RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.22□□□□□ -0.77
TCF4-213ENST00000562543 BAG6P46379 1132 aa10.22□□□□□ -0.77
TCF4-213ENST00000562543 PRELPP51888 382 aa10.22□□□□□ -0.77
TCF4-213ENST00000562543 EN1Q05925 392 aaPredicted RBP10.22□□□□□ -0.77
TCF4-213ENST00000562543 FAM98CQ17RN3 349 aaKnown RBP10.22□□□□□ -0.77
TCF4-213ENST00000562543 CDK11AQ9UQ88 783 aaPredicted RBP10.22□□□□□ -0.77
TCF4-213ENST00000562543 PTCH1Q13635 1447 aa10.22□□□□□ -0.77
TCF4-213ENST00000562543 ARHGAP35Q9NRY4 1499 aa10.22□□□□□ -0.77
TCF4-213ENST00000562543 SMAPO00193 183 aa10.21□□□□□ -0.77
TCF4-213ENST00000562543 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
TCF4-213ENST00000562543 LRRC59Q96AG4 307 aaKnown RBP10.21□□□□□ -0.77
TCF4-213ENST00000562543 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
TCF4-213ENST00000562543 EID1Q9Y6B2 187 aa10.21□□□□□ -0.77
TCF4-213ENST00000562543 WASHC2CQ9Y4E1 1318 aa10.21□□□□□ -0.78
TCF4-213ENST00000562543 C3orf80F5H4A9 247 aa10.2□□□□□ -0.78
TCF4-213ENST00000562543 RGPD1P0DJD0 1748 aa10.2□□□□□ -0.78
TCF4-213ENST00000562543 PDIA6Q15084 440 aa10.2□□□□□ -0.78
TCF4-213ENST00000562543 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.2□□□□□ -0.78
TCF4-213ENST00000562543 TMEM2Q9UHN6 1383 aa10.2□□□□□ -0.78
TCF4-213ENST00000562543 LRRIQ1Q96JM4 1722 aa10.19□□□□□ -0.78
TCF4-213ENST00000562543 KIAA1107Q9UPP5 1409 aa10.19□□□□□ -0.78
TCF4-213ENST00000562543 DHX29Q7Z478 1369 aaKnown RBP10.19□□□□□ -0.78
TCF4-213ENST00000562543 LRCH3Q96II8 777 aa10.19□□□□□ -0.78
TCF4-213ENST00000562543 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
TCF4-213ENST00000562543 SLC26A8Q96RN1 970 aa10.19□□□□□ -0.78
TCF4-213ENST00000562543 FAM198AQ9UFP1 575 aa10.19□□□□□ -0.78
TCF4-213ENST00000562543 GRXCR2A6NFK2 248 aa10.18□□□□□ -0.78
TCF4-213ENST00000562543 HNRNPMP52272 730 aaKnown RBP eCLIP10.18□□□□□ -0.787e-6■■■□□ 17
TCF4-213ENST00000562543 TSR3Q9UJK0 312 aaKnown RBP10.18□□□□□ -0.78
TCF4-213ENST00000562543 MARF1Q9Y4F3 1742 aaKnown RBP10.18□□□□□ -0.78
TCF4-213ENST00000562543 DISP2A7MBM2 1401 aa10.17□□□□□ -0.78
TCF4-213ENST00000562543 KCNC4Q03721 635 aa10.17□□□□□ -0.78
TCF4-213ENST00000562543 PACS2Q86VP3 889 aa10.17□□□□□ -0.78
TCF4-213ENST00000562543 PIK3C2BO00750 1634 aa10.17□□□□□ -0.78
TCF4-213ENST00000562543 TNS1Q9HBL0 1735 aaKnown RBP10.16□□□□□ -0.78
TCF4-213ENST00000562543 E2F4Q16254 413 aa10.16□□□□□ -0.78
TCF4-213ENST00000562543 CDCA7LQ96GN5 454 aa10.16□□□□□ -0.78
TCF4-213ENST00000562543 CFAP44Q96MT7 982 aa10.16□□□□□ -0.78
TCF4-213ENST00000562543 PPP1R1BQ9UD71 204 aaPredicted RBP10.16□□□□□ -0.78
TCF4-213ENST00000562543 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.78
TCF4-213ENST00000562543 KIF3BO15066 747 aa10.15□□□□□ -0.78
TCF4-213ENST00000562543 NYAP1Q6ZVC0 841 aa10.15□□□□□ -0.78
TCF4-213ENST00000562543 PLEKHH2Q8IVE3 1493 aa10.15□□□□□ -0.78
TCF4-213ENST00000562543 CFAP65Q6ZU64 1925 aaKnown RBP10.15□□□□□ -0.79
TCF4-213ENST00000562543 SUPT5HO00267 1087 aaKnown RBP10.14□□□□□ -0.79
TCF4-213ENST00000562543 ATF3P18847 181 aa10.14□□□□□ -0.79
TCF4-213ENST00000562543 PAXIP1Q6ZW49 1069 aaPredicted RBP10.14□□□□□ -0.79
TCF4-213ENST00000562543 C19orf44Q9H6X5 657 aa10.14□□□□□ -0.79
TCF4-213ENST00000562543 LAMC1P11047 1609 aa10.14□□□□□ -0.79
TCF4-213ENST00000562543 SHANK3Q9BYB0 1731 aa10.13□□□□□ -0.79
TCF4-213ENST00000562543 SPDYE16A6NNV3 312 aaPredicted RBP10.13□□□□□ -0.79
TCF4-213ENST00000562543 PRSS12P56730 875 aa10.13□□□□□ -0.79
TCF4-213ENST00000562543 SAMD7Q7Z3H4 446 aa10.13□□□□□ -0.79
TCF4-213ENST00000562543 CDHR5Q9HBB8 845 aa10.13□□□□□ -0.79
TCF4-213ENST00000562543 DCCP43146 1447 aa10.13□□□□□ -0.79
TCF4-213ENST00000562543 PPP4CP60510 307 aa10.12□□□□□ -0.79
TCF4-213ENST00000562543 COL13A1Q5TAT6 717 aaPredicted RBP10.12□□□□□ -0.79
TCF4-213ENST00000562543 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.12□□□□□ -0.79
TCF4-213ENST00000562543 ZNF777Q9ULD5 760 aaPredicted RBP10.12□□□□□ -0.79
TCF4-213ENST00000562543 MST1RQ04912 1400 aa10.12□□□□□ -0.79
TCF4-213ENST00000562543 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
TCF4-213ENST00000562543 RREB1Q92766 1687 aa10.12□□□□□ -0.79
TCF4-213ENST00000562543 HSPA6P17066 643 aa10.11□□□□□ -0.79
TCF4-213ENST00000562543 RANGAP1P46060 587 aaPredicted RBP10.11□□□□□ -0.79
TCF4-213ENST00000562543 SPON1Q9HCB6 807 aa10.11□□□□□ -0.79
TCF4-213ENST00000562543 MYOM2P54296 1465 aa10.1□□□□□ -0.79
TCF4-213ENST00000562543 NUP188Q5SRE5 1749 aa10.1□□□□□ -0.79
TCF4-213ENST00000562543 NRKQ7Z2Y5 1582 aa10.1□□□□□ -0.79
TCF4-213ENST00000562543 C14orf37Q86TY3 774 aa10.1□□□□□ -0.79
TCF4-213ENST00000562543 WDR70Q9NW82 654 aa10.1□□□□□ -0.79
TCF4-213ENST00000562543 OSBPP22059 807 aa10.09□□□□□ -0.79
TCF4-213ENST00000562543 SEPT12Q8IYM1 358 aa10.09□□□□□ -0.79
TCF4-213ENST00000562543 DDX17Q92841 729 aaKnown RBP10.09□□□□□ -0.79
TCF4-213ENST00000562543 TATDN2Q93075 761 aa10.09□□□□□ -0.79
TCF4-213ENST00000562543 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
TCF4-213ENST00000562543 CEP152O94986 1710 aa10.09□□□□□ -0.79
TCF4-213ENST00000562543 KCNQ2O43526 872 aa10.08□□□□□ -0.8
TCF4-213ENST00000562543 KRT27Q7Z3Y8 459 aa10.08□□□□□ -0.8
TCF4-213ENST00000562543 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
TCF4-213ENST00000562543 ADGRB2O60241 1585 aa10.08□□□□□ -0.8
TCF4-213ENST00000562543 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
TCF4-213ENST00000562543 ADGRB3O60242 1522 aa10.07□□□□□ -0.8
TCF4-213ENST00000562543 MYOM1P52179 1685 aa10.07□□□□□ -0.8
TCF4-213ENST00000562543 EZH2Q15910 746 aaKnown RBP10.07□□□□□ -0.8
TCF4-213ENST00000562543 TJAP1Q5JTD0 557 aa10.07□□□□□ -0.8
TCF4-213ENST00000562543 NUDT18Q6ZVK8 323 aa10.07□□□□□ -0.8
TCF4-213ENST00000562543 TNS4Q8IZW8 715 aa10.07□□□□□ -0.8
TCF4-213ENST00000562543 SLIT2O94813 1529 aa10.07□□□□□ -0.8
TCF4-213ENST00000562543 Q6ZNB5 142 aa10.06□□□□□ -0.8
TCF4-213ENST00000562543 MBD5Q9P267 1494 aa10.05□□□□□ -0.8
TCF4-213ENST00000562543 RNF40O75150 1001 aa10.05□□□□□ -0.8
TCF4-213ENST00000562543 ATP1B4Q9UN42 357 aaPredicted RBP10.05□□□□□ -0.8
TCF4-213ENST00000562543 ARIH1Q9Y4X5 557 aaPredicted RBP10.05□□□□□ -0.8
TCF4-213ENST00000562543 CAMKK2Q96RR4 588 aa10.04□□□□□ -0.8
TCF4-213ENST00000562543 MTRQ99707 1265 aa10.04□□□□□ -0.8
TCF4-213ENST00000562543 PARD3Q8TEW0 1356 aa10.03□□□□□ -0.8
TCF4-213ENST00000562543 GOLGB1Q14789 3259 aaKnown RBP10.03□□□□□ -0.8
TCF4-213ENST00000562543 UNC5CLQ8IV45 518 aa10.03□□□□□ -0.8
TCF4-213ENST00000562543 ZNF516Q92618 1163 aa10.03□□□□□ -0.8
TCF4-213ENST00000562543 CASZ1Q86V15 1759 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms