RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
COTL1-202ENST00000561707 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
COTL1-202ENST00000561707 U2AF1L5P0DN76 240 aaPredicted RBP17.12■□□□□ 0.33
COTL1-202ENST00000561707 U2AF1Q01081 240 aaKnown RBP eCLIP17.12■□□□□ 0.33
COTL1-202ENST00000561707 CHRNA2Q15822 529 aa17.12■□□□□ 0.33
COTL1-202ENST00000561707 RGPD5Q99666 1765 aa17.12■□□□□ 0.33
COTL1-202ENST00000561707 HAP1P54257 671 aaPredicted RBP17.11■□□□□ 0.33
COTL1-202ENST00000561707 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
COTL1-202ENST00000561707 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
COTL1-202ENST00000561707 FLT4P35916 1363 aa17.11■□□□□ 0.33
COTL1-202ENST00000561707 HNRNPUQ00839 825 aaKnown RBP eCLIP17.09■□□□□ 0.33
COTL1-202ENST00000561707 KIAA0232Q92628 1395 aa17.09■□□□□ 0.33
COTL1-202ENST00000561707 COL18A1P39060 1754 aa17.08■□□□□ 0.33
COTL1-202ENST00000561707 ABCA3Q99758 1704 aa17.08■□□□□ 0.32
COTL1-202ENST00000561707 KIF24Q5T7B8 1368 aa17.08■□□□□ 0.32
COTL1-202ENST00000561707 HMOX1P09601 288 aa17.08■□□□□ 0.32
COTL1-202ENST00000561707 HSPA1LP34931 641 aa17.08■□□□□ 0.32
COTL1-202ENST00000561707 FAM83GA6ND36 823 aa17.07■□□□□ 0.32
COTL1-202ENST00000561707 NUTM2BA6NNL0 878 aaPredicted RBP17.06■□□□□ 0.32
COTL1-202ENST00000561707 NUTM2EB1AL46 878 aaPredicted RBP17.06■□□□□ 0.32
COTL1-202ENST00000561707 NUTM2AQ8IVF1 878 aaPredicted RBP17.06■□□□□ 0.32
COTL1-202ENST00000561707 EYA1Q99502 592 aa17.06■□□□□ 0.32
COTL1-202ENST00000561707 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
COTL1-202ENST00000561707 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
COTL1-202ENST00000561707 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
COTL1-202ENST00000561707 CPDO75976 1380 aa17.05■□□□□ 0.32
COTL1-202ENST00000561707 AEBP1Q8IUX7 1158 aa17.05■□□□□ 0.32
COTL1-202ENST00000561707 ANKRD24Q8TF21 1146 aa17.05■□□□□ 0.32
COTL1-202ENST00000561707 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
COTL1-202ENST00000561707 PRDM11Q9NQV5 511 aa17.05■□□□□ 0.32
COTL1-202ENST00000561707 COL22A1Q8NFW1 1626 aaPredicted RBP17.05■□□□□ 0.32
COTL1-202ENST00000561707 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
COTL1-202ENST00000561707 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
COTL1-202ENST00000561707 RUNDC1Q96C34 613 aa17.04■□□□□ 0.32
COTL1-202ENST00000561707 PLEKHF1Q96S99 279 aa17.04■□□□□ 0.32
COTL1-202ENST00000561707 APAF1O14727 1248 aa17.03■□□□□ 0.32
COTL1-202ENST00000561707 NBPF6Q5VWK0 638 aa17.03■□□□□ 0.32
COTL1-202ENST00000561707 NBPF4Q96M43 638 aa17.03■□□□□ 0.32
COTL1-202ENST00000561707 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
COTL1-202ENST00000561707 FCHSD2O94868 740 aa17.02■□□□□ 0.32
COTL1-202ENST00000561707 ADAMTS2O95450 1211 aa17.02■□□□□ 0.32
COTL1-202ENST00000561707 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
COTL1-202ENST00000561707 USHBP1Q8N6Y0 703 aa17.02■□□□□ 0.32
COTL1-202ENST00000561707 RGPD1P0DJD0 1748 aa17.01■□□□□ 0.31
COTL1-202ENST00000561707 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
COTL1-202ENST00000561707 JCADQ9P266 1359 aa17.01■□□□□ 0.31
COTL1-202ENST00000561707 TCP11L2Q8N4U5 519 aa17■□□□□ 0.31
COTL1-202ENST00000561707 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
COTL1-202ENST00000561707 CAMTA1Q9Y6Y1 1673 aa17■□□□□ 0.31
COTL1-202ENST00000561707 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
COTL1-202ENST00000561707 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
COTL1-202ENST00000561707 NEUROD2Q15784 382 aa16.98■□□□□ 0.31
COTL1-202ENST00000561707 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
COTL1-202ENST00000561707 ERBB3P21860 1342 aa16.97■□□□□ 0.31
COTL1-202ENST00000561707 EVA1CP58658 441 aa16.97■□□□□ 0.31
COTL1-202ENST00000561707 STRN4Q9NRL3 753 aa16.97■□□□□ 0.31
COTL1-202ENST00000561707 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
COTL1-202ENST00000561707 LMO7Q8WWI1 1683 aa16.97■□□□□ 0.31
COTL1-202ENST00000561707 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
COTL1-202ENST00000561707 TMPOP42166 694 aaKnown RBP16.95■□□□□ 0.3
COTL1-202ENST00000561707 MAPK8IP3Q9UPT6 1336 aa16.95■□□□□ 0.3
COTL1-202ENST00000561707 LARP1Q6PKG0 1096 aaKnown RBP16.94■□□□□ 0.3
COTL1-202ENST00000561707 ABCC6O95255 1503 aa16.94■□□□□ 0.3
COTL1-202ENST00000561707 COL14A1Q05707 1796 aaKnown RBP16.94■□□□□ 0.3
COTL1-202ENST00000561707 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
COTL1-202ENST00000561707 KDRP35968 1356 aa16.93■□□□□ 0.3
COTL1-202ENST00000561707 NEFMP07197 916 aa16.92■□□□□ 0.3
COTL1-202ENST00000561707 RIPK4P57078 832 aa16.92■□□□□ 0.3
COTL1-202ENST00000561707 NFE2L2Q16236 605 aa16.92■□□□□ 0.3
COTL1-202ENST00000561707 TOM1L2Q6ZVM7 507 aa16.92■□□□□ 0.3
COTL1-202ENST00000561707 SPATA31A6Q5VVP1 1343 aa16.92■□□□□ 0.3
COTL1-202ENST00000561707 WDR17Q8IZU2 1322 aa16.92■□□□□ 0.3
COTL1-202ENST00000561707 COL5A2P05997 1499 aaPredicted RBP16.92■□□□□ 0.3
COTL1-202ENST00000561707 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
COTL1-202ENST00000561707 DLG5Q8TDM6 1919 aa16.9■□□□□ 0.3
COTL1-202ENST00000561707 NGLY1Q96IV0 654 aa16.9■□□□□ 0.3
COTL1-202ENST00000561707 C8orf37Q96NL8 207 aa16.9■□□□□ 0.3
COTL1-202ENST00000561707 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
COTL1-202ENST00000561707 LRP6O75581 1613 aa16.89■□□□□ 0.29
COTL1-202ENST00000561707 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
COTL1-202ENST00000561707 WWC1Q8IX03 1113 aa16.89■□□□□ 0.29
COTL1-202ENST00000561707 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
COTL1-202ENST00000561707 CARD10Q9BWT7 1032 aa16.89■□□□□ 0.29
COTL1-202ENST00000561707 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
COTL1-202ENST00000561707 ZNF521Q96K83 1311 aa16.88■□□□□ 0.29
COTL1-202ENST00000561707 FAM208AQ9UK61 1670 aaKnown RBP16.88■□□□□ 0.29
COTL1-202ENST00000561707 NGEFQ8N5V2 710 aa16.87■□□□□ 0.29
COTL1-202ENST00000561707 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
COTL1-202ENST00000561707 CENPBP07199 599 aaPredicted RBP16.86■□□□□ 0.29
COTL1-202ENST00000561707 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
COTL1-202ENST00000561707 CCDC27Q2M243 656 aa16.86■□□□□ 0.29
COTL1-202ENST00000561707 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
COTL1-202ENST00000561707 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
COTL1-202ENST00000561707 RAPGEF4Q8WZA2 1011 aa16.86■□□□□ 0.29
COTL1-202ENST00000561707 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
COTL1-202ENST00000561707 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
COTL1-202ENST00000561707 THUMPD2Q9BTF0 503 aaKnown RBP16.85■□□□□ 0.29
COTL1-202ENST00000561707 SPINK5Q9NQ38 1064 aaPredicted RBP16.85■□□□□ 0.29
COTL1-202ENST00000561707 SLIT2O94813 1529 aa16.85■□□□□ 0.29
COTL1-202ENST00000561707 GAS2L2Q8NHY3 880 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms