RNA–Protein interactions for RNA: ENST00000561667.1

FANCA-207, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-207ENST00000561667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.63■□□□□ 0.25
FANCA-207ENST00000561667 KTN1Q86UP2 1357 aaKnown RBP16.63■□□□□ 0.25
FANCA-207ENST00000561667 OVOS2A0A0G2JMS6 1433 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 OVOS2A0A0J9YW53 1432 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 OVOS2Q6IE36 1432 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 NFAT5O94916 1531 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 DDB1Q16531 1140 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 ARHGEF25Q86VW2 580 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 WDR17Q8IZU2 1322 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 PARD3Q8TEW0 1356 aa16.62■□□□□ 0.25
FANCA-207ENST00000561667 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
FANCA-207ENST00000561667 NME9Q86XW9 330 aa16.6■□□□□ 0.25
FANCA-207ENST00000561667 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
FANCA-207ENST00000561667 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
FANCA-207ENST00000561667 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
FANCA-207ENST00000561667 CD163L1Q9NR16 1453 aa16.59■□□□□ 0.25
FANCA-207ENST00000561667 LTN1O94822 1766 aa16.59■□□□□ 0.25
FANCA-207ENST00000561667 TMC1Q8TDI8 760 aa16.58■□□□□ 0.24
FANCA-207ENST00000561667 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
FANCA-207ENST00000561667 ANO8Q9HCE9 1232 aaPredicted RBP16.58■□□□□ 0.24
FANCA-207ENST00000561667 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
FANCA-207ENST00000561667 NBPF14Q5TI25 921 aa16.57■□□□□ 0.24
FANCA-207ENST00000561667 KCNH5Q8NCM2 988 aa16.57■□□□□ 0.24
FANCA-207ENST00000561667 PDGFDQ9GZP0 370 aaPredicted RBP16.57■□□□□ 0.24
FANCA-207ENST00000561667 SLC12A5Q9H2X9 1139 aa16.56■□□□□ 0.24
FANCA-207ENST00000561667 SBNO2Q9Y2G9 1366 aa16.55■□□□□ 0.24
FANCA-207ENST00000561667 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
FANCA-207ENST00000561667 RGPD3A6NKT7 1758 aaPredicted RBP16.55■□□□□ 0.24
FANCA-207ENST00000561667 RGPD4Q7Z3J3 1758 aa16.55■□□□□ 0.24
FANCA-207ENST00000561667 PROM2Q8N271 834 aa16.54■□□□□ 0.24
FANCA-207ENST00000561667 BCL11BQ9C0K0 894 aaPredicted RBP16.54■□□□□ 0.24
FANCA-207ENST00000561667 KCNQ2O43526 872 aa16.53■□□□□ 0.24
FANCA-207ENST00000561667 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
FANCA-207ENST00000561667 KAT6BQ8WYB5 2073 aa16.52■□□□□ 0.24
FANCA-207ENST00000561667 CASZ1Q86V15 1759 aa16.52■□□□□ 0.24
FANCA-207ENST00000561667 TONSLQ96HA7 1378 aa16.51■□□□□ 0.23
FANCA-207ENST00000561667 ACSBG1Q96GR2 724 aa16.51■□□□□ 0.23
FANCA-207ENST00000561667 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
FANCA-207ENST00000561667 A0A1W2PP64 1363 aa16.51■□□□□ 0.23
FANCA-207ENST00000561667 USP31Q70CQ4 1352 aa16.51■□□□□ 0.23
FANCA-207ENST00000561667 EXOC5O00471 708 aa16.5■□□□□ 0.23
FANCA-207ENST00000561667 PLSCR1O15162 318 aa16.5■□□□□ 0.23
FANCA-207ENST00000561667 CDCA7Q9BWT1 371 aaPredicted RBP16.5■□□□□ 0.23
FANCA-207ENST00000561667 SPON1Q9HCB6 807 aa16.5■□□□□ 0.23
FANCA-207ENST00000561667 PPP1R1BQ9UD71 204 aaPredicted RBP16.5■□□□□ 0.23
FANCA-207ENST00000561667 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
FANCA-207ENST00000561667 ERBB3P21860 1342 aa16.49■□□□□ 0.23
FANCA-207ENST00000561667 FBLN1P23142 703 aa16.49■□□□□ 0.23
FANCA-207ENST00000561667 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
FANCA-207ENST00000561667 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
FANCA-207ENST00000561667 ZBTB7AO95365 584 aa16.48■□□□□ 0.23
FANCA-207ENST00000561667 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
FANCA-207ENST00000561667 ANKRD24Q8TF21 1146 aa16.48■□□□□ 0.23
FANCA-207ENST00000561667 NHSQ6T4R5 1651 aa16.48■□□□□ 0.23
FANCA-207ENST00000561667 ABCC6O95255 1503 aa16.48■□□□□ 0.23
FANCA-207ENST00000561667 EDC4Q6P2E9 1401 aaKnown RBP16.47■□□□□ 0.23
FANCA-207ENST00000561667 TXNRD1Q16881 649 aa16.47■□□□□ 0.23
FANCA-207ENST00000561667 LTV1Q96GA3 475 aaPredicted RBP16.47■□□□□ 0.23
FANCA-207ENST00000561667 BTAF1O14981 1849 aa16.47■□□□□ 0.23
FANCA-207ENST00000561667 MYOM1P52179 1685 aa16.46■□□□□ 0.23
FANCA-207ENST00000561667 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.23
FANCA-207ENST00000561667 BCL9O00512 1426 aa16.46■□□□□ 0.23
FANCA-207ENST00000561667 ST20-MTHFSA0A0A6YYL1 179 aa16.45■□□□□ 0.22
FANCA-207ENST00000561667 TESK2Q96S53 571 aa16.45■□□□□ 0.22
FANCA-207ENST00000561667 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
FANCA-207ENST00000561667 IL2RBP14784 551 aa16.44■□□□□ 0.22
FANCA-207ENST00000561667 TERF2IPQ9NYB0 399 aa16.44■□□□□ 0.22
FANCA-207ENST00000561667 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
FANCA-207ENST00000561667 PTGER2P43116 358 aa16.41■□□□□ 0.22
FANCA-207ENST00000561667 SLC15A2Q16348 729 aa16.41■□□□□ 0.22
FANCA-207ENST00000561667 YY1P25490 414 aa16.4■□□□□ 0.22
FANCA-207ENST00000561667 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
FANCA-207ENST00000561667 PAPPAQ13219 1627 aa16.4■□□□□ 0.22
FANCA-207ENST00000561667 MAP3K19Q56UN5 1328 aa16.4■□□□□ 0.22
FANCA-207ENST00000561667 NINLQ9Y2I6 1382 aa16.39■□□□□ 0.21
FANCA-207ENST00000561667 KCNQ4P56696 695 aa16.39■□□□□ 0.21
FANCA-207ENST00000561667 IP6K1Q92551 441 aa16.39■□□□□ 0.21
FANCA-207ENST00000561667 FAM208AQ9UK61 1670 aaKnown RBP16.39■□□□□ 0.21
FANCA-207ENST00000561667 ZNF827Q17R98 1081 aa16.38■□□□□ 0.21
FANCA-207ENST00000561667 LRRC4BQ9NT99 713 aa16.38■□□□□ 0.21
FANCA-207ENST00000561667 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
FANCA-207ENST00000561667 SHANK3Q9BYB0 1731 aa16.38■□□□□ 0.21
FANCA-207ENST00000561667 HOXC9P31274 260 aa16.37■□□□□ 0.21
FANCA-207ENST00000561667 COG3Q96JB2 828 aa16.37■□□□□ 0.21
FANCA-207ENST00000561667 AMPHP49418 695 aa16.36■□□□□ 0.21
FANCA-207ENST00000561667 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
FANCA-207ENST00000561667 USHBP1Q8N6Y0 703 aa16.36■□□□□ 0.21
FANCA-207ENST00000561667 GGNBP2Q9H3C7 697 aa16.36■□□□□ 0.21
FANCA-207ENST00000561667 TUBGCP6Q96RT7 1819 aa16.35■□□□□ 0.21
FANCA-207ENST00000561667 MEGF6O75095 1541 aa16.35■□□□□ 0.21
FANCA-207ENST00000561667 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
FANCA-207ENST00000561667 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
FANCA-207ENST00000561667 FHDC1Q9C0D6 1143 aaPredicted RBP16.35■□□□□ 0.21
FANCA-207ENST00000561667 USP47Q96K76 1375 aa16.34■□□□□ 0.21
FANCA-207ENST00000561667 UTRNP46939 3433 aa16.33■□□□□ 0.21
FANCA-207ENST00000561667 ANKRD36BQ8N2N9 1353 aa16.33■□□□□ 0.2
FANCA-207ENST00000561667 KIF20BQ96Q89 1820 aa16.33■□□□□ 0.2
FANCA-207ENST00000561667 FYB1O15117 783 aa16.32■□□□□ 0.2
FANCA-207ENST00000561667 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
FANCA-207ENST00000561667 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms