RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PRAM1Q96QH2 718 aa8.89□□□□□ -0.99
CAPN3-210ENST00000561817 USP32Q8NFA0 1604 aa8.89□□□□□ -0.99
CAPN3-210ENST00000561817 NCKAP5LQ9HCH0 1330 aa8.88□□□□□ -0.99
CAPN3-210ENST00000561817 POTEB3A0JP26 581 aa8.88□□□□□ -0.99
CAPN3-210ENST00000561817 POTEBQ6S5H4 581 aa8.88□□□□□ -0.99
CAPN3-210ENST00000561817 SPNS2Q8IVW8 549 aa8.88□□□□□ -0.99
CAPN3-210ENST00000561817 MFRPQ9BY79 579 aa8.88□□□□□ -0.99
CAPN3-210ENST00000561817 CD163L1Q9NR16 1453 aa8.88□□□□□ -0.99
CAPN3-210ENST00000561817 PTPRUQ92729 1446 aa8.88□□□□□ -0.99
CAPN3-210ENST00000561817 TXNDC2Q86VQ3 553 aa8.87□□□□□ -0.99
CAPN3-210ENST00000561817 NLRP13Q86W25 1043 aa8.87□□□□□ -0.99
CAPN3-210ENST00000561817 SLC12A5Q9H2X9 1139 aa8.87□□□□□ -0.99
CAPN3-210ENST00000561817 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
CAPN3-210ENST00000561817 KNSTRNQ9Y448 316 aa8.87□□□□□ -0.99
CAPN3-210ENST00000561817 DIP2AQ14689 1571 aa8.86□□□□□ -0.99
CAPN3-210ENST00000561817 ERBB3P21860 1342 aa8.86□□□□□ -0.99
CAPN3-210ENST00000561817 CC2D1BQ5T0F9 858 aaKnown RBP8.86□□□□□ -0.99
CAPN3-210ENST00000561817 WAPLQ7Z5K2 1190 aa8.86□□□□□ -0.99
CAPN3-210ENST00000561817 THEMISQ8N1K5 641 aaPredicted RBP8.86□□□□□ -0.99
CAPN3-210ENST00000561817 INSRP06213 1382 aa8.86□□□□□ -0.99
CAPN3-210ENST00000561817 ANKRD36BQ8N2N9 1353 aa8.86□□□□□ -0.99
CAPN3-210ENST00000561817 ROBO2Q9HCK4 1378 aa8.86□□□□□ -0.99
CAPN3-210ENST00000561817 NINLQ9Y2I6 1382 aa8.86□□□□□ -0.99
CAPN3-210ENST00000561817 MINK1Q8N4C8 1332 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-210ENST00000561817 PPP2R1AP30153 589 aa8.85□□□□□ -0.99
CAPN3-210ENST00000561817 MMRN1Q13201 1228 aa8.85□□□□□ -0.99
CAPN3-210ENST00000561817 CNGB1Q14028 1251 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-210ENST00000561817 SAFB2Q14151 953 aaKnown RBP eCLIP8.85□□□□□ -0.99
CAPN3-210ENST00000561817 POGKQ9P215 609 aa8.85□□□□□ -0.99
CAPN3-210ENST00000561817 TBX22Q9Y458 520 aa8.85□□□□□ -0.99
CAPN3-210ENST00000561817 NPHP4O75161 1426 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-210ENST00000561817 NSD3Q9BZ95 1437 aa8.85□□□□□ -0.99
CAPN3-210ENST00000561817 ADGRB2O60241 1585 aa8.85□□□□□ -0.99
CAPN3-210ENST00000561817 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-210ENST00000561817 ATAD2Q6PL18 1390 aa8.85□□□□□ -0.99
CAPN3-210ENST00000561817 STRCP1A6NGW2 1772 aa8.84□□□□□ -0.99
CAPN3-210ENST00000561817 XRN1Q8IZH2 1706 aaKnown RBP8.84□□□□□ -0.99
CAPN3-210ENST00000561817 FAM9BQ8IZU0 186 aa8.84□□□□□ -0.99
CAPN3-210ENST00000561817 CDK19Q9BWU1 502 aa8.84□□□□□ -0.99
CAPN3-210ENST00000561817 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
CAPN3-210ENST00000561817 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
CAPN3-210ENST00000561817 EID1Q9Y6B2 187 aa8.84□□□□□ -0.99
CAPN3-210ENST00000561817 PTCH1Q13635 1447 aa8.83□□□□□ -1
CAPN3-210ENST00000561817 HNRNPUQ00839 825 aaKnown RBP eCLIP8.83□□□□□ -1
CAPN3-210ENST00000561817 ANKLE2Q86XL3 938 aa8.83□□□□□ -1
CAPN3-210ENST00000561817 TMC1Q8TDI8 760 aa8.83□□□□□ -1
CAPN3-210ENST00000561817 A0A1W2PP64 1363 aa8.83□□□□□ -1
CAPN3-210ENST00000561817 ZBED9Q6R2W3 1325 aa8.82□□□□□ -1
CAPN3-210ENST00000561817 BLMP54132 1417 aaPredicted RBP8.81□□□□□ -1
CAPN3-210ENST00000561817 WASLO00401 505 aaPredicted RBP8.81□□□□□ -1
CAPN3-210ENST00000561817 SLC26A8Q96RN1 970 aa8.81□□□□□ -1
CAPN3-210ENST00000561817 NSD2O96028 1365 aa8.81□□□□□ -1
CAPN3-210ENST00000561817 PIK3R4Q99570 1358 aa8.81□□□□□ -1
CAPN3-210ENST00000561817 ATP7BP35670 1465 aa8.81□□□□□ -1
CAPN3-210ENST00000561817 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
CAPN3-210ENST00000561817 CHD2O14647 1828 aaKnown RBP8.8□□□□□ -1
CAPN3-210ENST00000561817 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
CAPN3-210ENST00000561817 GPR153Q6NV75 609 aa8.8□□□□□ -1
CAPN3-210ENST00000561817 TOPAZ1Q8N9V7 1692 aa8.8□□□□□ -1
CAPN3-210ENST00000561817 ANKRD26Q9UPS8 1709 aa8.8□□□□□ -1
CAPN3-210ENST00000561817 PRR36Q9H6K5 1346 aa8.8□□□□□ -1
CAPN3-210ENST00000561817 VARS2Q5ST30 1063 aaKnown RBP8.79□□□□□ -1
CAPN3-210ENST00000561817 CABP1Q9NZU7 370 aa8.79□□□□□ -1
CAPN3-210ENST00000561817 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
CAPN3-210ENST00000561817 AMOTL2Q9Y2J4 779 aa8.79□□□□□ -1
CAPN3-210ENST00000561817 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
CAPN3-210ENST00000561817 CGNL1Q0VF96 1302 aa8.79□□□□□ -1
CAPN3-210ENST00000561817 CDC42BPGQ6DT37 1551 aa8.78□□□□□ -1
CAPN3-210ENST00000561817 POLR3AO14802 1390 aaPredicted RBP8.78□□□□□ -1
CAPN3-210ENST00000561817 NBR1Q14596 966 aa8.78□□□□□ -1
CAPN3-210ENST00000561817 AKAP12Q02952 1782 aa8.78□□□□□ -1
CAPN3-210ENST00000561817 SHPRHQ149N8 1683 aa8.78□□□□□ -1
CAPN3-210ENST00000561817 ZNF335Q9H4Z2 1342 aaPredicted RBP8.78□□□□□ -1
CAPN3-210ENST00000561817 MON2Q7Z3U7 1717 aa8.77□□□□□ -1
CAPN3-210ENST00000561817 C2orf72A6NCS6 295 aa8.77□□□□□ -1.01
CAPN3-210ENST00000561817 FYB1O15117 783 aa8.77□□□□□ -1.01
CAPN3-210ENST00000561817 BBXQ8WY36 941 aaPredicted RBP8.77□□□□□ -1.01
CAPN3-210ENST00000561817 NUDT16Q96DE0 195 aaKnown RBP8.77□□□□□ -1.01
CAPN3-210ENST00000561817 TERF2IPQ9NYB0 399 aa8.77□□□□□ -1.01
CAPN3-210ENST00000561817 PPIP5K1Q6PFW1 1433 aa8.77□□□□□ -1.01
CAPN3-210ENST00000561817 NWD1Q149M9 1564 aa8.77□□□□□ -1.01
CAPN3-210ENST00000561817 KIF20BQ96Q89 1820 aa8.76□□□□□ -1.01
CAPN3-210ENST00000561817 KIF3CO14782 793 aa8.76□□□□□ -1.01
CAPN3-210ENST00000561817 ARSIQ5FYB1 569 aa8.76□□□□□ -1.01
CAPN3-210ENST00000561817 MORC1Q86VD1 984 aa8.76□□□□□ -1.01
CAPN3-210ENST00000561817 ADAMTS8Q9UP79 889 aa8.76□□□□□ -1.01
CAPN3-210ENST00000561817 NRKQ7Z2Y5 1582 aa8.75□□□□□ -1.01
CAPN3-210ENST00000561817 EDC4Q6P2E9 1401 aaKnown RBP8.75□□□□□ -1.01
CAPN3-210ENST00000561817 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
CAPN3-210ENST00000561817 PLEKHG3A1L390 1219 aa8.75□□□□□ -1.01
CAPN3-210ENST00000561817 KCNA6P17658 529 aa8.75□□□□□ -1.01
CAPN3-210ENST00000561817 PAXIP1Q6ZW49 1069 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-210ENST00000561817 TMC2Q8TDI7 906 aa8.75□□□□□ -1.01
CAPN3-210ENST00000561817 LTBP4Q8N2S1 1624 aa8.75□□□□□ -1.01
CAPN3-210ENST00000561817 COL3A1P02461 1466 aaPredicted RBP8.75□□□□□ -1.01
CAPN3-210ENST00000561817 NKTRP30414 1462 aaKnown RBP8.75□□□□□ -1.01
CAPN3-210ENST00000561817 NALCNQ8IZF0 1738 aa8.74□□□□□ -1.01
CAPN3-210ENST00000561817 SSH2Q76I76 1423 aa8.74□□□□□ -1.01
CAPN3-210ENST00000561817 HDGFL2Q7Z4V5 671 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-210ENST00000561817 ZNF687Q8N1G0 1237 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms