RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 EIF4G2P78344 907 aaKnown RBP eCLIP29.39■■■□□ 2.3
NR4A1-219ENST00000562373 RGPD5Q99666 1765 aa29.39■■■□□ 2.29
NR4A1-219ENST00000562373 THSD7AQ9UPZ6 1657 aa29.38■■■□□ 2.29
NR4A1-219ENST00000562373 BARGINQ6ZT62 677 aa29.38■■■□□ 2.29
NR4A1-219ENST00000562373 TOM1L2Q6ZVM7 507 aa29.38■■■□□ 2.29
NR4A1-219ENST00000562373 FBLN1P23142 703 aa29.37■■■□□ 2.29
NR4A1-219ENST00000562373 CSB-PGBD3P0DP91 1061 aa29.35■■■□□ 2.29
NR4A1-219ENST00000562373 OVOS2A0A0J9YW53 1432 aa29.35■■■□□ 2.29
NR4A1-219ENST00000562373 CRB1P82279 1406 aa29.35■■■□□ 2.29
NR4A1-219ENST00000562373 OVOS2Q6IE36 1432 aa29.35■■■□□ 2.29
NR4A1-219ENST00000562373 EP400Q96L91 3159 aa29.35■■■□□ 2.29
NR4A1-219ENST00000562373 USP54Q70EL1 1684 aa29.34■■■□□ 2.29
NR4A1-219ENST00000562373 CCDC125Q86Z20 511 aa29.34■■■□□ 2.29
NR4A1-219ENST00000562373 COG3Q96JB2 828 aa29.34■■■□□ 2.29
NR4A1-219ENST00000562373 GGNBP2Q9H3C7 697 aa29.34■■■□□ 2.29
NR4A1-219ENST00000562373 CARD14Q9BXL6 1004 aa29.33■■■□□ 2.29
NR4A1-219ENST00000562373 WDR17Q8IZU2 1322 aa29.33■■■□□ 2.29
NR4A1-219ENST00000562373 FYB1O15117 783 aa29.32■■■□□ 2.28
NR4A1-219ENST00000562373 DEFB132Q7Z7B7 95 aa29.32■■■□□ 2.28
NR4A1-219ENST00000562373 THRAP3Q9Y2W1 955 aaKnown RBP29.32■■■□□ 2.28
NR4A1-219ENST00000562373 BLMP54132 1417 aaPredicted RBP29.31■■■□□ 2.28
NR4A1-219ENST00000562373 PDE3BQ13370 1112 aa29.29■■■□□ 2.28
NR4A1-219ENST00000562373 MYOM1P52179 1685 aa29.28■■■□□ 2.28
NR4A1-219ENST00000562373 SF3B2Q13435 895 aaKnown RBP29.28■■■□□ 2.28
NR4A1-219ENST00000562373 LTN1O94822 1766 aa29.28■■■□□ 2.28
NR4A1-219ENST00000562373 C11orf95C9JLR9 678 aaPredicted RBP29.25■■■□□ 2.27
NR4A1-219ENST00000562373 CARD10Q9BWT7 1032 aa29.25■■■□□ 2.27
NR4A1-219ENST00000562373 ANKRD24Q8TF21 1146 aa29.24■■■□□ 2.27
NR4A1-219ENST00000562373 LTV1Q96GA3 475 aaPredicted RBP29.23■■■□□ 2.27
NR4A1-219ENST00000562373 MAP3K19Q56UN5 1328 aa29.22■■■□□ 2.27
NR4A1-219ENST00000562373 NSD3Q9BZ95 1437 aa29.22■■■□□ 2.27
NR4A1-219ENST00000562373 IP6K1Q92551 441 aa29.22■■■□□ 2.27
NR4A1-219ENST00000562373 NLRP2Q9NX02 1062 aa29.22■■■□□ 2.27
NR4A1-219ENST00000562373 TRIM37O94972 964 aa29.21■■■□□ 2.27
NR4A1-219ENST00000562373 RRS1Q15050 365 aaKnown RBP29.21■■■□□ 2.27
NR4A1-219ENST00000562373 FAM196AQ6ZSG2 479 aa29.21■■■□□ 2.27
NR4A1-219ENST00000562373 ERBB3P21860 1342 aa29.2■■■□□ 2.27
NR4A1-219ENST00000562373 AMPHP49418 695 aa29.19■■■□□ 2.26
NR4A1-219ENST00000562373 DDB1Q16531 1140 aa29.19■■■□□ 2.26
NR4A1-219ENST00000562373 ABCC6O95255 1503 aa29.18■■■□□ 2.26
NR4A1-219ENST00000562373 PARP4Q9UKK3 1724 aaKnown RBP29.17■■■□□ 2.26
NR4A1-219ENST00000562373 HOXC9P31274 260 aa29.17■■■□□ 2.26
NR4A1-219ENST00000562373 EN1Q05925 392 aaPredicted RBP29.17■■■□□ 2.26
NR4A1-219ENST00000562373 KIF20BQ96Q89 1820 aa29.15■■■□□ 2.26
NR4A1-219ENST00000562373 BAG6P46379 1132 aa29.15■■■□□ 2.26
NR4A1-219ENST00000562373 PANK3Q9H999 370 aa29.14■■■□□ 2.26
NR4A1-219ENST00000562373 CCDC7Q96M83 1385 aa29.13■■■□□ 2.25
NR4A1-219ENST00000562373 LRRC37A3O60309 1634 aa29.12■■■□□ 2.25
NR4A1-219ENST00000562373 DISP2A7MBM2 1401 aa29.12■■■□□ 2.25
NR4A1-219ENST00000562373 MARCH10Q8NA82 808 aaPredicted RBP29.12■■■□□ 2.25
NR4A1-219ENST00000562373 CDCA7Q9BWT1 371 aaPredicted RBP29.12■■■□□ 2.25
NR4A1-219ENST00000562373 WNK3Q9BYP7 1800 aa29.12■■■□□ 2.25
NR4A1-219ENST00000562373 EXOC5O00471 708 aa29.11■■■□□ 2.25
NR4A1-219ENST00000562373 APBA3O96018 575 aa29.1■■■□□ 2.25
NR4A1-219ENST00000562373 RGPD1P0DJD0 1748 aa29.1■■■□□ 2.25
NR4A1-219ENST00000562373 EZH2Q15910 746 aaKnown RBP29.08■■■□□ 2.25
NR4A1-219ENST00000562373 CGNL1Q0VF96 1302 aa29.08■■■□□ 2.25
NR4A1-219ENST00000562373 IL2RBP14784 551 aa29.07■■■□□ 2.24
NR4A1-219ENST00000562373 HSP90AB2PQ58FF8 381 aa29.07■■■□□ 2.24
NR4A1-219ENST00000562373 TNS1Q9HBL0 1735 aaKnown RBP29.07■■■□□ 2.24
NR4A1-219ENST00000562373 EMILIN1Q9Y6C2 1016 aa29.07■■■□□ 2.24
NR4A1-219ENST00000562373 PTF1AQ7RTS3 328 aa29.06■■■□□ 2.24
NR4A1-219ENST00000562373 OVOS2A0A0G2JMS6 1433 aa29.04■■■□□ 2.24
NR4A1-219ENST00000562373 KIF7Q2M1P5 1343 aa29.04■■■□□ 2.24
NR4A1-219ENST00000562373 TNNT2P45379 298 aaPredicted RBP29.04■■■□□ 2.24
NR4A1-219ENST00000562373 RGPD2P0DJD1 1756 aa29.03■■■□□ 2.24
NR4A1-219ENST00000562373 PEAK1Q9H792 1746 aa29.03■■■□□ 2.24
NR4A1-219ENST00000562373 PPM1GO15355 546 aaPredicted RBP29.03■■■□□ 2.24
NR4A1-219ENST00000562373 NBPF6Q5VWK0 638 aa29.02■■■□□ 2.24
NR4A1-219ENST00000562373 USHBP1Q8N6Y0 703 aa29.02■■■□□ 2.24
NR4A1-219ENST00000562373 NBPF4Q96M43 638 aa29.02■■■□□ 2.24
NR4A1-219ENST00000562373 CAMKK2Q96RR4 588 aa29.02■■■□□ 2.24
NR4A1-219ENST00000562373 RTL1A6NKG5 1358 aa29.01■■■□□ 2.24
NR4A1-219ENST00000562373 TNS2Q63HR2 1409 aa28.98■■■□□ 2.23
NR4A1-219ENST00000562373 PSDA5PKW4 1024 aaPredicted RBP28.97■■■□□ 2.23
NR4A1-219ENST00000562373 FLT4P35916 1363 aa28.97■■■□□ 2.23
NR4A1-219ENST00000562373 SBF2Q86WG5 1849 aa28.97■■■□□ 2.23
NR4A1-219ENST00000562373 ACSBG1Q96GR2 724 aa28.96■■■□□ 2.23
NR4A1-219ENST00000562373 POLKQ9UBT6 870 aa28.96■■■□□ 2.23
NR4A1-219ENST00000562373 INSRP06213 1382 aa28.96■■■□□ 2.23
NR4A1-219ENST00000562373 KCNQ2O43526 872 aa28.95■■■□□ 2.22
NR4A1-219ENST00000562373 DDX54Q8TDD1 881 aaKnown RBP28.95■■■□□ 2.22
NR4A1-219ENST00000562373 FAM208AQ9UK61 1670 aaKnown RBP28.95■■■□□ 2.22
NR4A1-219ENST00000562373 MAP2P11137 1827 aaKnown RBP28.94■■■□□ 2.22
NR4A1-219ENST00000562373 BCL11BQ9C0K0 894 aaPredicted RBP28.94■■■□□ 2.22
NR4A1-219ENST00000562373 KNSTRNQ9Y448 316 aa28.92■■■□□ 2.22
NR4A1-219ENST00000562373 SMG6Q86US8 1419 aaKnown RBP28.91■■■□□ 2.22
NR4A1-219ENST00000562373 KIF24Q5T7B8 1368 aa28.9■■■□□ 2.22
NR4A1-219ENST00000562373 MEGF6O75095 1541 aa28.89■■■□□ 2.22
NR4A1-219ENST00000562373 BCL9O00512 1426 aa28.89■■■□□ 2.22
NR4A1-219ENST00000562373 MORC1Q86VD1 984 aa28.89■■■□□ 2.22
NR4A1-219ENST00000562373 WASHC2AQ641Q2 1341 aa28.89■■■□□ 2.21
NR4A1-219ENST00000562373 ANKRD26Q9UPS8 1709 aa28.89■■■□□ 2.21
NR4A1-219ENST00000562373 R3HDM1Q15032 1099 aaKnown RBP28.88■■■□□ 2.21
NR4A1-219ENST00000562373 ZCRB1Q8TBF4 217 aaKnown RBP28.88■■■□□ 2.21
NR4A1-219ENST00000562373 KAT6BQ8WYB5 2073 aa28.85■■■□□ 2.21
NR4A1-219ENST00000562373 PLSCR1O15162 318 aa28.85■■■□□ 2.21
NR4A1-219ENST00000562373 RAPGEF4Q8WZA2 1011 aa28.85■■■□□ 2.21
NR4A1-219ENST00000562373 CNGB1Q14028 1251 aaPredicted RBP28.84■■■□□ 2.21
NR4A1-219ENST00000562373 AMER1Q5JTC6 1135 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms