RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 TMC1Q8TDI8 760 aa38.43■■■■□ 3.74
SNRPA1-215ENST00000561187 ARHGEF25Q86VW2 580 aa38.42■■■■□ 3.74
SNRPA1-215ENST00000561187 NFAT5O94916 1531 aa38.42■■■■□ 3.74
SNRPA1-215ENST00000561187 WDR17Q8IZU2 1322 aa38.41■■■■□ 3.74
SNRPA1-215ENST00000561187 WNK3Q9BYP7 1800 aa38.41■■■■□ 3.74
SNRPA1-215ENST00000561187 CSB-PGBD3P0DP91 1061 aa38.41■■■■□ 3.74
SNRPA1-215ENST00000561187 KCNH5Q8NCM2 988 aa38.41■■■■□ 3.74
SNRPA1-215ENST00000561187 CD163L1Q9NR16 1453 aa38.38■■■■□ 3.73
SNRPA1-215ENST00000561187 RREB1Q92766 1687 aa38.38■■■■□ 3.73
SNRPA1-215ENST00000561187 OVOS2A0A0G2JMS6 1433 aa38.38■■■■□ 3.73
SNRPA1-215ENST00000561187 OVOS2A0A0J9YW53 1432 aa38.38■■■■□ 3.73
SNRPA1-215ENST00000561187 OVOS2Q6IE36 1432 aa38.38■■■■□ 3.73
SNRPA1-215ENST00000561187 DDB1Q16531 1140 aa38.37■■■■□ 3.73
SNRPA1-215ENST00000561187 NME9Q86XW9 330 aa38.37■■■■□ 3.73
SNRPA1-215ENST00000561187 NUP188Q5SRE5 1749 aa38.36■■■■□ 3.73
SNRPA1-215ENST00000561187 PEAK1Q9H792 1746 aa38.35■■■■□ 3.73
SNRPA1-215ENST00000561187 PARD3Q8TEW0 1356 aa38.34■■■■□ 3.73
SNRPA1-215ENST00000561187 SLC12A5Q9H2X9 1139 aa38.33■■■■□ 3.73
SNRPA1-215ENST00000561187 HDGFL2Q7Z4V5 671 aaPredicted RBP38.3■■■■□ 3.72
SNRPA1-215ENST00000561187 SBF2Q86WG5 1849 aa38.27■■■■□ 3.72
SNRPA1-215ENST00000561187 A0A1W2PP64 1363 aa38.27■■■■□ 3.72
SNRPA1-215ENST00000561187 PTF1AQ7RTS3 328 aa38.26■■■■□ 3.72
SNRPA1-215ENST00000561187 CARD10Q9BWT7 1032 aa38.26■■■■□ 3.72
SNRPA1-215ENST00000561187 USP31Q70CQ4 1352 aa38.26■■■■□ 3.72
SNRPA1-215ENST00000561187 LTN1O94822 1766 aa38.25■■■■□ 3.71
SNRPA1-215ENST00000561187 USP54Q70EL1 1684 aa38.25■■■■□ 3.71
SNRPA1-215ENST00000561187 MARCH10Q8NA82 808 aaPredicted RBP38.24■■■■□ 3.71
SNRPA1-215ENST00000561187 EDC4Q6P2E9 1401 aaKnown RBP38.23■■■■□ 3.71
SNRPA1-215ENST00000561187 ABCC6O95255 1503 aa38.21■■■■□ 3.71
SNRPA1-215ENST00000561187 ST20-MTHFSA0A0A6YYL1 179 aa38.2■■■■□ 3.71
SNRPA1-215ENST00000561187 TRIM26Q12899 539 aaPredicted RBP38.2■■■■□ 3.71
SNRPA1-215ENST00000561187 NBPF14Q5TI25 921 aa38.2■■■■□ 3.71
SNRPA1-215ENST00000561187 CDCA7Q9BWT1 371 aaPredicted RBP38.2■■■■□ 3.71
SNRPA1-215ENST00000561187 TERF2IPQ9NYB0 399 aa38.2■■■■□ 3.71
SNRPA1-215ENST00000561187 C11orf95C9JLR9 678 aaPredicted RBP38.19■■■■□ 3.7
SNRPA1-215ENST00000561187 CCDC7Q96M83 1385 aa38.18■■■■□ 3.7
SNRPA1-215ENST00000561187 TESK2Q96S53 571 aa38.17■■■■□ 3.7
SNRPA1-215ENST00000561187 NLRP2Q9NX02 1062 aa38.17■■■■□ 3.7
SNRPA1-215ENST00000561187 ERBB3P21860 1342 aa38.15■■■■□ 3.7
SNRPA1-215ENST00000561187 TNS2Q63HR2 1409 aa38.14■■■■□ 3.7
SNRPA1-215ENST00000561187 EXOC5O00471 708 aa38.13■■■■□ 3.69
SNRPA1-215ENST00000561187 BCL11BQ9C0K0 894 aaPredicted RBP38.13■■■■□ 3.69
SNRPA1-215ENST00000561187 RGPD3A6NKT7 1758 aaPredicted RBP38.11■■■■□ 3.69
SNRPA1-215ENST00000561187 RGPD4Q7Z3J3 1758 aa38.11■■■■□ 3.69
SNRPA1-215ENST00000561187 ANKRD24Q8TF21 1146 aa38.11■■■■□ 3.69
SNRPA1-215ENST00000561187 ANO8Q9HCE9 1232 aaPredicted RBP38.09■■■■□ 3.69
SNRPA1-215ENST00000561187 PLSCR1O15162 318 aa38.06■■■■□ 3.68
SNRPA1-215ENST00000561187 PUS7Q96PZ0 661 aaKnown RBP38.06■■■■□ 3.68
SNRPA1-215ENST00000561187 BCL9O00512 1426 aa38.05■■■■□ 3.68
SNRPA1-215ENST00000561187 LTV1Q96GA3 475 aaPredicted RBP38.05■■■■□ 3.68
SNRPA1-215ENST00000561187 ACSBG1Q96GR2 724 aa38.04■■■■□ 3.68
SNRPA1-215ENST00000561187 NINLQ9Y2I6 1382 aa38.04■■■■□ 3.68
SNRPA1-215ENST00000561187 USP47Q96K76 1375 aa38.03■■■■□ 3.68
SNRPA1-215ENST00000561187 KCNQ2O43526 872 aa38.02■■■■□ 3.68
SNRPA1-215ENST00000561187 IL2RBP14784 551 aa38.02■■■■□ 3.68
SNRPA1-215ENST00000561187 FBLN1P23142 703 aa38.01■■■■□ 3.68
SNRPA1-215ENST00000561187 PROM2Q8N271 834 aa37.99■■■■□ 3.67
SNRPA1-215ENST00000561187 COG3Q96JB2 828 aa37.99■■■■□ 3.67
SNRPA1-215ENST00000561187 NHSQ6T4R5 1651 aa37.98■■■■□ 3.67
SNRPA1-215ENST00000561187 ANKRD36BQ8N2N9 1353 aa37.95■■■■□ 3.67
SNRPA1-215ENST00000561187 IP6K1Q92551 441 aa37.95■■■■□ 3.67
SNRPA1-215ENST00000561187 PPP1R1BQ9UD71 204 aaPredicted RBP37.95■■■■□ 3.67
SNRPA1-215ENST00000561187 MAP3K19Q56UN5 1328 aa37.94■■■■□ 3.66
SNRPA1-215ENST00000561187 TXNRD1Q16881 649 aa37.94■■■■□ 3.66
SNRPA1-215ENST00000561187 PDGFDQ9GZP0 370 aaPredicted RBP37.94■■■■□ 3.66
SNRPA1-215ENST00000561187 SPON1Q9HCB6 807 aa37.94■■■■□ 3.66
SNRPA1-215ENST00000561187 TMF1P82094 1093 aa37.93■■■■□ 3.66
SNRPA1-215ENST00000561187 KAT6BQ8WYB5 2073 aa37.92■■■■□ 3.66
SNRPA1-215ENST00000561187 CASZ1Q86V15 1759 aa37.91■■■■□ 3.66
SNRPA1-215ENST00000561187 AMPHP49418 695 aa37.9■■■■□ 3.66
SNRPA1-215ENST00000561187 FAM208AQ9UK61 1670 aaKnown RBP37.89■■■■□ 3.66
SNRPA1-215ENST00000561187 GGNBP2Q9H3C7 697 aa37.89■■■■□ 3.66
SNRPA1-215ENST00000561187 HOXC9P31274 260 aa37.88■■■■□ 3.65
SNRPA1-215ENST00000561187 SLC24A1O60721 1099 aa37.87■■■■□ 3.65
SNRPA1-215ENST00000561187 RGPD2P0DJD1 1756 aa37.87■■■■□ 3.65
SNRPA1-215ENST00000561187 BTAF1O14981 1849 aa37.87■■■■□ 3.65
SNRPA1-215ENST00000561187 ZBTB7AO95365 584 aa37.86■■■■□ 3.65
SNRPA1-215ENST00000561187 RRS1Q15050 365 aaKnown RBP37.86■■■■□ 3.65
SNRPA1-215ENST00000561187 STK32BQ9NY57 414 aa37.86■■■■□ 3.65
SNRPA1-215ENST00000561187 DDX54Q8TDD1 881 aaKnown RBP37.85■■■■□ 3.65
SNRPA1-215ENST00000561187 PCGF6Q9BYE7 350 aa37.81■■■■□ 3.64
SNRPA1-215ENST00000561187 FYB1O15117 783 aa37.8■■■■□ 3.64
SNRPA1-215ENST00000561187 KIF20BQ96Q89 1820 aa37.8■■■■□ 3.64
SNRPA1-215ENST00000561187 SLC15A2Q16348 729 aa37.79■■■■□ 3.64
SNRPA1-215ENST00000561187 USHBP1Q8N6Y0 703 aa37.77■■■■□ 3.64
SNRPA1-215ENST00000561187 ATF5Q9Y2D1 282 aaPredicted RBP37.77■■■■□ 3.64
SNRPA1-215ENST00000561187 MEGF6O75095 1541 aa37.77■■■■□ 3.64
SNRPA1-215ENST00000561187 MYOM1P52179 1685 aa37.76■■■■□ 3.63
SNRPA1-215ENST00000561187 RTL1A6NKG5 1358 aa37.75■■■■□ 3.63
SNRPA1-215ENST00000561187 SYTL4Q96C24 671 aaPredicted RBP37.74■■■■□ 3.63
SNRPA1-215ENST00000561187 PAPPAQ13219 1627 aa37.73■■■■□ 3.63
SNRPA1-215ENST00000561187 DOT1LQ8TEK3 1739 aa37.73■■■■□ 3.63
SNRPA1-215ENST00000561187 CDCA8Q53HL2 280 aa37.72■■■■□ 3.63
SNRPA1-215ENST00000561187 SHANK3Q9BYB0 1731 aa37.72■■■■□ 3.63
SNRPA1-215ENST00000561187 NSD3Q9BZ95 1437 aa37.7■■■■□ 3.62
SNRPA1-215ENST00000561187 NBPF6Q5VWK0 638 aa37.69■■■■□ 3.62
SNRPA1-215ENST00000561187 NBPF4Q96M43 638 aa37.69■■■■□ 3.62
SNRPA1-215ENST00000561187 ZNF827Q17R98 1081 aa37.68■■■■□ 3.62
SNRPA1-215ENST00000561187 LRRC4BQ9NT99 713 aa37.68■■■■□ 3.62
SNRPA1-215ENST00000561187 SMG6Q86US8 1419 aaKnown RBP37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms