RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, human

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IPO4-215	ENST00000560935	ZRANB1	Q9UGI0	708 aa		28.01	■■■□□ 2.07
IPO4-215	ENST00000560935	CRB1	P82279	1406 aa		28.01	■■■□□ 2.07
IPO4-215	ENST00000560935	THRAP3	Q9Y2W1	955 aa	Known RBP	28	■■■□□ 2.07
IPO4-215	ENST00000560935	SF3B2	Q13435	895 aa	Known RBP	27.99	■■■□□ 2.07
IPO4-215	ENST00000560935	ANKRD36B	Q8N2N9	1353 aa		27.99	■■■□□ 2.07
IPO4-215	ENST00000560935	ABCC6	O95255	1503 aa		27.98	■■■□□ 2.07
IPO4-215	ENST00000560935	RGPD5	Q99666	1765 aa		27.97	■■■□□ 2.07
IPO4-215	ENST00000560935	AXIN2	Q9Y2T1	843 aa		27.96	■■■□□ 2.07
IPO4-215	ENST00000560935	OVOS2	A0A0J9YW53	1432 aa		27.95	■■■□□ 2.07
IPO4-215	ENST00000560935	OVOS2	Q6IE36	1432 aa		27.95	■■■□□ 2.07
IPO4-215	ENST00000560935	TOM1L2	Q6ZVM7	507 aa		27.95	■■■□□ 2.06
IPO4-215	ENST00000560935	WDR17	Q8IZU2	1322 aa		27.94	■■■□□ 2.06
IPO4-215	ENST00000560935	LTN1	O94822	1766 aa		27.94	■■■□□ 2.06
IPO4-215	ENST00000560935	PARP4	Q9UKK3	1724 aa	Known RBP	27.92	■■■□□ 2.06
IPO4-215	ENST00000560935	PDE3B	Q13370	1112 aa		27.92	■■■□□ 2.06
IPO4-215	ENST00000560935	FAM182B	Q5T319	152 aa		27.92	■■■□□ 2.06
IPO4-215	ENST00000560935	CSB-PGBD3	P0DP91	1061 aa		27.91	■■■□□ 2.06
IPO4-215	ENST00000560935	RGPD1	P0DJD0	1748 aa		27.91	■■■□□ 2.06
IPO4-215	ENST00000560935	COG3	Q96JB2	828 aa		27.89	■■■□□ 2.06
IPO4-215	ENST00000560935	MYOM1	P52179	1685 aa		27.88	■■■□□ 2.05
IPO4-215	ENST00000560935	WNK3	Q9BYP7	1800 aa		27.88	■■■□□ 2.05
IPO4-215	ENST00000560935	FAM196A	Q6ZSG2	479 aa		27.88	■■■□□ 2.05
IPO4-215	ENST00000560935	EIF4G2	P78344	907 aa	Known RBP eCLIP	27.87	■■■□□ 2.05
IPO4-215	ENST00000560935	DEFB132	Q7Z7B7	95 aa		27.87	■■■□□ 2.05
IPO4-215	ENST00000560935	BAG6	P46379	1132 aa		27.85	■■■□□ 2.05
IPO4-215	ENST00000560935	CARD10	Q9BWT7	1032 aa		27.85	■■■□□ 2.05
IPO4-215	ENST00000560935	LRRC37A3	O60309	1634 aa		27.84	■■■□□ 2.05
IPO4-215	ENST00000560935	CDCA7	Q9BWT1	371 aa	Predicted RBP	27.83	■■■□□ 2.05
IPO4-215	ENST00000560935	TNS1	Q9HBL0	1735 aa	Known RBP	27.83	■■■□□ 2.05
IPO4-215	ENST00000560935	KIF20B	Q96Q89	1820 aa		27.83	■■■□□ 2.05
IPO4-215	ENST00000560935	ERBB3	P21860	1342 aa		27.82	■■■□□ 2.04
IPO4-215	ENST00000560935	CCDC7	Q96M83	1385 aa		27.82	■■■□□ 2.04
IPO4-215	ENST00000560935	HSPA5	P11021	654 aa	Known RBP	27.81	■■■□□ 2.04
IPO4-215	ENST00000560935	DDB1	Q16531	1140 aa		27.81	■■■□□ 2.04
IPO4-215	ENST00000560935	FYB1	O15117	783 aa		27.79	■■■□□ 2.04
IPO4-215	ENST00000560935	C11orf95	C9JLR9	678 aa	Predicted RBP	27.78	■■■□□ 2.04
IPO4-215	ENST00000560935	TRIM37	O94972	964 aa		27.78	■■■□□ 2.04
IPO4-215	ENST00000560935	ANKRD24	Q8TF21	1146 aa		27.78	■■■□□ 2.04
IPO4-215	ENST00000560935	POLR3GL	Q9BT43	218 aa		27.78	■■■□□ 2.04
IPO4-215	ENST00000560935	GGNBP2	Q9H3C7	697 aa		27.78	■■■□□ 2.04
IPO4-215	ENST00000560935	OVOS2	A0A0G2JMS6	1433 aa		27.77	■■■□□ 2.04
IPO4-215	ENST00000560935	DISP2	A7MBM2	1401 aa		27.77	■■■□□ 2.04
IPO4-215	ENST00000560935	IP6K1	Q92551	441 aa		27.77	■■■□□ 2.04
IPO4-215	ENST00000560935	NLRP2	Q9NX02	1062 aa		27.77	■■■□□ 2.04
IPO4-215	ENST00000560935	NSD3	Q9BZ95	1437 aa		27.76	■■■□□ 2.04
IPO4-215	ENST00000560935	MAP3K19	Q56UN5	1328 aa		27.75	■■■□□ 2.03
IPO4-215	ENST00000560935	FAM208A	Q9UK61	1670 aa	Known RBP	27.75	■■■□□ 2.03
IPO4-215	ENST00000560935	AMPH	P49418	695 aa		27.74	■■■□□ 2.03
IPO4-215	ENST00000560935	EN1	Q05925	392 aa	Predicted RBP	27.74	■■■□□ 2.03
IPO4-215	ENST00000560935	PEAK1	Q9H792	1746 aa		27.74	■■■□□ 2.03
IPO4-215	ENST00000560935	CARD14	Q9BXL6	1004 aa		27.73	■■■□□ 2.03
IPO4-215	ENST00000560935	RTL1	A6NKG5	1358 aa		27.72	■■■□□ 2.03
IPO4-215	ENST00000560935	FBLN1	P23142	703 aa		27.71	■■■□□ 2.03
IPO4-215	ENST00000560935	HOXC9	P31274	260 aa		27.71	■■■□□ 2.03
IPO4-215	ENST00000560935	EXOC5	O00471	708 aa		27.7	■■■□□ 2.02
IPO4-215	ENST00000560935	APBA3	O96018	575 aa		27.7	■■■□□ 2.02
IPO4-215	ENST00000560935	LTV1	Q96GA3	475 aa	Predicted RBP	27.69	■■■□□ 2.02
IPO4-215	ENST00000560935	TNS2	Q63HR2	1409 aa		27.68	■■■□□ 2.02
IPO4-215	ENST00000560935	RRS1	Q15050	365 aa	Known RBP	27.68	■■■□□ 2.02
IPO4-215	ENST00000560935	SBF2	Q86WG5	1849 aa		27.67	■■■□□ 2.02
IPO4-215	ENST00000560935	IL2RB	P14784	551 aa		27.67	■■■□□ 2.02
IPO4-215	ENST00000560935	MARCH10	Q8NA82	808 aa	Predicted RBP	27.67	■■■□□ 2.02
IPO4-215	ENST00000560935	CGNL1	Q0VF96	1302 aa		27.67	■■■□□ 2.02
IPO4-215	ENST00000560935	PARD3	Q8TEW0	1356 aa		27.66	■■■□□ 2.02
IPO4-215	ENST00000560935	EZH2	Q15910	746 aa	Known RBP	27.65	■■■□□ 2.02
IPO4-215	ENST00000560935	CAMKK2	Q96RR4	588 aa		27.64	■■■□□ 2.02
IPO4-215	ENST00000560935	BCL9	O00512	1426 aa		27.64	■■■□□ 2.02
IPO4-215	ENST00000560935	KIF24	Q5T7B8	1368 aa		27.62	■■■□□ 2.01
IPO4-215	ENST00000560935	SMG6	Q86US8	1419 aa	Known RBP	27.62	■■■□□ 2.01
IPO4-215	ENST00000560935	FLT4	P35916	1363 aa		27.6	■■■□□ 2.01
IPO4-215	ENST00000560935	RGPD2	P0DJD1	1756 aa		27.6	■■■□□ 2.01
IPO4-215	ENST00000560935	RREB1	Q92766	1687 aa		27.6	■■■□□ 2.01
IPO4-215	ENST00000560935	ANKRD26	Q9UPS8	1709 aa		27.59	■■■□□ 2.01
IPO4-215	ENST00000560935	BCL11B	Q9C0K0	894 aa	Predicted RBP	27.58	■■■□□ 2.01
IPO4-215	ENST00000560935	INSR	P06213	1382 aa		27.58	■■■□□ 2.01
IPO4-215	ENST00000560935	PANK3	Q9H999	370 aa		27.57	■■■□□ 2
IPO4-215	ENST00000560935	RGPD3	A6NKT7	1758 aa	Predicted RBP	27.57	■■■□□ 2
IPO4-215	ENST00000560935	RGPD4	Q7Z3J3	1758 aa		27.57	■■■□□ 2
IPO4-215	ENST00000560935	HSP90AB2P	Q58FF8	381 aa		27.55	■■■□□ 2
IPO4-215	ENST00000560935	NUP188	Q5SRE5	1749 aa		27.55	■■■□□ 2
IPO4-215	ENST00000560935	PSD	A5PKW4	1024 aa	Predicted RBP	27.54	■■■□□ 2
IPO4-215	ENST00000560935	EMILIN1	Q9Y6C2	1016 aa		27.54	■■■□□ 2
IPO4-215	ENST00000560935	MAP2	P11137	1827 aa	Known RBP	27.53	■■■□□ 2
IPO4-215	ENST00000560935	NHS	Q6T4R5	1651 aa		27.52	■■■□□ 2
IPO4-215	ENST00000560935	PLSCR1	O15162	318 aa		27.52	■■■□□ 2
IPO4-215	ENST00000560935	NBPF6	Q5VWK0	638 aa		27.52	■■■□□ 2
IPO4-215	ENST00000560935	NBPF4	Q96M43	638 aa		27.52	■■■□□ 2
IPO4-215	ENST00000560935	NSD2	O96028	1365 aa		27.51	■■□□□ 1.99
IPO4-215	ENST00000560935	PTF1A	Q7RTS3	328 aa		27.51	■■□□□ 1.99
IPO4-215	ENST00000560935	PPM1G	O15355	546 aa	Predicted RBP	27.5	■■□□□ 1.99
IPO4-215	ENST00000560935	R3HDM1	Q15032	1099 aa	Known RBP	27.5	■■□□□ 1.99
IPO4-215	ENST00000560935	KIF7	Q2M1P5	1343 aa		27.49	■■□□□ 1.99
IPO4-215	ENST00000560935	MEGF6	O75095	1541 aa		27.49	■■□□□ 1.99
IPO4-215	ENST00000560935	NBPF14	Q5TI25	921 aa		27.48	■■□□□ 1.99
IPO4-215	ENST00000560935	USHBP1	Q8N6Y0	703 aa		27.48	■■□□□ 1.99
IPO4-215	ENST00000560935	DDX54	Q8TDD1	881 aa	Known RBP	27.48	■■□□□ 1.99
IPO4-215	ENST00000560935	RAPGEF4	Q8WZA2	1011 aa		27.47	■■□□□ 1.99
IPO4-215	ENST00000560935	ACSBG1	Q96GR2	724 aa		27.47	■■□□□ 1.99
IPO4-215	ENST00000560935	WASHC2A	Q641Q2	1341 aa		27.46	■■□□□ 1.99
IPO4-215	ENST00000560935	ZCRB1	Q8TBF4	217 aa	Known RBP	27.46	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms