q8TC41 542 aa9.99□□□□□ -0.81
CHD9-206ENST00000562791 IRF7Q92985 503 aa9.99□□□□□ -0.81
CHD9-206ENST00000562791 PCDHB11Q9Y5F2 797 aa9.99□□□□□ -0.81
CHD9-206ENST00000562791 RNF20Q5VTR2 975 aa9.98□□□□□ -0.81
CHD9-206ENST00000562791 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
CHD9-206ENST00000562791 ZNF592Q92610 1267 aa9.97□□□□□ -0.81
CHD9-206ENST00000562791 CCDC85AQ96PX6 553 aaPredicted RBP9.97□□□□□ -0.81
CHD9-206ENST00000562791 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
CHD9-206ENST00000562791 ATP5J2-PTCD1G3V325 749 aa9.96□□□□□ -0.82
CHD9-206ENST00000562791 VSIG8P0DPA2 414 aa9.96□□□□□ -0.82
CHD9-206ENST00000562791 PRM3Q9NNZ6 103 aa9.96□□□□□ -0.82
CHD9-206ENST00000562791 CDCA7Q9BWT1 371 aaPredicted RBP9.95□□□□□ -0.82
CHD9-206ENST00000562791 OSBPL3Q9H4L5 887 aa9.95□□□□□ -0.82
CHD9-206ENST00000562791 COG6Q9Y2V7 657 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms