RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 QTRT2Q9H974 415 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-221ENST00000561055 GLI3P10071 1580 aa13.2□□□□□ -0.3
RABGGTA-221ENST00000561055 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
RABGGTA-221ENST00000561055 COL5A2P05997 1499 aaPredicted RBP13.19□□□□□ -0.3
RABGGTA-221ENST00000561055 VPS72Q15906 364 aa13.19□□□□□ -0.3
RABGGTA-221ENST00000561055 RGPD2P0DJD1 1756 aa13.19□□□□□ -0.3
RABGGTA-221ENST00000561055 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
RABGGTA-221ENST00000561055 CDK12Q9NYV4 1490 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-221ENST00000561055 IP6K1Q92551 441 aa13.18□□□□□ -0.3
RABGGTA-221ENST00000561055 AXIN2Q9Y2T1 843 aa13.18□□□□□ -0.3
RABGGTA-221ENST00000561055 BLMP54132 1417 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-221ENST00000561055 RTL1A6NKG5 1358 aa13.18□□□□□ -0.3
RABGGTA-221ENST00000561055 MAP3K19Q56UN5 1328 aa13.17□□□□□ -0.3
RABGGTA-221ENST00000561055 SOX12O15370 315 aa13.17□□□□□ -0.3
RABGGTA-221ENST00000561055 RBM6P78332 1123 aaKnown RBP13.17□□□□□ -0.3
RABGGTA-221ENST00000561055 GJD4Q96KN9 370 aaPredicted RBP13.17□□□□□ -0.3
RABGGTA-221ENST00000561055 BRWD3Q6RI45 1802 aa13.17□□□□□ -0.3
RABGGTA-221ENST00000561055 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
RABGGTA-221ENST00000561055 FBLN1P23142 703 aa13.16□□□□□ -0.3
RABGGTA-221ENST00000561055 SPATA31A5Q5VU36 1347 aa13.15□□□□□ -0.3
RABGGTA-221ENST00000561055 SPATA31A7Q8IWB4 1347 aa13.15□□□□□ -0.3
RABGGTA-221ENST00000561055 SMG6Q86US8 1419 aaKnown RBP13.15□□□□□ -0.3
RABGGTA-221ENST00000561055 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-221ENST00000561055 RXRBP28702 533 aa13.15□□□□□ -0.3
RABGGTA-221ENST00000561055 WDR17Q8IZU2 1322 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 CRB1P82279 1406 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 HOXC9P31274 260 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 EVA1CP58658 441 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 POLKQ9UBT6 870 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 INSRP06213 1382 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 FLT4P35916 1363 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 THSD7AQ9UPZ6 1657 aa13.14□□□□□ -0.31
RABGGTA-221ENST00000561055 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
RABGGTA-221ENST00000561055 RRS1Q15050 365 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-221ENST00000561055 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
RABGGTA-221ENST00000561055 ERBB3P21860 1342 aa13.13□□□□□ -0.31
RABGGTA-221ENST00000561055 AMPHP49418 695 aa13.12□□□□□ -0.31
RABGGTA-221ENST00000561055 DDX10Q13206 875 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-221ENST00000561055 LARP1Q6PKG0 1096 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-221ENST00000561055 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
RABGGTA-221ENST00000561055 THRAP3Q9Y2W1 955 aaKnown RBP13.12□□□□□ -0.31
RABGGTA-221ENST00000561055 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
RABGGTA-221ENST00000561055 CC2D1BQ5T0F9 858 aaKnown RBP13.11□□□□□ -0.31
RABGGTA-221ENST00000561055 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
RABGGTA-221ENST00000561055 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
RABGGTA-221ENST00000561055 EMILIN1Q9Y6C2 1016 aa13.11□□□□□ -0.31
RABGGTA-221ENST00000561055 ANKRD24Q8TF21 1146 aa13.1□□□□□ -0.31
RABGGTA-221ENST00000561055 RGS12O14924 1447 aa13.09□□□□□ -0.31
RABGGTA-221ENST00000561055 RGPD1P0DJD0 1748 aa13.09□□□□□ -0.31
RABGGTA-221ENST00000561055 HSP90AB2PQ58FF8 381 aa13.09□□□□□ -0.31
RABGGTA-221ENST00000561055 TCP11L2Q8N4U5 519 aa13.09□□□□□ -0.31
RABGGTA-221ENST00000561055 CCDC9Q9Y3X0 531 aaKnown RBP13.09□□□□□ -0.31
RABGGTA-221ENST00000561055 NCAPD2Q15021 1401 aa13.08□□□□□ -0.32
RABGGTA-221ENST00000561055 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.32
RABGGTA-221ENST00000561055 TOM1L2Q6ZVM7 507 aa13.08□□□□□ -0.32
RABGGTA-221ENST00000561055 PARD3Q8TEW0 1356 aa13.07□□□□□ -0.32
RABGGTA-221ENST00000561055 DISP2A7MBM2 1401 aa13.06□□□□□ -0.32
RABGGTA-221ENST00000561055 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
RABGGTA-221ENST00000561055 MTHFSP49914 203 aa13.06□□□□□ -0.32
RABGGTA-221ENST00000561055 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-221ENST00000561055 LRRC37A3O60309 1634 aa13.06□□□□□ -0.32
RABGGTA-221ENST00000561055 SBF2Q86WG5 1849 aa13.05□□□□□ -0.32
RABGGTA-221ENST00000561055 FAM98CQ17RN3 349 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-221ENST00000561055 SHANK3Q9BYB0 1731 aa13.05□□□□□ -0.32
RABGGTA-221ENST00000561055 PPM1GO15355 546 aaPredicted RBP13.04□□□□□ -0.32
RABGGTA-221ENST00000561055 RALBP1Q15311 655 aa13.04□□□□□ -0.32
RABGGTA-221ENST00000561055 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
RABGGTA-221ENST00000561055 NLRP2Q9NX02 1062 aa13.04□□□□□ -0.32
RABGGTA-221ENST00000561055 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 EIF4A2Q14240 407 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 NBPF6Q5VWK0 638 aa13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 LTV1Q96GA3 475 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 NBPF4Q96M43 638 aa13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 COL3A1P02461 1466 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-221ENST00000561055 EYA1Q99502 592 aa13.02□□□□□ -0.33
RABGGTA-221ENST00000561055 PLEKHG2Q9H7P9 1386 aa13.02□□□□□ -0.33
RABGGTA-221ENST00000561055 KAT6BQ8WYB5 2073 aa13.01□□□□□ -0.33
RABGGTA-221ENST00000561055 IL2RBP14784 551 aa13.01□□□□□ -0.33
RABGGTA-221ENST00000561055 IL13P35225 146 aa13.01□□□□□ -0.33
RABGGTA-221ENST00000561055 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
RABGGTA-221ENST00000561055 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
RABGGTA-221ENST00000561055 KRT27Q7Z3Y8 459 aa13□□□□□ -0.33
RABGGTA-221ENST00000561055 EP400Q96L91 3159 aa13□□□□□ -0.33
RABGGTA-221ENST00000561055 TNS2Q63HR2 1409 aa12.99□□□□□ -0.33
RABGGTA-221ENST00000561055 CNGB1Q14028 1251 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-221ENST00000561055 PRKRIP1Q9H875 184 aaPredicted RBP12.99□□□□□ -0.33
RABGGTA-221ENST00000561055 MEGF6O75095 1541 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 OVOS2A0A0G2JMS6 1433 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 BCL9O00512 1426 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 KDRP35968 1356 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 MYBBP1AQ9BQG0 1328 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 EXOC5O00471 708 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 DIAPH1O60610 1272 aaKnown RBP12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 DDB1Q16531 1140 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 CFAP53Q96M91 514 aa12.98□□□□□ -0.33
RABGGTA-221ENST00000561055 A0A0G2JS52 829 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms