RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
CARMIL3-204ENST00000561354 TTC21AQ8NDW8 1320 aa16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 BCL9O00512 1426 aa16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 CPSF1Q10570 1443 aaKnown RBP16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
CARMIL3-204ENST00000561354 CARD10Q9BWT7 1032 aa16.95■□□□□ 0.3
CARMIL3-204ENST00000561354 SPON1Q9HCB6 807 aa16.95■□□□□ 0.3
CARMIL3-204ENST00000561354 SBF2Q86WG5 1849 aa16.95■□□□□ 0.3
CARMIL3-204ENST00000561354 KCNQ2O43526 872 aa16.94■□□□□ 0.3
CARMIL3-204ENST00000561354 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
CARMIL3-204ENST00000561354 MARCH10Q8NA82 808 aaPredicted RBP16.93■□□□□ 0.3
CARMIL3-204ENST00000561354 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
CARMIL3-204ENST00000561354 KTN1Q86UP2 1357 aaKnown RBP16.91■□□□□ 0.3
CARMIL3-204ENST00000561354 CSB-PGBD3P0DP91 1061 aa16.91■□□□□ 0.3
CARMIL3-204ENST00000561354 PTF1AQ7RTS3 328 aa16.91■□□□□ 0.3
CARMIL3-204ENST00000561354 NFAT5O94916 1531 aa16.91■□□□□ 0.3
CARMIL3-204ENST00000561354 ABCC6O95255 1503 aa16.91■□□□□ 0.3
CARMIL3-204ENST00000561354 CCDC7Q96M83 1385 aa16.9■□□□□ 0.3
CARMIL3-204ENST00000561354 SBNO2Q9Y2G9 1366 aa16.9■□□□□ 0.3
CARMIL3-204ENST00000561354 SOX12O15370 315 aa16.9■□□□□ 0.3
CARMIL3-204ENST00000561354 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
CARMIL3-204ENST00000561354 PROM2Q8N271 834 aa16.9■□□□□ 0.3
CARMIL3-204ENST00000561354 PPP1R1BQ9UD71 204 aaPredicted RBP16.9■□□□□ 0.3
CARMIL3-204ENST00000561354 RGPD5Q99666 1765 aa16.89■□□□□ 0.3
CARMIL3-204ENST00000561354 EXOC5O00471 708 aa16.89■□□□□ 0.29
CARMIL3-204ENST00000561354 ANO8Q9HCE9 1232 aaPredicted RBP16.89■□□□□ 0.29
CARMIL3-204ENST00000561354 USP31Q70CQ4 1352 aa16.89■□□□□ 0.29
CARMIL3-204ENST00000561354 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
CARMIL3-204ENST00000561354 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
CARMIL3-204ENST00000561354 CASZ1Q86V15 1759 aa16.86■□□□□ 0.29
CARMIL3-204ENST00000561354 DCAF8L1A6NGE4 600 aa16.85■□□□□ 0.29
CARMIL3-204ENST00000561354 YY1P25490 414 aa16.85■□□□□ 0.29
CARMIL3-204ENST00000561354 TXNRD1Q16881 649 aa16.85■□□□□ 0.29
CARMIL3-204ENST00000561354 TNS2Q63HR2 1409 aa16.85■□□□□ 0.29
CARMIL3-204ENST00000561354 USP54Q70EL1 1684 aa16.85■□□□□ 0.29
CARMIL3-204ENST00000561354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
CARMIL3-204ENST00000561354 ERBB3P21860 1342 aa16.84■□□□□ 0.29
CARMIL3-204ENST00000561354 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
CARMIL3-204ENST00000561354 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
CARMIL3-204ENST00000561354 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
CARMIL3-204ENST00000561354 SLC15A2Q16348 729 aa16.82■□□□□ 0.28
CARMIL3-204ENST00000561354 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
CARMIL3-204ENST00000561354 NME9Q86XW9 330 aa16.82■□□□□ 0.28
CARMIL3-204ENST00000561354 STK32BQ9NY57 414 aa16.82■□□□□ 0.28
CARMIL3-204ENST00000561354 PUS7Q96PZ0 661 aaKnown RBP16.81■□□□□ 0.28
CARMIL3-204ENST00000561354 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
CARMIL3-204ENST00000561354 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
CARMIL3-204ENST00000561354 IL2RBP14784 551 aa16.8■□□□□ 0.28
CARMIL3-204ENST00000561354 PTGER2P43116 358 aa16.8■□□□□ 0.28
CARMIL3-204ENST00000561354 TMC1Q8TDI8 760 aa16.8■□□□□ 0.28
CARMIL3-204ENST00000561354 SLC12A5Q9H2X9 1139 aa16.8■□□□□ 0.28
CARMIL3-204ENST00000561354 EDC4Q6P2E9 1401 aaKnown RBP16.79■□□□□ 0.28
CARMIL3-204ENST00000561354 NHSQ6T4R5 1651 aa16.79■□□□□ 0.28
CARMIL3-204ENST00000561354 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
CARMIL3-204ENST00000561354 ANKRD24Q8TF21 1146 aa16.78■□□□□ 0.28
CARMIL3-204ENST00000561354 LTN1O94822 1766 aa16.78■□□□□ 0.28
CARMIL3-204ENST00000561354 MTFR1LQ9H019 292 aa16.77■□□□□ 0.28
CARMIL3-204ENST00000561354 ATF5Q9Y2D1 282 aaPredicted RBP16.77■□□□□ 0.28
CARMIL3-204ENST00000561354 ACSBG1Q96GR2 724 aa16.76■□□□□ 0.27
CARMIL3-204ENST00000561354 A0A1W2PP64 1363 aa16.76■□□□□ 0.27
CARMIL3-204ENST00000561354 MYOM1P52179 1685 aa16.75■□□□□ 0.27
CARMIL3-204ENST00000561354 IP6K1Q92551 441 aa16.74■□□□□ 0.27
CARMIL3-204ENST00000561354 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
CARMIL3-204ENST00000561354 TONSLQ96HA7 1378 aa16.74■□□□□ 0.27
CARMIL3-204ENST00000561354 SYT17Q9BSW7 474 aa16.73■□□□□ 0.27
CARMIL3-204ENST00000561354 PAPPAQ13219 1627 aa16.73■□□□□ 0.27
CARMIL3-204ENST00000561354 SLC24A1O60721 1099 aa16.72■□□□□ 0.27
CARMIL3-204ENST00000561354 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
CARMIL3-204ENST00000561354 BTAF1O14981 1849 aa16.72■□□□□ 0.27
CARMIL3-204ENST00000561354 TESK2Q96S53 571 aa16.71■□□□□ 0.27
CARMIL3-204ENST00000561354 FAM208AQ9UK61 1670 aaKnown RBP16.7■□□□□ 0.26
CARMIL3-204ENST00000561354 LRRC4BQ9NT99 713 aa16.7■□□□□ 0.26
CARMIL3-204ENST00000561354 SLC27A3Q5K4L6 730 aa16.69■□□□□ 0.26
CARMIL3-204ENST00000561354 COG3Q96JB2 828 aa16.69■□□□□ 0.26
CARMIL3-204ENST00000561354 MAP3K5Q99683 1374 aa16.68■□□□□ 0.26
CARMIL3-204ENST00000561354 ZNF827Q17R98 1081 aa16.68■□□□□ 0.26
CARMIL3-204ENST00000561354 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
CARMIL3-204ENST00000561354 ARXQ96QS3 562 aa16.68■□□□□ 0.26
CARMIL3-204ENST00000561354 KAT6BQ8WYB5 2073 aa16.67■□□□□ 0.26
CARMIL3-204ENST00000561354 ST20-MTHFSA0A0A6YYL1 179 aa16.67■□□□□ 0.26
CARMIL3-204ENST00000561354 HOXC9P31274 260 aa16.67■□□□□ 0.26
CARMIL3-204ENST00000561354 SLC16A10Q8TF71 515 aa16.67■□□□□ 0.26
CARMIL3-204ENST00000561354 AKT1S1Q96B36 256 aa16.67■□□□□ 0.26
CARMIL3-204ENST00000561354 LTV1Q96GA3 475 aaPredicted RBP16.67■□□□□ 0.26
CARMIL3-204ENST00000561354 MAP3K19Q56UN5 1328 aa16.67■□□□□ 0.26
CARMIL3-204ENST00000561354 AMPHP49418 695 aa16.65■□□□□ 0.26
CARMIL3-204ENST00000561354 ANKRD36BQ8N2N9 1353 aa16.64■□□□□ 0.26
CARMIL3-204ENST00000561354 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
CARMIL3-204ENST00000561354 PRIM1P49642 420 aaKnown RBP16.63■□□□□ 0.25
CARMIL3-204ENST00000561354 ZNF784Q8NCA9 323 aaPredicted RBP16.63■□□□□ 0.25
CARMIL3-204ENST00000561354 ZCRB1Q8TBF4 217 aaKnown RBP16.63■□□□□ 0.25
CARMIL3-204ENST00000561354 RTL1A6NKG5 1358 aa16.63■□□□□ 0.25
CARMIL3-204ENST00000561354 FBLN1P23142 703 aa16.62■□□□□ 0.25
CARMIL3-204ENST00000561354 SYTL4Q96C24 671 aaPredicted RBP16.62■□□□□ 0.25
CARMIL3-204ENST00000561354 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
CARMIL3-204ENST00000561354 PNPLA7Q6ZV29 1317 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms