RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ZNF385CQ66K41 422 aaPredicted RBP10.2□□□□□ -0.78
PSMA4-221ENST00000560842 FIGNL2A6NMB9 653 aa10.19□□□□□ -0.78
PSMA4-221ENST00000560842 TUSC1Q2TAM9 212 aa10.19□□□□□ -0.78
PSMA4-221ENST00000560842 Q6ZVU0 165 aa10.19□□□□□ -0.78
PSMA4-221ENST00000560842 CCDC155Q8N6L0 562 aa10.19□□□□□ -0.78
PSMA4-221ENST00000560842 TSC1Q92574 1164 aa10.19□□□□□ -0.78
PSMA4-221ENST00000560842 LILRB3O75022 631 aa10.18□□□□□ -0.78
PSMA4-221ENST00000560842 RNFT1Q5M7Z0 435 aa10.18□□□□□ -0.78
PSMA4-221ENST00000560842 MAGEB6P1A0A0J9YX57 407 aa10.17□□□□□ -0.78
PSMA4-221ENST00000560842 SLC35F4A4IF30 521 aa10.17□□□□□ -0.78
PSMA4-221ENST00000560842 NUTM2BA6NNL0 878 aaPredicted RBP10.17□□□□□ -0.78
PSMA4-221ENST00000560842 NUTM2EB1AL46 878 aaPredicted RBP10.17□□□□□ -0.78
PSMA4-221ENST00000560842 SPINT1O43278 529 aa10.17□□□□□ -0.78
PSMA4-221ENST00000560842 SLURP2P0DP57 97 aa10.17□□□□□ -0.78
PSMA4-221ENST00000560842 QPCTQ16769 361 aa10.17□□□□□ -0.78
PSMA4-221ENST00000560842 PPP1R26Q5T8A7 1209 aaPredicted RBP10.17□□□□□ -0.78
PSMA4-221ENST00000560842 NUTM2DQ5VT03 806 aaPredicted RBP10.17□□□□□ -0.78
PSMA4-221ENST00000560842 NUTM2AQ8IVF1 878 aaPredicted RBP10.17□□□□□ -0.78
PSMA4-221ENST00000560842 SVOPQ8N4V2 548 aa10.17□□□□□ -0.78
PSMA4-221ENST00000560842 LIMD1Q9UGP4 676 aa10.17□□□□□ -0.78
PSMA4-221ENST00000560842 ARHGEF15O94989 841 aa10.16□□□□□ -0.78
PSMA4-221ENST00000560842 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.78
PSMA4-221ENST00000560842 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
PSMA4-221ENST00000560842 CBLBQ13191 982 aa10.15□□□□□ -0.78
PSMA4-221ENST00000560842 BRPF1P55201 1214 aaPredicted RBP10.14□□□□□ -0.79
PSMA4-221ENST00000560842 ERFEQ4G0M1 354 aa10.14□□□□□ -0.79
PSMA4-221ENST00000560842 MYSM1Q5VVJ2 828 aa10.14□□□□□ -0.79
PSMA4-221ENST00000560842 WHAMMQ8TF30 809 aa10.14□□□□□ -0.79
PSMA4-221ENST00000560842 ITGA6P23229 1130 aa10.13□□□□□ -0.79
PSMA4-221ENST00000560842 VWA5B2Q8N398 1253 aa10.13□□□□□ -0.79
PSMA4-221ENST00000560842 HELBQ8NG08 1087 aaPredicted RBP10.13□□□□□ -0.79
PSMA4-221ENST00000560842 CARD14Q9BXL6 1004 aa10.13□□□□□ -0.79
PSMA4-221ENST00000560842 DNMT3AQ9Y6K1 912 aaPredicted RBP10.13□□□□□ -0.79
PSMA4-221ENST00000560842 IGHA1P01876 353 aa10.12□□□□□ -0.79
PSMA4-221ENST00000560842 SV2AQ7L0J3 742 aa10.12□□□□□ -0.79
PSMA4-221ENST00000560842 IRS1P35568 1242 aa10.11□□□□□ -0.79
PSMA4-221ENST00000560842 RTL5Q5HYW3 569 aaPredicted RBP10.11□□□□□ -0.79
PSMA4-221ENST00000560842 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
PSMA4-221ENST00000560842 KDM4CQ9H3R0 1056 aa10.1□□□□□ -0.79
PSMA4-221ENST00000560842 DHX9Q08211 1270 aaKnown RBP10.09□□□□□ -0.79
PSMA4-221ENST00000560842 GPAT2Q6NUI2 795 aa10.09□□□□□ -0.79
PSMA4-221ENST00000560842 KCTD15Q96SI1 283 aaPredicted RBP10.09□□□□□ -0.79
PSMA4-221ENST00000560842 GPBP1L1Q9HC44 474 aaPredicted RBP10.09□□□□□ -0.79
PSMA4-221ENST00000560842 CDV3Q9UKY7 258 aaKnown RBP10.09□□□□□ -0.79
PSMA4-221ENST00000560842 CDC14CA4D256 554 aa10.08□□□□□ -0.8
PSMA4-221ENST00000560842 CTSOP43234 321 aaPredicted RBP10.08□□□□□ -0.8
PSMA4-221ENST00000560842 MARSP56192 900 aaKnown RBP10.08□□□□□ -0.8
PSMA4-221ENST00000560842 PDXDC2PQ6P474 469 aa10.08□□□□□ -0.8
PSMA4-221ENST00000560842 FOXK2Q01167 660 aa10.07□□□□□ -0.8
PSMA4-221ENST00000560842 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
PSMA4-221ENST00000560842 SCARF2Q96GP6 870 aaPredicted RBP10.07□□□□□ -0.8
PSMA4-221ENST00000560842 AGBL1Q96MI9 1066 aa10.06□□□□□ -0.8
PSMA4-221ENST00000560842 ARHGAP9Q9BRR9 750 aa10.06□□□□□ -0.8
PSMA4-221ENST00000560842 INSM2Q96T92 566 aaPredicted RBP10.05□□□□□ -0.8
PSMA4-221ENST00000560842 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
PSMA4-221ENST00000560842 ADAMTS2O95450 1211 aa10.04□□□□□ -0.8
PSMA4-221ENST00000560842 RELBQ01201 579 aa10.04□□□□□ -0.8
PSMA4-221ENST00000560842 SLC10A4Q96EP9 437 aa10.04□□□□□ -0.8
PSMA4-221ENST00000560842 CTDSPL2Q05D32 466 aa10.03□□□□□ -0.8
PSMA4-221ENST00000560842 LYPD4Q6UWN0 246 aa10.03□□□□□ -0.8
PSMA4-221ENST00000560842 RNF217Q8TC41 542 aa10.03□□□□□ -0.8
PSMA4-221ENST00000560842 FKBPLQ9UIM3 349 aa10.03□□□□□ -0.8
PSMA4-221ENST00000560842 CLK2P49760 499 aaKnown RBP10.02□□□□□ -0.81
PSMA4-221ENST00000560842 SRSF11Q05519 484 aaKnown RBP10.02□□□□□ -0.81
PSMA4-221ENST00000560842 INTS6LQ5JSJ4 861 aaKnown RBP10.02□□□□□ -0.81
PSMA4-221ENST00000560842 ZBTB33Q86T24 672 aa10.02□□□□□ -0.81
PSMA4-221ENST00000560842 POLMQ9NP87 494 aaPredicted RBP10.02□□□□□ -0.81
PSMA4-221ENST00000560842 FAM117AQ9C073 453 aa10.01□□□□□ -0.81
PSMA4-221ENST00000560842 ZNF395Q9H8N7 513 aaPredicted RBP10.01□□□□□ -0.81
PSMA4-221ENST00000560842 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
PSMA4-221ENST00000560842 ZC3H4Q9UPT8 1303 aaKnown RBP9.99□□□□□ -0.81
PSMA4-221ENST00000560842 CELA2BP08218 269 aaPredicted RBP9.98□□□□□ -0.81
PSMA4-221ENST00000560842 MAP3K10Q02779 954 aa9.98□□□□□ -0.81
PSMA4-221ENST00000560842 OCSTAMPQ9BR26 566 aa9.98□□□□□ -0.81
PSMA4-221ENST00000560842 RSPH6AQ9H0K4 717 aa9.98□□□□□ -0.81
PSMA4-221ENST00000560842 PTK2Q05397 1052 aa9.97□□□□□ -0.81
PSMA4-221ENST00000560842 GAS6Q14393 721 aa9.97□□□□□ -0.81
PSMA4-221ENST00000560842 FOXD4L5Q5VV16 416 aaPredicted RBP9.97□□□□□ -0.81
PSMA4-221ENST00000560842 LRRN4Q8WUT4 740 aa9.97□□□□□ -0.81
PSMA4-221ENST00000560842 ENAMQ9NRM1 1142 aa9.96□□□□□ -0.82
PSMA4-221ENST00000560842 TMPRSS4Q9NRS4 437 aa9.96□□□□□ -0.82
PSMA4-221ENST00000560842 POLR3EQ9NVU0 708 aa9.96□□□□□ -0.82
PSMA4-221ENST00000560842 CUEDC1Q9NWM3 386 aaPredicted RBP9.96□□□□□ -0.82
PSMA4-221ENST00000560842 GPSM3Q9Y4H4 160 aa9.96□□□□□ -0.82
PSMA4-221ENST00000560842 ADH1AP07327 375 aa9.95□□□□□ -0.82
PSMA4-221ENST00000560842 KDF1Q8NAX2 398 aaPredicted RBP9.95□□□□□ -0.82
PSMA4-221ENST00000560842 ADD1P35611 737 aaKnown RBP9.94□□□□□ -0.82
PSMA4-221ENST00000560842 PTGIRP43119 386 aa9.94□□□□□ -0.82
PSMA4-221ENST00000560842 NR6A1Q15406 480 aa9.94□□□□□ -0.82
PSMA4-221ENST00000560842 LYSMD3Q7Z3D4 306 aa9.94□□□□□ -0.82
PSMA4-221ENST00000560842 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
PSMA4-221ENST00000560842 ADAM32Q8TC27 787 aa9.94□□□□□ -0.82
PSMA4-221ENST00000560842 GOPCQ9HD26 462 aa9.94□□□□□ -0.82
PSMA4-221ENST00000560842 LILRA1O75019 489 aa9.93□□□□□ -0.82
PSMA4-221ENST00000560842 NBPF20Q3BBV1 942 aa9.93□□□□□ -0.82
PSMA4-221ENST00000560842 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
PSMA4-221ENST00000560842 PHF20L1A8MW92 1017 aa9.91□□□□□ -0.82
PSMA4-221ENST00000560842 MSTNO14793 375 aa9.91□□□□□ -0.82
PSMA4-221ENST00000560842 PLA2G4EQ3MJ16 856 aa9.91□□□□□ -0.82
PSMA4-221ENST00000560842 SH3D19Q5HYK7 790 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms