RNA–Protein interactions for RNA: ENST00000561338.5

ALDH1A3-207, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 4

Gene ALDH1A3, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-207ENST00000561338 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
ALDH1A3-207ENST00000561338 SOX12O15370 315 aa23.47■■□□□ 1.35
ALDH1A3-207ENST00000561338 HDGFL2Q7Z4V5 671 aaPredicted RBP23.47■■□□□ 1.35
ALDH1A3-207ENST00000561338 CRB1P82279 1406 aa23.47■■□□□ 1.35
ALDH1A3-207ENST00000561338 ZBTB7CA1YPR0 619 aa23.46■■□□□ 1.35
ALDH1A3-207ENST00000561338 TMF1P82094 1093 aa23.46■■□□□ 1.35
ALDH1A3-207ENST00000561338 ARHGEF25Q86VW2 580 aa23.46■■□□□ 1.35
ALDH1A3-207ENST00000561338 AXIN2Q9Y2T1 843 aa23.46■■□□□ 1.35
ALDH1A3-207ENST00000561338 SHANK3Q9BYB0 1731 aa23.45■■□□□ 1.34
ALDH1A3-207ENST00000561338 TERF2IPQ9NYB0 399 aa23.45■■□□□ 1.34
ALDH1A3-207ENST00000561338 MAP2P11137 1827 aaKnown RBP23.44■■□□□ 1.34
ALDH1A3-207ENST00000561338 RREB1Q92766 1687 aa23.43■■□□□ 1.34
ALDH1A3-207ENST00000561338 BLMP54132 1417 aaPredicted RBP23.42■■□□□ 1.34
ALDH1A3-207ENST00000561338 KRT27Q7Z3Y8 459 aa23.42■■□□□ 1.34
ALDH1A3-207ENST00000561338 A0A0G2JS52 829 aa23.41■■□□□ 1.34
ALDH1A3-207ENST00000561338 MYT1Q01538 1121 aa23.41■■□□□ 1.34
ALDH1A3-207ENST00000561338 KCNH5Q8NCM2 988 aa23.41■■□□□ 1.34
ALDH1A3-207ENST00000561338 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
ALDH1A3-207ENST00000561338 FAM182BQ5T319 152 aa23.4■■□□□ 1.34
ALDH1A3-207ENST00000561338 DISP2A7MBM2 1401 aa23.4■■□□□ 1.34
ALDH1A3-207ENST00000561338 HSPA5P11021 654 aaKnown RBP23.39■■□□□ 1.33
ALDH1A3-207ENST00000561338 WDR17Q8IZU2 1322 aa23.38■■□□□ 1.33
ALDH1A3-207ENST00000561338 BARGINQ6ZT62 677 aa23.38■■□□□ 1.33
ALDH1A3-207ENST00000561338 NUP188Q5SRE5 1749 aa23.38■■□□□ 1.33
ALDH1A3-207ENST00000561338 NSD3Q9BZ95 1437 aa23.37■■□□□ 1.33
ALDH1A3-207ENST00000561338 SLC24A1O60721 1099 aa23.37■■□□□ 1.33
ALDH1A3-207ENST00000561338 EVA1CP58658 441 aa23.37■■□□□ 1.33
ALDH1A3-207ENST00000561338 TCP11L2Q8N4U5 519 aa23.36■■□□□ 1.33
ALDH1A3-207ENST00000561338 RGPD3A6NKT7 1758 aaPredicted RBP23.36■■□□□ 1.33
ALDH1A3-207ENST00000561338 RGPD4Q7Z3J3 1758 aa23.36■■□□□ 1.33
ALDH1A3-207ENST00000561338 CARD14Q9BXL6 1004 aa23.34■■□□□ 1.33
ALDH1A3-207ENST00000561338 ERBB3P21860 1342 aa23.33■■□□□ 1.32
ALDH1A3-207ENST00000561338 FBLN1P23142 703 aa23.32■■□□□ 1.32
ALDH1A3-207ENST00000561338 EIF4G2P78344 907 aaKnown RBP eCLIP23.32■■□□□ 1.32
ALDH1A3-207ENST00000561338 NHSQ6T4R5 1651 aa23.32■■□□□ 1.32
ALDH1A3-207ENST00000561338 THRAP3Q9Y2W1 955 aaKnown RBP23.31■■□□□ 1.32
ALDH1A3-207ENST00000561338 FYB1O15117 783 aa23.3■■□□□ 1.32
ALDH1A3-207ENST00000561338 CDCA8Q53HL2 280 aa23.3■■□□□ 1.32
ALDH1A3-207ENST00000561338 TOM1L2Q6ZVM7 507 aa23.3■■□□□ 1.32
ALDH1A3-207ENST00000561338 DEFB132Q7Z7B7 95 aa23.3■■□□□ 1.32
ALDH1A3-207ENST00000561338 GGNBP2Q9H3C7 697 aa23.3■■□□□ 1.32
ALDH1A3-207ENST00000561338 C11orf95C9JLR9 678 aaPredicted RBP23.29■■□□□ 1.32
ALDH1A3-207ENST00000561338 TNS2Q63HR2 1409 aa23.29■■□□□ 1.32
ALDH1A3-207ENST00000561338 MAP3K19Q56UN5 1328 aa23.29■■□□□ 1.32
ALDH1A3-207ENST00000561338 DOT1LQ8TEK3 1739 aa23.28■■□□□ 1.32
ALDH1A3-207ENST00000561338 CCDC125Q86Z20 511 aa23.27■■□□□ 1.32
ALDH1A3-207ENST00000561338 COG3Q96JB2 828 aa23.27■■□□□ 1.32
ALDH1A3-207ENST00000561338 BTAF1O14981 1849 aa23.26■■□□□ 1.31
ALDH1A3-207ENST00000561338 CCDC7Q96M83 1385 aa23.26■■□□□ 1.31
ALDH1A3-207ENST00000561338 CARD10Q9BWT7 1032 aa23.25■■□□□ 1.31
ALDH1A3-207ENST00000561338 RTL1A6NKG5 1358 aa23.25■■□□□ 1.31
ALDH1A3-207ENST00000561338 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
ALDH1A3-207ENST00000561338 PKD1L3Q7Z443 1732 aa23.24■■□□□ 1.31
ALDH1A3-207ENST00000561338 ANKRD24Q8TF21 1146 aa23.23■■□□□ 1.31
ALDH1A3-207ENST00000561338 KAT6BQ8WYB5 2073 aa23.23■■□□□ 1.31
ALDH1A3-207ENST00000561338 CSB-PGBD3P0DP91 1061 aa23.22■■□□□ 1.31
ALDH1A3-207ENST00000561338 RRS1Q15050 365 aaKnown RBP23.22■■□□□ 1.31
ALDH1A3-207ENST00000561338 HOXC9P31274 260 aa23.21■■□□□ 1.31
ALDH1A3-207ENST00000561338 IP6K1Q92551 441 aa23.21■■□□□ 1.31
ALDH1A3-207ENST00000561338 POLR3GLQ9BT43 218 aa23.21■■□□□ 1.31
ALDH1A3-207ENST00000561338 MEGF6O75095 1541 aa23.2■■□□□ 1.3
ALDH1A3-207ENST00000561338 TOGARAM1Q9Y4F4 1720 aa23.19■■□□□ 1.3
ALDH1A3-207ENST00000561338 TRIM37O94972 964 aa23.18■■□□□ 1.3
ALDH1A3-207ENST00000561338 PDE3BQ13370 1112 aa23.18■■□□□ 1.3
ALDH1A3-207ENST00000561338 FAM196AQ6ZSG2 479 aa23.18■■□□□ 1.3
ALDH1A3-207ENST00000561338 BCL9O00512 1426 aa23.17■■□□□ 1.3
ALDH1A3-207ENST00000561338 DDB1Q16531 1140 aa23.17■■□□□ 1.3
ALDH1A3-207ENST00000561338 MARCH10Q8NA82 808 aaPredicted RBP23.17■■□□□ 1.3
ALDH1A3-207ENST00000561338 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
ALDH1A3-207ENST00000561338 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
ALDH1A3-207ENST00000561338 LTV1Q96GA3 475 aaPredicted RBP23.15■■□□□ 1.3
ALDH1A3-207ENST00000561338 ITGB4P16144 1822 aa23.15■■□□□ 1.3
ALDH1A3-207ENST00000561338 FLT4P35916 1363 aa23.14■■□□□ 1.3
ALDH1A3-207ENST00000561338 EN1Q05925 392 aaPredicted RBP23.14■■□□□ 1.29
ALDH1A3-207ENST00000561338 SF3B2Q13435 895 aaKnown RBP23.14■■□□□ 1.29
ALDH1A3-207ENST00000561338 PTF1AQ7RTS3 328 aa23.14■■□□□ 1.29
ALDH1A3-207ENST00000561338 LRP5O75197 1615 aa23.14■■□□□ 1.29
ALDH1A3-207ENST00000561338 NCAPD2Q15021 1401 aa23.14■■□□□ 1.29
ALDH1A3-207ENST00000561338 BAG6P46379 1132 aa23.13■■□□□ 1.29
ALDH1A3-207ENST00000561338 EMILIN1Q9Y6C2 1016 aa23.13■■□□□ 1.29
ALDH1A3-207ENST00000561338 SMG6Q86US8 1419 aaKnown RBP23.13■■□□□ 1.29
ALDH1A3-207ENST00000561338 INSRP06213 1382 aa23.13■■□□□ 1.29
ALDH1A3-207ENST00000561338 VIRMAQ69YN4 1812 aaKnown RBP23.12■■□□□ 1.29
ALDH1A3-207ENST00000561338 CGNL1Q0VF96 1302 aa23.12■■□□□ 1.29
ALDH1A3-207ENST00000561338 LY75O60449 1722 aa23.12■■□□□ 1.29
ALDH1A3-207ENST00000561338 AMPHP49418 695 aa23.12■■□□□ 1.29
ALDH1A3-207ENST00000561338 CDCA7Q9BWT1 371 aaPredicted RBP23.12■■□□□ 1.29
ALDH1A3-207ENST00000561338 PANK3Q9H999 370 aa23.12■■□□□ 1.29
ALDH1A3-207ENST00000561338 KIF24Q5T7B8 1368 aa23.12■■□□□ 1.29
ALDH1A3-207ENST00000561338 PAPPAQ13219 1627 aa23.11■■□□□ 1.29
ALDH1A3-207ENST00000561338 TUBGCP6Q96RT7 1819 aa23.11■■□□□ 1.29
ALDH1A3-207ENST00000561338 CASZ1Q86V15 1759 aa23.09■■□□□ 1.29
ALDH1A3-207ENST00000561338 IL2RBP14784 551 aa23.09■■□□□ 1.29
ALDH1A3-207ENST00000561338 EZH2Q15910 746 aaKnown RBP23.09■■□□□ 1.29
ALDH1A3-207ENST00000561338 HSP90AB2PQ58FF8 381 aa23.09■■□□□ 1.29
ALDH1A3-207ENST00000561338 CAMKK2Q96RR4 588 aa23.09■■□□□ 1.29
ALDH1A3-207ENST00000561338 USHBP1Q8N6Y0 703 aa23.07■■□□□ 1.28
ALDH1A3-207ENST00000561338 NSD2O96028 1365 aa23.06■■□□□ 1.28
ALDH1A3-207ENST00000561338 NBPF6Q5VWK0 638 aa23.06■■□□□ 1.28
ALDH1A3-207ENST00000561338 NBPF4Q96M43 638 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms