RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZBTB7CA1YPR0 619 aa26.84■■□□□ 1.89
TPM1-226ENST00000560959 MARCH10Q8NA82 808 aaPredicted RBP26.84■■□□□ 1.89
TPM1-226ENST00000560959 AXIN2Q9Y2T1 843 aa26.84■■□□□ 1.89
TPM1-226ENST00000560959 PTF1AQ7RTS3 328 aa26.82■■□□□ 1.88
TPM1-226ENST00000560959 ARHGEF25Q86VW2 580 aa26.82■■□□□ 1.88
TPM1-226ENST00000560959 KCNH5Q8NCM2 988 aa26.82■■□□□ 1.88
TPM1-226ENST00000560959 ZNF692Q9BU19 519 aaPredicted RBP26.82■■□□□ 1.88
TPM1-226ENST00000560959 LRRC37A3O60309 1634 aa26.82■■□□□ 1.88
TPM1-226ENST00000560959 SBF2Q86WG5 1849 aa26.81■■□□□ 1.88
TPM1-226ENST00000560959 CARD10Q9BWT7 1032 aa26.81■■□□□ 1.88
TPM1-226ENST00000560959 PTGER2P43116 358 aa26.79■■□□□ 1.88
TPM1-226ENST00000560959 COL18A1P39060 1754 aa26.79■■□□□ 1.88
TPM1-226ENST00000560959 CASZ1Q86V15 1759 aa26.79■■□□□ 1.88
TPM1-226ENST00000560959 CPSF1Q10570 1443 aaKnown RBP26.77■■□□□ 1.88
TPM1-226ENST00000560959 EVC2Q86UK5 1308 aa26.77■■□□□ 1.88
TPM1-226ENST00000560959 EXOC5O00471 708 aa26.77■■□□□ 1.88
TPM1-226ENST00000560959 TXNRD1Q16881 649 aa26.77■■□□□ 1.88
TPM1-226ENST00000560959 PDGFDQ9GZP0 370 aaPredicted RBP26.77■■□□□ 1.88
TPM1-226ENST00000560959 STK32BQ9NY57 414 aa26.77■■□□□ 1.88
TPM1-226ENST00000560959 ZBTB7AO95365 584 aa26.75■■□□□ 1.87
TPM1-226ENST00000560959 SLC15A2Q16348 729 aa26.75■■□□□ 1.87
TPM1-226ENST00000560959 TTC21BQ7Z4L5 1316 aa26.74■■□□□ 1.87
TPM1-226ENST00000560959 TTC21AQ8NDW8 1320 aa26.73■■□□□ 1.87
TPM1-226ENST00000560959 CSB-PGBD3P0DP91 1061 aa26.72■■□□□ 1.87
TPM1-226ENST00000560959 PIK3C2AO00443 1686 aa26.72■■□□□ 1.87
TPM1-226ENST00000560959 CCDC7Q96M83 1385 aa26.71■■□□□ 1.87
TPM1-226ENST00000560959 MTFR1LQ9H019 292 aa26.71■■□□□ 1.87
TPM1-226ENST00000560959 ATF5Q9Y2D1 282 aaPredicted RBP26.71■■□□□ 1.87
TPM1-226ENST00000560959 QRICH2Q9H0J4 1663 aa26.7■■□□□ 1.87
TPM1-226ENST00000560959 UTRNP46939 3433 aa26.7■■□□□ 1.87
TPM1-226ENST00000560959 SYT17Q9BSW7 474 aa26.7■■□□□ 1.86
TPM1-226ENST00000560959 WNK3Q9BYP7 1800 aa26.68■■□□□ 1.86
TPM1-226ENST00000560959 ZNF784Q8NCA9 323 aaPredicted RBP26.68■■□□□ 1.86
TPM1-226ENST00000560959 SGIP1Q9BQI5 828 aa26.68■■□□□ 1.86
TPM1-226ENST00000560959 FHDC1Q9C0D6 1143 aaPredicted RBP26.67■■□□□ 1.86
TPM1-226ENST00000560959 AKAP12Q02952 1782 aa26.66■■□□□ 1.86
TPM1-226ENST00000560959 ABCC6O95255 1503 aa26.65■■□□□ 1.86
TPM1-226ENST00000560959 TNS2Q63HR2 1409 aa26.64■■□□□ 1.85
TPM1-226ENST00000560959 L3MBTL2Q969R5 705 aa26.63■■□□□ 1.85
TPM1-226ENST00000560959 TRPM1Q7Z4N2 1603 aa26.63■■□□□ 1.85
TPM1-226ENST00000560959 MYOM1P52179 1685 aa26.63■■□□□ 1.85
TPM1-226ENST00000560959 NFAT5O94916 1531 aa26.62■■□□□ 1.85
TPM1-226ENST00000560959 SOX12O15370 315 aa26.62■■□□□ 1.85
TPM1-226ENST00000560959 MAP3K5Q99683 1374 aa26.6■■□□□ 1.85
TPM1-226ENST00000560959 KTN1Q86UP2 1357 aaKnown RBP26.59■■□□□ 1.85
TPM1-226ENST00000560959 ARXQ96QS3 562 aa26.59■■□□□ 1.85
TPM1-226ENST00000560959 USP31Q70CQ4 1352 aa26.58■■□□□ 1.85
TPM1-226ENST00000560959 ERBB3P21860 1342 aa26.58■■□□□ 1.85
TPM1-226ENST00000560959 RGPD5Q99666 1765 aa26.58■■□□□ 1.85
TPM1-226ENST00000560959 IL2RBP14784 551 aa26.57■■□□□ 1.84
TPM1-226ENST00000560959 ACSBG1Q96GR2 724 aa26.55■■□□□ 1.84
TPM1-226ENST00000560959 NLRP2Q9NX02 1062 aa26.55■■□□□ 1.84
TPM1-226ENST00000560959 NHSQ6T4R5 1651 aa26.54■■□□□ 1.84
TPM1-226ENST00000560959 ROCK2O75116 1388 aaKnown RBP26.54■■□□□ 1.84
TPM1-226ENST00000560959 SLC16A10Q8TF71 515 aa26.53■■□□□ 1.84
TPM1-226ENST00000560959 SBNO2Q9Y2G9 1366 aa26.5■■□□□ 1.83
TPM1-226ENST00000560959 C1QTNF8P60827 252 aa26.5■■□□□ 1.83
TPM1-226ENST00000560959 PAPPAQ13219 1627 aa26.5■■□□□ 1.83
TPM1-226ENST00000560959 SLC27A3Q5K4L6 730 aa26.49■■□□□ 1.83
TPM1-226ENST00000560959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.49■■□□□ 1.83
TPM1-226ENST00000560959 LRRC4BQ9NT99 713 aa26.49■■□□□ 1.83
TPM1-226ENST00000560959 ZNF827Q17R98 1081 aa26.48■■□□□ 1.83
TPM1-226ENST00000560959 ANKRD24Q8TF21 1146 aa26.48■■□□□ 1.83
TPM1-226ENST00000560959 AKT1S1Q96B36 256 aa26.48■■□□□ 1.83
TPM1-226ENST00000560959 CHD4Q14839 1912 aa26.47■■□□□ 1.83
TPM1-226ENST00000560959 USP54Q70EL1 1684 aa26.45■■□□□ 1.82
TPM1-226ENST00000560959 NME9Q86XW9 330 aa26.45■■□□□ 1.82
TPM1-226ENST00000560959 SENP3-EIF4A1A0A087X0R7 540 aa26.44■■□□□ 1.82
TPM1-226ENST00000560959 GPR162Q16538 588 aa26.44■■□□□ 1.82
TPM1-226ENST00000560959 MON2Q7Z3U7 1717 aa26.44■■□□□ 1.82
TPM1-226ENST00000560959 POLD1P28340 1107 aa26.43■■□□□ 1.82
TPM1-226ENST00000560959 HDGFL2Q7Z4V5 671 aaPredicted RBP26.43■■□□□ 1.82
TPM1-226ENST00000560959 CD163L1Q9NR16 1453 aa26.42■■□□□ 1.82
TPM1-226ENST00000560959 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
TPM1-226ENST00000560959 BTAF1O14981 1849 aa26.41■■□□□ 1.82
TPM1-226ENST00000560959 IP6K1Q92551 441 aa26.4■■□□□ 1.82
TPM1-226ENST00000560959 PUS7Q96PZ0 661 aaKnown RBP26.4■■□□□ 1.82
TPM1-226ENST00000560959 EDC4Q6P2E9 1401 aaKnown RBP26.39■■□□□ 1.82
TPM1-226ENST00000560959 TMC1Q8TDI8 760 aa26.38■■□□□ 1.81
TPM1-226ENST00000560959 SLC12A5Q9H2X9 1139 aa26.38■■□□□ 1.81
TPM1-226ENST00000560959 TERF2IPQ9NYB0 399 aa26.38■■□□□ 1.81
TPM1-226ENST00000560959 PNPLA7Q6ZV29 1317 aa26.38■■□□□ 1.81
TPM1-226ENST00000560959 DDX54Q8TDD1 881 aaKnown RBP26.37■■□□□ 1.81
TPM1-226ENST00000560959 TFCP2L1Q9NZI6 479 aa26.36■■□□□ 1.81
TPM1-226ENST00000560959 NEUROD1Q13562 356 aa26.35■■□□□ 1.81
TPM1-226ENST00000560959 QSER1Q2KHR3 1735 aa26.34■■□□□ 1.81
TPM1-226ENST00000560959 LTN1O94822 1766 aa26.34■■□□□ 1.81
TPM1-226ENST00000560959 COL24A1Q17RW2 1714 aa26.34■■□□□ 1.81
TPM1-226ENST00000560959 ANKRD36BQ8N2N9 1353 aa26.33■■□□□ 1.81
TPM1-226ENST00000560959 GOLGB1Q14789 3259 aaKnown RBP26.33■■□□□ 1.81
TPM1-226ENST00000560959 GIGYF1O75420 1035 aaPredicted RBP26.32■■□□□ 1.8
TPM1-226ENST00000560959 PRIM1P49642 420 aaKnown RBP26.32■■□□□ 1.8
TPM1-226ENST00000560959 CARD11Q9BXL7 1154 aa26.32■■□□□ 1.8
TPM1-226ENST00000560959 KAT6BQ8WYB5 2073 aa26.31■■□□□ 1.8
TPM1-226ENST00000560959 GRIN3BO60391 1043 aa26.3■■□□□ 1.8
TPM1-226ENST00000560959 KLHL34Q8N239 644 aa26.3■■□□□ 1.8
TPM1-226ENST00000560959 A0A1W2PP64 1363 aa26.3■■□□□ 1.8
TPM1-226ENST00000560959 SYTL4Q96C24 671 aaPredicted RBP26.29■■□□□ 1.8
TPM1-226ENST00000560959 HMGB2P26583 209 aaKnown RBP26.28■■□□□ 1.8
TPM1-226ENST00000560959 ZCRB1Q8TBF4 217 aaKnown RBP26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms