RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 RRS1Q15050 365 aaKnown RBP22.87■■□□□ 1.25
RPL28-211ENST00000560881 MAP3K19Q56UN5 1328 aa22.86■■□□□ 1.25
RPL28-211ENST00000560881 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
RPL28-211ENST00000560881 CCDC9Q9Y3X0 531 aaKnown RBP22.86■■□□□ 1.25
RPL28-211ENST00000560881 PEAK1Q9H792 1746 aa22.85■■□□□ 1.25
RPL28-211ENST00000560881 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
RPL28-211ENST00000560881 CNGB1Q14028 1251 aaPredicted RBP22.85■■□□□ 1.25
RPL28-211ENST00000560881 MAP2P11137 1827 aaKnown RBP22.85■■□□□ 1.25
RPL28-211ENST00000560881 RXRBP28702 533 aa22.84■■□□□ 1.25
RPL28-211ENST00000560881 VPS72Q15906 364 aa22.84■■□□□ 1.25
RPL28-211ENST00000560881 GJD4Q96KN9 370 aaPredicted RBP22.84■■□□□ 1.25
RPL28-211ENST00000560881 LARP1Q6PKG0 1096 aaKnown RBP22.83■■□□□ 1.24
RPL28-211ENST00000560881 ABCC6O95255 1503 aa22.83■■□□□ 1.24
RPL28-211ENST00000560881 NSD2O96028 1365 aa22.83■■□□□ 1.24
RPL28-211ENST00000560881 EVA1CP58658 441 aa22.82■■□□□ 1.24
RPL28-211ENST00000560881 RBM6P78332 1123 aaKnown RBP22.82■■□□□ 1.24
RPL28-211ENST00000560881 CC2D1BQ5T0F9 858 aaKnown RBP22.81■■□□□ 1.24
RPL28-211ENST00000560881 RGS12O14924 1447 aa22.81■■□□□ 1.24
RPL28-211ENST00000560881 USP35Q9P2H5 1018 aa22.8■■□□□ 1.24
RPL28-211ENST00000560881 EMILIN1Q9Y6C2 1016 aa22.8■■□□□ 1.24
RPL28-211ENST00000560881 SPATA31A5Q5VU36 1347 aa22.79■■□□□ 1.24
RPL28-211ENST00000560881 SPATA31A7Q8IWB4 1347 aa22.79■■□□□ 1.24
RPL28-211ENST00000560881 HOXC9P31274 260 aa22.78■■□□□ 1.24
RPL28-211ENST00000560881 AMPHP49418 695 aa22.78■■□□□ 1.24
RPL28-211ENST00000560881 DDX10Q13206 875 aaKnown RBP22.78■■□□□ 1.24
RPL28-211ENST00000560881 MORC1Q86VD1 984 aa22.78■■□□□ 1.24
RPL28-211ENST00000560881 IP6K1Q92551 441 aa22.77■■□□□ 1.24
RPL28-211ENST00000560881 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
RPL28-211ENST00000560881 SPATA31A1Q5TZJ5 1347 aa22.77■■□□□ 1.23
RPL28-211ENST00000560881 BLMP54132 1417 aaPredicted RBP22.76■■□□□ 1.23
RPL28-211ENST00000560881 PPM1GO15355 546 aaPredicted RBP22.76■■□□□ 1.23
RPL28-211ENST00000560881 LTV1Q96GA3 475 aaPredicted RBP22.76■■□□□ 1.23
RPL28-211ENST00000560881 ERBB3P21860 1342 aa22.76■■□□□ 1.23
RPL28-211ENST00000560881 WDR17Q8IZU2 1322 aa22.76■■□□□ 1.23
RPL28-211ENST00000560881 CRB1P82279 1406 aa22.75■■□□□ 1.23
RPL28-211ENST00000560881 CSB-PGBD3P0DP91 1061 aa22.75■■□□□ 1.23
RPL28-211ENST00000560881 FAM98CQ17RN3 349 aaKnown RBP22.75■■□□□ 1.23
RPL28-211ENST00000560881 ANKRD24Q8TF21 1146 aa22.75■■□□□ 1.23
RPL28-211ENST00000560881 RTL1A6NKG5 1358 aa22.75■■□□□ 1.23
RPL28-211ENST00000560881 CDK12Q9NYV4 1490 aaPredicted RBP22.75■■□□□ 1.23
RPL28-211ENST00000560881 BRWD3Q6RI45 1802 aa22.74■■□□□ 1.23
RPL28-211ENST00000560881 TOM1L2Q6ZVM7 507 aa22.74■■□□□ 1.23
RPL28-211ENST00000560881 POLKQ9UBT6 870 aa22.74■■□□□ 1.23
RPL28-211ENST00000560881 FLT4P35916 1363 aa22.73■■□□□ 1.23
RPL28-211ENST00000560881 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
RPL28-211ENST00000560881 NPC1L1Q9UHC9 1359 aa22.73■■□□□ 1.23
RPL28-211ENST00000560881 WNK3Q9BYP7 1800 aa22.72■■□□□ 1.23
RPL28-211ENST00000560881 ZNF316A6NFI3 1004 aaPredicted RBP22.72■■□□□ 1.23
RPL28-211ENST00000560881 THSD7AQ9UPZ6 1657 aa22.71■■□□□ 1.23
RPL28-211ENST00000560881 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
RPL28-211ENST00000560881 EP400Q96L91 3159 aa22.7■■□□□ 1.22
RPL28-211ENST00000560881 A0A0G2JS52 829 aa22.7■■□□□ 1.22
RPL28-211ENST00000560881 MYT1Q01538 1121 aa22.7■■□□□ 1.22
RPL28-211ENST00000560881 SMG6Q86US8 1419 aaKnown RBP22.69■■□□□ 1.22
RPL28-211ENST00000560881 INSRP06213 1382 aa22.69■■□□□ 1.22
RPL28-211ENST00000560881 KIF24Q5T7B8 1368 aa22.69■■□□□ 1.22
RPL28-211ENST00000560881 SEPT12Q8IYM1 358 aa22.68■■□□□ 1.22
RPL28-211ENST00000560881 TCP11L2Q8N4U5 519 aa22.68■■□□□ 1.22
RPL28-211ENST00000560881 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
RPL28-211ENST00000560881 CARD10Q9BWT7 1032 aa22.67■■□□□ 1.22
RPL28-211ENST00000560881 ONECUT3O60422 494 aaPredicted RBP22.66■■□□□ 1.22
RPL28-211ENST00000560881 BARGINQ6ZT62 677 aa22.65■■□□□ 1.22
RPL28-211ENST00000560881 LRRC37A3O60309 1634 aa22.64■■□□□ 1.22
RPL28-211ENST00000560881 PARP4Q9UKK3 1724 aaKnown RBP22.64■■□□□ 1.21
RPL28-211ENST00000560881 THRAP3Q9Y2W1 955 aaKnown RBP22.64■■□□□ 1.21
RPL28-211ENST00000560881 USHBP1Q8N6Y0 703 aa22.63■■□□□ 1.21
RPL28-211ENST00000560881 MTHFSP49914 203 aa22.62■■□□□ 1.21
RPL28-211ENST00000560881 DISP2A7MBM2 1401 aa22.62■■□□□ 1.21
RPL28-211ENST00000560881 NBPF6Q5VWK0 638 aa22.62■■□□□ 1.21
RPL28-211ENST00000560881 NBPF4Q96M43 638 aa22.62■■□□□ 1.21
RPL28-211ENST00000560881 EIF4A2Q14240 407 aaKnown RBP22.6■■□□□ 1.21
RPL28-211ENST00000560881 FAM182BQ5T319 152 aa22.58■■□□□ 1.21
RPL28-211ENST00000560881 PARD3Q8TEW0 1356 aa22.58■■□□□ 1.21
RPL28-211ENST00000560881 KRT27Q7Z3Y8 459 aa22.57■■□□□ 1.2
RPL28-211ENST00000560881 PPP2R1AP30153 589 aa22.56■■□□□ 1.2
RPL28-211ENST00000560881 MEGF6O75095 1541 aa22.56■■□□□ 1.2
RPL28-211ENST00000560881 EYA1Q99502 592 aa22.55■■□□□ 1.2
RPL28-211ENST00000560881 RGPD1P0DJD0 1748 aa22.54■■□□□ 1.2
RPL28-211ENST00000560881 COL3A1P02461 1466 aaPredicted RBP22.54■■□□□ 1.2
RPL28-211ENST00000560881 IL2RBP14784 551 aa22.54■■□□□ 1.2
RPL28-211ENST00000560881 DDB1Q16531 1140 aa22.53■■□□□ 1.2
RPL28-211ENST00000560881 NCAPD2Q15021 1401 aa22.53■■□□□ 1.2
RPL28-211ENST00000560881 SHANK3Q9BYB0 1731 aa22.53■■□□□ 1.2
RPL28-211ENST00000560881 TNS2Q63HR2 1409 aa22.52■■□□□ 1.2
RPL28-211ENST00000560881 IL13P35225 146 aa22.52■■□□□ 1.2
RPL28-211ENST00000560881 PDE3BQ13370 1112 aa22.51■■□□□ 1.19
RPL28-211ENST00000560881 CDCA7Q9BWT1 371 aaPredicted RBP22.51■■□□□ 1.19
RPL28-211ENST00000560881 IGSF1Q8N6C5 1336 aa22.5■■□□□ 1.19
RPL28-211ENST00000560881 SOCS7O14512 581 aa22.5■■□□□ 1.19
RPL28-211ENST00000560881 OVOS2A0A0G2JMS6 1433 aa22.49■■□□□ 1.19
RPL28-211ENST00000560881 AEBP1Q8IUX7 1158 aa22.48■■□□□ 1.19
RPL28-211ENST00000560881 EXOC5O00471 708 aa22.47■■□□□ 1.19
RPL28-211ENST00000560881 MARCH10Q8NA82 808 aaPredicted RBP22.47■■□□□ 1.19
RPL28-211ENST00000560881 RAPGEF4Q8WZA2 1011 aa22.47■■□□□ 1.19
RPL28-211ENST00000560881 DIAPH1O60610 1272 aaKnown RBP22.46■■□□□ 1.19
RPL28-211ENST00000560881 RALBP1Q15311 655 aa22.46■■□□□ 1.19
RPL28-211ENST00000560881 PKD1L3Q7Z443 1732 aa22.45■■□□□ 1.19
RPL28-211ENST00000560881 TATP17735 454 aaPredicted RBP22.45■■□□□ 1.18
RPL28-211ENST00000560881 UPF1Q92900 1129 aaKnown RBP eCLIP22.45■■□□□ 1.18
RPL28-211ENST00000560881 PRKRIP1Q9H875 184 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms