RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 WDR97A6NE52 1622 aa7.23□□□□□ -1.25
HERC1-211ENST00000560983 MAPKBP1O60336 1514 aa7.22□□□□□ -1.25
HERC1-211ENST00000560983 CLK2P49760 499 aaKnown RBP7.22□□□□□ -1.25
HERC1-211ENST00000560983 C4orf48Q5BLP8 95 aa7.22□□□□□ -1.25
HERC1-211ENST00000560983 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
HERC1-211ENST00000560983 KLF16Q9BXK1 252 aaPredicted RBP7.22□□□□□ -1.25
HERC1-211ENST00000560983 WASF2Q9Y6W5 498 aa7.22□□□□□ -1.25
HERC1-211ENST00000560983 PRG4Q92954 1404 aaPredicted RBP7.21□□□□□ -1.25
HERC1-211ENST00000560983 PLEKHG3A1L390 1219 aa7.21□□□□□ -1.26
HERC1-211ENST00000560983 CTHP32929 405 aa7.21□□□□□ -1.26
HERC1-211ENST00000560983 PRDM2Q13029 1718 aa7.21□□□□□ -1.26
HERC1-211ENST00000560983 GRIN2AQ12879 1464 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 CAPN5O15484 640 aaPredicted RBP7.2□□□□□ -1.26
HERC1-211ENST00000560983 WIPF1O43516 503 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 WFS1O76024 890 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 NNTQ13423 1086 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 CSPP1Q1MSJ5 1256 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 RTL5Q5HYW3 569 aaPredicted RBP7.2□□□□□ -1.26
HERC1-211ENST00000560983 SH3RF1Q7Z6J0 888 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 FAM174AQ8TBP5 190 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 FOXJ1Q92949 421 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 C1QTNF2Q9BXJ5 285 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 RSPH6AQ9H0K4 717 aa7.2□□□□□ -1.26
HERC1-211ENST00000560983 TIMP2P16035 220 aa7.19□□□□□ -1.26
HERC1-211ENST00000560983 TERTO14746 1132 aaKnown RBP7.18□□□□□ -1.26
HERC1-211ENST00000560983 ADH1CP00326 375 aa7.18□□□□□ -1.26
HERC1-211ENST00000560983 BMP1P13497 986 aa7.18□□□□□ -1.26
HERC1-211ENST00000560983 SHROOM2Q13796 1616 aa7.18□□□□□ -1.26
HERC1-211ENST00000560983 SH3D19Q5HYK7 790 aa7.17□□□□□ -1.26
HERC1-211ENST00000560983 SH3BP5LQ7L8J4 393 aa7.17□□□□□ -1.26
HERC1-211ENST00000560983 ARMC2Q8NEN0 867 aa7.17□□□□□ -1.26
HERC1-211ENST00000560983 NUTM2BA6NNL0 878 aaPredicted RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 NUTM2EB1AL46 878 aaPredicted RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 GRM5P41594 1212 aa7.16□□□□□ -1.26
HERC1-211ENST00000560983 NUTM2DQ5VT03 806 aaPredicted RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 FBXO31Q5XUX0 539 aaPredicted RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 BPHLQ86WA6 291 aaPredicted RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 NUTM2AQ8IVF1 878 aaPredicted RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 TRMT44Q8IYL2 757 aaKnown RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 HELBQ8NG08 1087 aaPredicted RBP7.16□□□□□ -1.26
HERC1-211ENST00000560983 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.16□□□□□ -1.26
HERC1-211ENST00000560983 NR5A1Q13285 461 aa7.15□□□□□ -1.26
HERC1-211ENST00000560983 SKIV2LQ15477 1246 aaKnown RBP7.15□□□□□ -1.26
HERC1-211ENST00000560983 PPP2R2DQ66LE6 453 aa7.15□□□□□ -1.26
HERC1-211ENST00000560983 GPKOWQ92917 476 aaPredicted RBP eCLIP7.15□□□□□ -1.26
HERC1-211ENST00000560983 MAP4K5Q9Y4K4 846 aa7.15□□□□□ -1.26
HERC1-211ENST00000560983 CUX1P39880 1505 aa7.15□□□□□ -1.27
HERC1-211ENST00000560983 NR3C2P08235 984 aa7.14□□□□□ -1.27
HERC1-211ENST00000560983 NBPF14Q5TI25 921 aa7.14□□□□□ -1.27
HERC1-211ENST00000560983 NPAS3Q8IXF0 933 aa7.14□□□□□ -1.27
HERC1-211ENST00000560983 ZFP42Q96MM3 310 aa7.14□□□□□ -1.27
HERC1-211ENST00000560983 KDM4CQ9H3R0 1056 aa7.14□□□□□ -1.27
HERC1-211ENST00000560983 POLR3EQ9NVU0 708 aa7.14□□□□□ -1.27
HERC1-211ENST00000560983 ABCA10Q8WWZ4 1543 aa7.13□□□□□ -1.27
HERC1-211ENST00000560983 WDR4P57081 412 aaKnown RBP7.13□□□□□ -1.27
HERC1-211ENST00000560983 CTDSPL2Q05D32 466 aa7.13□□□□□ -1.27
HERC1-211ENST00000560983 MRPL14Q6P1L8 145 aaKnown RBP7.13□□□□□ -1.27
HERC1-211ENST00000560983 ADCY10Q96PN6 1610 aa7.12□□□□□ -1.27
HERC1-211ENST00000560983 FHAD1B1AJZ9 1412 aa7.12□□□□□ -1.27
HERC1-211ENST00000560983 TSC1Q92574 1164 aa7.12□□□□□ -1.27
HERC1-211ENST00000560983 BCANQ96GW7 911 aa7.12□□□□□ -1.27
HERC1-211ENST00000560983 DDRGK1Q96HY6 314 aa7.12□□□□□ -1.27
HERC1-211ENST00000560983 FAM117AQ9C073 453 aa7.12□□□□□ -1.27
HERC1-211ENST00000560983 GPBP1L1Q9HC44 474 aaPredicted RBP7.12□□□□□ -1.27
HERC1-211ENST00000560983 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
HERC1-211ENST00000560983 TSPOAP1O95153 1857 aa7.11□□□□□ -1.27
HERC1-211ENST00000560983 ITPKCQ96DU7 683 aa7.11□□□□□ -1.27
HERC1-211ENST00000560983 H3BM21 787 aa7.1□□□□□ -1.27
HERC1-211ENST00000560983 PDXDC2PQ6P474 469 aa7.1□□□□□ -1.27
HERC1-211ENST00000560983 PROCA1Q8NCQ7 364 aaPredicted RBP7.1□□□□□ -1.27
HERC1-211ENST00000560983 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
HERC1-211ENST00000560983 ABCA5Q8WWZ7 1642 aa7.09□□□□□ -1.27
HERC1-211ENST00000560983 ZC3H4Q9UPT8 1303 aaKnown RBP7.09□□□□□ -1.27
HERC1-211ENST00000560983 ZIC2O95409 532 aaPredicted RBP7.09□□□□□ -1.27
HERC1-211ENST00000560983 AGERQ15109 404 aa7.09□□□□□ -1.27
HERC1-211ENST00000560983 ERFEQ4G0M1 354 aa7.09□□□□□ -1.27
HERC1-211ENST00000560983 MEIOBQ8N635 442 aa7.09□□□□□ -1.27
HERC1-211ENST00000560983 LRRN4Q8WUT4 740 aa7.09□□□□□ -1.27
HERC1-211ENST00000560983 PBRM1Q86U86 1689 aa7.09□□□□□ -1.27
HERC1-211ENST00000560983 TOP2BQ02880 1626 aa7.09□□□□□ -1.28
HERC1-211ENST00000560983 GLI2P10070 1586 aa7.08□□□□□ -1.28
HERC1-211ENST00000560983 ARID5BQ14865 1188 aa7.08□□□□□ -1.28
HERC1-211ENST00000560983 PURBQ96QR8 312 aaKnown RBP7.08□□□□□ -1.28
HERC1-211ENST00000560983 OCSTAMPQ9BR26 566 aa7.08□□□□□ -1.28
HERC1-211ENST00000560983 PPRC1Q5VV67 1664 aaKnown RBP7.08□□□□□ -1.28
HERC1-211ENST00000560983 ASXL2Q76L83 1435 aa7.08□□□□□ -1.28
HERC1-211ENST00000560983 ADAMTS12P58397 1594 aa7.08□□□□□ -1.28
HERC1-211ENST00000560983 PTPRMP28827 1452 aa7.07□□□□□ -1.28
HERC1-211ENST00000560983 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
HERC1-211ENST00000560983 HSPA2P54652 639 aa7.07□□□□□ -1.28
HERC1-211ENST00000560983 INSM1Q01101 510 aaPredicted RBP7.07□□□□□ -1.28
HERC1-211ENST00000560983 SCARF1Q14162 830 aa7.07□□□□□ -1.28
HERC1-211ENST00000560983 FKBPLQ9UIM3 349 aa7.07□□□□□ -1.28
HERC1-211ENST00000560983 PLB1Q6P1J6 1458 aa7.06□□□□□ -1.28
HERC1-211ENST00000560983 FSHRP23945 695 aa7.06□□□□□ -1.28
HERC1-211ENST00000560983 SLC16A10Q8TF71 515 aa7.06□□□□□ -1.28
HERC1-211ENST00000560983 STK17AQ9UEE5 414 aa7.06□□□□□ -1.28
HERC1-211ENST00000560983 VSIG8P0DPA2 414 aa7.05□□□□□ -1.28
HERC1-211ENST00000560983 NR6A1Q15406 480 aa7.05□□□□□ -1.28
HERC1-211ENST00000560983 VASH1Q7L8A9 365 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms