RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 GLI3P10071 1580 aa13.09□□□□□ -0.31
CHRFAM7A-204ENST00000562729 USP6P35125 1406 aa13.09□□□□□ -0.31
CHRFAM7A-204ENST00000562729 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
CHRFAM7A-204ENST00000562729 CRYBG1Q9Y4K1 1723 aa13.09□□□□□ -0.31
CHRFAM7A-204ENST00000562729 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
CHRFAM7A-204ENST00000562729 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
CHRFAM7A-204ENST00000562729 FAM98CQ17RN3 349 aaKnown RBP13.08□□□□□ -0.32
CHRFAM7A-204ENST00000562729 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
CHRFAM7A-204ENST00000562729 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
CHRFAM7A-204ENST00000562729 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
CHRFAM7A-204ENST00000562729 USP35Q9P2H5 1018 aa13.07□□□□□ -0.32
CHRFAM7A-204ENST00000562729 NRAPQ86VF7 1730 aa13.07□□□□□ -0.32
CHRFAM7A-204ENST00000562729 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
CHRFAM7A-204ENST00000562729 SOX12O15370 315 aa13.06□□□□□ -0.32
CHRFAM7A-204ENST00000562729 GCP02774 474 aa13.06□□□□□ -0.32
CHRFAM7A-204ENST00000562729 KRT27Q7Z3Y8 459 aa13.06□□□□□ -0.32
CHRFAM7A-204ENST00000562729 CCER1Q8TC90 406 aaPredicted RBP13.06□□□□□ -0.32
CHRFAM7A-204ENST00000562729 NRKQ7Z2Y5 1582 aa13.06□□□□□ -0.32
CHRFAM7A-204ENST00000562729 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
CHRFAM7A-204ENST00000562729 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 TERF2IPQ9NYB0 399 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 USP19O94966 1318 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 TTC21AQ8NDW8 1320 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 AKAP12Q02952 1782 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
CHRFAM7A-204ENST00000562729 KCNH5Q8NCM2 988 aa13.03□□□□□ -0.32
CHRFAM7A-204ENST00000562729 TTC21BQ7Z4L5 1316 aa13.03□□□□□ -0.32
CHRFAM7A-204ENST00000562729 CPDO75976 1380 aa13.03□□□□□ -0.32
CHRFAM7A-204ENST00000562729 TIMELESSQ9UNS1 1208 aa13.02□□□□□ -0.33
CHRFAM7A-204ENST00000562729 SPATA31A1Q5TZJ5 1347 aa13.02□□□□□ -0.33
CHRFAM7A-204ENST00000562729 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
CHRFAM7A-204ENST00000562729 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-204ENST00000562729 MNX1P50219 401 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-204ENST00000562729 TMF1P82094 1093 aa13.01□□□□□ -0.33
CHRFAM7A-204ENST00000562729 USP47Q96K76 1375 aa13.01□□□□□ -0.33
CHRFAM7A-204ENST00000562729 EP400Q96L91 3159 aa13□□□□□ -0.33
CHRFAM7A-204ENST00000562729 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
CHRFAM7A-204ENST00000562729 SSH2Q76I76 1423 aa13□□□□□ -0.33
CHRFAM7A-204ENST00000562729 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
CHRFAM7A-204ENST00000562729 PDE3BQ13370 1112 aa13□□□□□ -0.33
CHRFAM7A-204ENST00000562729 LARP1Q6PKG0 1096 aaKnown RBP13□□□□□ -0.33
CHRFAM7A-204ENST00000562729 SLC12A5Q9H2X9 1139 aa13□□□□□ -0.33
CHRFAM7A-204ENST00000562729 MON2Q7Z3U7 1717 aa12.99□□□□□ -0.33
CHRFAM7A-204ENST00000562729 CPSF1Q10570 1443 aaKnown RBP12.99□□□□□ -0.33
CHRFAM7A-204ENST00000562729 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
CHRFAM7A-204ENST00000562729 TOM1L2Q6ZVM7 507 aa12.99□□□□□ -0.33
CHRFAM7A-204ENST00000562729 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
CHRFAM7A-204ENST00000562729 PHF12Q96QT6 1004 aa12.99□□□□□ -0.33
CHRFAM7A-204ENST00000562729 CAMTA1Q9Y6Y1 1673 aa12.99□□□□□ -0.33
CHRFAM7A-204ENST00000562729 SLIT3O75094 1523 aa12.98□□□□□ -0.33
CHRFAM7A-204ENST00000562729 NINLQ9Y2I6 1382 aa12.98□□□□□ -0.33
CHRFAM7A-204ENST00000562729 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
CHRFAM7A-204ENST00000562729 AATKQ6ZMQ8 1374 aa12.97□□□□□ -0.33
CHRFAM7A-204ENST00000562729 FAM182BQ5T319 152 aa12.97□□□□□ -0.33
CHRFAM7A-204ENST00000562729 NME9Q86XW9 330 aa12.97□□□□□ -0.33
CHRFAM7A-204ENST00000562729 THRAP3Q9Y2W1 955 aaKnown RBP12.97□□□□□ -0.33
CHRFAM7A-204ENST00000562729 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
CHRFAM7A-204ENST00000562729 EDC4Q6P2E9 1401 aaKnown RBP12.96□□□□□ -0.33
CHRFAM7A-204ENST00000562729 A0A1W2PP64 1363 aa12.96□□□□□ -0.33
CHRFAM7A-204ENST00000562729 LMO7Q8WWI1 1683 aa12.96□□□□□ -0.33
CHRFAM7A-204ENST00000562729 BAG6P46379 1132 aa12.96□□□□□ -0.33
CHRFAM7A-204ENST00000562729 BARGINQ6ZT62 677 aa12.96□□□□□ -0.33
CHRFAM7A-204ENST00000562729 TESK2Q96S53 571 aa12.96□□□□□ -0.33
CHRFAM7A-204ENST00000562729 CRB1P82279 1406 aa12.96□□□□□ -0.34
CHRFAM7A-204ENST00000562729 THSD7AQ9UPZ6 1657 aa12.95□□□□□ -0.34
CHRFAM7A-204ENST00000562729 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
CHRFAM7A-204ENST00000562729 FAM196AQ6ZSG2 479 aa12.94□□□□□ -0.34
CHRFAM7A-204ENST00000562729 DEFB132Q7Z7B7 95 aa12.94□□□□□ -0.34
CHRFAM7A-204ENST00000562729 ARHGEF25Q86VW2 580 aa12.94□□□□□ -0.34
CHRFAM7A-204ENST00000562729 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
CHRFAM7A-204ENST00000562729 COG3Q96JB2 828 aa12.93□□□□□ -0.34
CHRFAM7A-204ENST00000562729 RGPD1P0DJD0 1748 aa12.93□□□□□ -0.34
CHRFAM7A-204ENST00000562729 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
CHRFAM7A-204ENST00000562729 USP31Q70CQ4 1352 aa12.92□□□□□ -0.34
CHRFAM7A-204ENST00000562729 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
CHRFAM7A-204ENST00000562729 TRIM37O94972 964 aa12.91□□□□□ -0.34
CHRFAM7A-204ENST00000562729 DDB1Q16531 1140 aa12.91□□□□□ -0.34
CHRFAM7A-204ENST00000562729 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
CHRFAM7A-204ENST00000562729 LTN1O94822 1766 aa12.91□□□□□ -0.34
CHRFAM7A-204ENST00000562729 RGPD5Q99666 1765 aa12.91□□□□□ -0.34
CHRFAM7A-204ENST00000562729 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
CHRFAM7A-204ENST00000562729 NFAT5O94916 1531 aa12.9□□□□□ -0.34
CHRFAM7A-204ENST00000562729 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
CHRFAM7A-204ENST00000562729 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
CHRFAM7A-204ENST00000562729 NLRP2Q9NX02 1062 aa12.9□□□□□ -0.34
CHRFAM7A-204ENST00000562729 COL18A1P39060 1754 aa12.89□□□□□ -0.35
CHRFAM7A-204ENST00000562729 C11orf95C9JLR9 678 aaPredicted RBP12.89□□□□□ -0.35
CHRFAM7A-204ENST00000562729 APBA3O96018 575 aa12.89□□□□□ -0.35
CHRFAM7A-204ENST00000562729 EIF4G2P78344 907 aaKnown RBP eCLIP12.89□□□□□ -0.35
CHRFAM7A-204ENST00000562729 ABCC6O95255 1503 aa12.88□□□□□ -0.35
CHRFAM7A-204ENST00000562729 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
CHRFAM7A-204ENST00000562729 AMPHP49418 695 aa12.88□□□□□ -0.35
CHRFAM7A-204ENST00000562729 EN1Q05925 392 aaPredicted RBP12.88□□□□□ -0.35
CHRFAM7A-204ENST00000562729 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
CHRFAM7A-204ENST00000562729 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
CHRFAM7A-204ENST00000562729 CCDC7Q96M83 1385 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms