RNA–Protein interactions for RNA: ENST00000561218.5

CRTC3-212, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 3

Gene CRTC3, Length 579 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-212ENST00000561218 TERF2IPQ9NYB0 399 aa23.07■■□□□ 1.28
CRTC3-212ENST00000561218 C11orf95C9JLR9 678 aaPredicted RBP23.06■■□□□ 1.28
CRTC3-212ENST00000561218 CAMKK2Q96RR4 588 aa23.06■■□□□ 1.28
CRTC3-212ENST00000561218 DDB1Q16531 1140 aa23.05■■□□□ 1.28
CRTC3-212ENST00000561218 NME9Q86XW9 330 aa23.05■■□□□ 1.28
CRTC3-212ENST00000561218 ST20-MTHFSA0A0A6YYL1 179 aa23.04■■□□□ 1.28
CRTC3-212ENST00000561218 USP31Q70CQ4 1352 aa23.03■■□□□ 1.28
CRTC3-212ENST00000561218 TNS1Q9HBL0 1735 aaKnown RBP23.03■■□□□ 1.28
CRTC3-212ENST00000561218 SLC24A1O60721 1099 aa23.03■■□□□ 1.28
CRTC3-212ENST00000561218 R3HDM1Q15032 1099 aaKnown RBP23.03■■□□□ 1.28
CRTC3-212ENST00000561218 CDCA7Q9BWT1 371 aaPredicted RBP23.03■■□□□ 1.28
CRTC3-212ENST00000561218 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
CRTC3-212ENST00000561218 COL18A1P39060 1754 aa23.03■■□□□ 1.28
CRTC3-212ENST00000561218 CD163L1Q9NR16 1453 aa23.03■■□□□ 1.28
CRTC3-212ENST00000561218 PARD3Q8TEW0 1356 aa23.02■■□□□ 1.28
CRTC3-212ENST00000561218 TESK2Q96S53 571 aa23.02■■□□□ 1.28
CRTC3-212ENST00000561218 MON2Q7Z3U7 1717 aa23.01■■□□□ 1.27
CRTC3-212ENST00000561218 NFAT5O94916 1531 aa23.01■■□□□ 1.27
CRTC3-212ENST00000561218 PARP4Q9UKK3 1724 aaKnown RBP23■■□□□ 1.27
CRTC3-212ENST00000561218 EDC4Q6P2E9 1401 aaKnown RBP22.99■■□□□ 1.27
CRTC3-212ENST00000561218 A0A1W2PP64 1363 aa22.99■■□□□ 1.27
CRTC3-212ENST00000561218 OVOS2A0A0G2JMS6 1433 aa22.99■■□□□ 1.27
CRTC3-212ENST00000561218 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
CRTC3-212ENST00000561218 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
CRTC3-212ENST00000561218 NINLQ9Y2I6 1382 aa22.96■■□□□ 1.27
CRTC3-212ENST00000561218 EXOC5O00471 708 aa22.95■■□□□ 1.26
CRTC3-212ENST00000561218 NBPF14Q5TI25 921 aa22.95■■□□□ 1.26
CRTC3-212ENST00000561218 MARCH10Q8NA82 808 aaPredicted RBP22.95■■□□□ 1.26
CRTC3-212ENST00000561218 CCDC7Q96M83 1385 aa22.95■■□□□ 1.26
CRTC3-212ENST00000561218 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
CRTC3-212ENST00000561218 ABCC6O95255 1503 aa22.94■■□□□ 1.26
CRTC3-212ENST00000561218 RGPD5Q99666 1765 aa22.93■■□□□ 1.26
CRTC3-212ENST00000561218 LRRC37A3O60309 1634 aa22.93■■□□□ 1.26
CRTC3-212ENST00000561218 ERBB3P21860 1342 aa22.92■■□□□ 1.26
CRTC3-212ENST00000561218 TMF1P82094 1093 aa22.92■■□□□ 1.26
CRTC3-212ENST00000561218 BCL11BQ9C0K0 894 aaPredicted RBP22.92■■□□□ 1.26
CRTC3-212ENST00000561218 ANKRD24Q8TF21 1146 aa22.91■■□□□ 1.26
CRTC3-212ENST00000561218 USP47Q96K76 1375 aa22.9■■□□□ 1.26
CRTC3-212ENST00000561218 LRP5O75197 1615 aa22.9■■□□□ 1.26
CRTC3-212ENST00000561218 COG3Q96JB2 828 aa22.9■■□□□ 1.26
CRTC3-212ENST00000561218 PEAK1Q9H792 1746 aa22.89■■□□□ 1.26
CRTC3-212ENST00000561218 PLSCR1O15162 318 aa22.89■■□□□ 1.25
CRTC3-212ENST00000561218 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
CRTC3-212ENST00000561218 USP54Q70EL1 1684 aa22.89■■□□□ 1.25
CRTC3-212ENST00000561218 PTF1AQ7RTS3 328 aa22.88■■□□□ 1.25
CRTC3-212ENST00000561218 IP6K1Q92551 441 aa22.87■■□□□ 1.25
CRTC3-212ENST00000561218 TIMELESSQ9UNS1 1208 aa22.87■■□□□ 1.25
CRTC3-212ENST00000561218 BCL9O00512 1426 aa22.87■■□□□ 1.25
CRTC3-212ENST00000561218 IL2RBP14784 551 aa22.86■■□□□ 1.25
CRTC3-212ENST00000561218 CDCA8Q53HL2 280 aa22.86■■□□□ 1.25
CRTC3-212ENST00000561218 ANKRD36BQ8N2N9 1353 aa22.86■■□□□ 1.25
CRTC3-212ENST00000561218 WNK3Q9BYP7 1800 aa22.85■■□□□ 1.25
CRTC3-212ENST00000561218 LTV1Q96GA3 475 aaPredicted RBP22.84■■□□□ 1.25
CRTC3-212ENST00000561218 RREB1Q92766 1687 aa22.84■■□□□ 1.25
CRTC3-212ENST00000561218 TNS2Q63HR2 1409 aa22.83■■□□□ 1.25
CRTC3-212ENST00000561218 AMPHP49418 695 aa22.83■■□□□ 1.25
CRTC3-212ENST00000561218 LTN1O94822 1766 aa22.83■■□□□ 1.24
CRTC3-212ENST00000561218 NUP188Q5SRE5 1749 aa22.82■■□□□ 1.24
CRTC3-212ENST00000561218 MAP3K19Q56UN5 1328 aa22.82■■□□□ 1.24
CRTC3-212ENST00000561218 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
CRTC3-212ENST00000561218 SBF2Q86WG5 1849 aa22.8■■□□□ 1.24
CRTC3-212ENST00000561218 FBLN1P23142 703 aa22.8■■□□□ 1.24
CRTC3-212ENST00000561218 FYB1O15117 783 aa22.79■■□□□ 1.24
CRTC3-212ENST00000561218 KCNQ2O43526 872 aa22.79■■□□□ 1.24
CRTC3-212ENST00000561218 GGNBP2Q9H3C7 697 aa22.79■■□□□ 1.24
CRTC3-212ENST00000561218 HOXC9P31274 260 aa22.78■■□□□ 1.24
CRTC3-212ENST00000561218 PROM2Q8N271 834 aa22.78■■□□□ 1.24
CRTC3-212ENST00000561218 ACSBG1Q96GR2 724 aa22.78■■□□□ 1.24
CRTC3-212ENST00000561218 TXNRD1Q16881 649 aa22.76■■□□□ 1.23
CRTC3-212ENST00000561218 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
CRTC3-212ENST00000561218 DDX54Q8TDD1 881 aaKnown RBP22.75■■□□□ 1.23
CRTC3-212ENST00000561218 ANO8Q9HCE9 1232 aaPredicted RBP22.75■■□□□ 1.23
CRTC3-212ENST00000561218 RGPD3A6NKT7 1758 aaPredicted RBP22.75■■□□□ 1.23
CRTC3-212ENST00000561218 RGPD4Q7Z3J3 1758 aa22.75■■□□□ 1.23
CRTC3-212ENST00000561218 RRS1Q15050 365 aaKnown RBP22.74■■□□□ 1.23
CRTC3-212ENST00000561218 STK32BQ9NY57 414 aa22.72■■□□□ 1.23
CRTC3-212ENST00000561218 PPP1R1BQ9UD71 204 aaPredicted RBP22.72■■□□□ 1.23
CRTC3-212ENST00000561218 RTL1A6NKG5 1358 aa22.71■■□□□ 1.23
CRTC3-212ENST00000561218 CARD14Q9BXL6 1004 aa22.7■■□□□ 1.22
CRTC3-212ENST00000561218 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
CRTC3-212ENST00000561218 FAM208AQ9UK61 1670 aaKnown RBP22.68■■□□□ 1.22
CRTC3-212ENST00000561218 SLC15A2Q16348 729 aa22.67■■□□□ 1.22
CRTC3-212ENST00000561218 ZCRB1Q8TBF4 217 aaKnown RBP22.67■■□□□ 1.22
CRTC3-212ENST00000561218 NHSQ6T4R5 1651 aa22.67■■□□□ 1.22
CRTC3-212ENST00000561218 SMG6Q86US8 1419 aaKnown RBP22.66■■□□□ 1.22
CRTC3-212ENST00000561218 NBPF6Q5VWK0 638 aa22.66■■□□□ 1.22
CRTC3-212ENST00000561218 NBPF4Q96M43 638 aa22.66■■□□□ 1.22
CRTC3-212ENST00000561218 POLR3GLQ9BT43 218 aa22.66■■□□□ 1.22
CRTC3-212ENST00000561218 PDGFDQ9GZP0 370 aaPredicted RBP22.66■■□□□ 1.22
CRTC3-212ENST00000561218 NSD3Q9BZ95 1437 aa22.65■■□□□ 1.22
CRTC3-212ENST00000561218 HSP90AB2PQ58FF8 381 aa22.65■■□□□ 1.22
CRTC3-212ENST00000561218 ZBTB7AO95365 584 aa22.64■■□□□ 1.21
CRTC3-212ENST00000561218 USHBP1Q8N6Y0 703 aa22.64■■□□□ 1.21
CRTC3-212ENST00000561218 RAPGEF4Q8WZA2 1011 aa22.64■■□□□ 1.21
CRTC3-212ENST00000561218 SYTL4Q96C24 671 aaPredicted RBP22.64■■□□□ 1.21
CRTC3-212ENST00000561218 KAT6BQ8WYB5 2073 aa22.64■■□□□ 1.21
CRTC3-212ENST00000561218 INSRP06213 1382 aa22.63■■□□□ 1.21
CRTC3-212ENST00000561218 FLT4P35916 1363 aa22.63■■□□□ 1.21
CRTC3-212ENST00000561218 PRIM1P49642 420 aaKnown RBP22.62■■□□□ 1.21
CRTC3-212ENST00000561218 EIF4G2P78344 907 aaKnown RBP eCLIP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms