RNA–Protein interactions for RNA: ENST00000560309.5

ETFA-213, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-213ENST00000560309 SLC12A5Q9H2X9 1139 aa29.08■■■□□ 2.25
ETFA-213ENST00000560309 AXIN2Q9Y2T1 843 aa29.08■■■□□ 2.25
ETFA-213ENST00000560309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.07■■■□□ 2.24
ETFA-213ENST00000560309 PARP4Q9UKK3 1724 aaKnown RBP29.07■■■□□ 2.24
ETFA-213ENST00000560309 ST20-MTHFSA0A0A6YYL1 179 aa29.06■■■□□ 2.24
ETFA-213ENST00000560309 TIMELESSQ9UNS1 1208 aa29.06■■■□□ 2.24
ETFA-213ENST00000560309 ABCC6O95255 1503 aa29.05■■■□□ 2.24
ETFA-213ENST00000560309 APBA3O96018 575 aa29.05■■■□□ 2.24
ETFA-213ENST00000560309 DDB1Q16531 1140 aa29.05■■■□□ 2.24
ETFA-213ENST00000560309 CARD10Q9BWT7 1032 aa29.05■■■□□ 2.24
ETFA-213ENST00000560309 CD163L1Q9NR16 1453 aa29.04■■■□□ 2.24
ETFA-213ENST00000560309 EDC4Q6P2E9 1401 aaKnown RBP29.04■■■□□ 2.24
ETFA-213ENST00000560309 CSB-PGBD3P0DP91 1061 aa29.04■■■□□ 2.24
ETFA-213ENST00000560309 CAMKK2Q96RR4 588 aa29.04■■■□□ 2.24
ETFA-213ENST00000560309 TESK2Q96S53 571 aa29.04■■■□□ 2.24
ETFA-213ENST00000560309 TNS1Q9HBL0 1735 aaKnown RBP29.03■■■□□ 2.24
ETFA-213ENST00000560309 SOX12O15370 315 aa29.03■■■□□ 2.24
ETFA-213ENST00000560309 NFAT5O94916 1531 aa29.01■■■□□ 2.23
ETFA-213ENST00000560309 EZH2Q15910 746 aaKnown RBP29.01■■■□□ 2.23
ETFA-213ENST00000560309 USP54Q70EL1 1684 aa29.01■■■□□ 2.23
ETFA-213ENST00000560309 NME9Q86XW9 330 aa29■■■□□ 2.23
ETFA-213ENST00000560309 CLSPNQ9HAW4 1339 aa28.99■■■□□ 2.23
ETFA-213ENST00000560309 OVOS2A0A0G2JMS6 1433 aa28.99■■■□□ 2.23
ETFA-213ENST00000560309 OVOS2A0A0J9YW53 1432 aa28.99■■■□□ 2.23
ETFA-213ENST00000560309 OVOS2Q6IE36 1432 aa28.99■■■□□ 2.23
ETFA-213ENST00000560309 CCDC7Q96M83 1385 aa28.99■■■□□ 2.23
ETFA-213ENST00000560309 A0A1W2PP64 1363 aa28.98■■■□□ 2.23
ETFA-213ENST00000560309 TMF1P82094 1093 aa28.96■■■□□ 2.23
ETFA-213ENST00000560309 CDCA8Q53HL2 280 aa28.95■■■□□ 2.22
ETFA-213ENST00000560309 RGPD5Q99666 1765 aa28.95■■■□□ 2.22
ETFA-213ENST00000560309 PSDA5PKW4 1024 aaPredicted RBP28.94■■■□□ 2.22
ETFA-213ENST00000560309 EXOC5O00471 708 aa28.94■■■□□ 2.22
ETFA-213ENST00000560309 NBPF14Q5TI25 921 aa28.94■■■□□ 2.22
ETFA-213ENST00000560309 BCL9O00512 1426 aa28.93■■■□□ 2.22
ETFA-213ENST00000560309 ERBB3P21860 1342 aa28.91■■■□□ 2.22
ETFA-213ENST00000560309 LRRC37A3O60309 1634 aa28.91■■■□□ 2.22
ETFA-213ENST00000560309 USP47Q96K76 1375 aa28.9■■■□□ 2.22
ETFA-213ENST00000560309 PLSCR1O15162 318 aa28.9■■■□□ 2.22
ETFA-213ENST00000560309 R3HDM1Q15032 1099 aaKnown RBP28.9■■■□□ 2.22
ETFA-213ENST00000560309 BCL11BQ9C0K0 894 aaPredicted RBP28.9■■■□□ 2.22
ETFA-213ENST00000560309 LRP5O75197 1615 aa28.9■■■□□ 2.22
ETFA-213ENST00000560309 COG3Q96JB2 828 aa28.89■■■□□ 2.22
ETFA-213ENST00000560309 WNK3Q9BYP7 1800 aa28.89■■■□□ 2.22
ETFA-213ENST00000560309 SRCAPQ6ZRS2 3230 aa28.89■■■□□ 2.22
ETFA-213ENST00000560309 PEAK1Q9H792 1746 aa28.89■■■□□ 2.21
ETFA-213ENST00000560309 MARCH10Q8NA82 808 aaPredicted RBP28.88■■■□□ 2.21
ETFA-213ENST00000560309 ANKRD36BQ8N2N9 1353 aa28.88■■■□□ 2.21
ETFA-213ENST00000560309 NLRP2Q9NX02 1062 aa28.87■■■□□ 2.21
ETFA-213ENST00000560309 LTN1O94822 1766 aa28.86■■■□□ 2.21
ETFA-213ENST00000560309 IP6K1Q92551 441 aa28.86■■■□□ 2.21
ETFA-213ENST00000560309 ANKRD24Q8TF21 1146 aa28.85■■■□□ 2.21
ETFA-213ENST00000560309 SBF2Q86WG5 1849 aa28.84■■■□□ 2.21
ETFA-213ENST00000560309 RREB1Q92766 1687 aa28.83■■■□□ 2.21
ETFA-213ENST00000560309 IL2RBP14784 551 aa28.83■■■□□ 2.21
ETFA-213ENST00000560309 PCGF6Q9BYE7 350 aa28.81■■■□□ 2.2
ETFA-213ENST00000560309 RGPD3A6NKT7 1758 aaPredicted RBP28.8■■■□□ 2.2
ETFA-213ENST00000560309 RGPD4Q7Z3J3 1758 aa28.8■■■□□ 2.2
ETFA-213ENST00000560309 TNS2Q63HR2 1409 aa28.78■■■□□ 2.2
ETFA-213ENST00000560309 NUP188Q5SRE5 1749 aa28.77■■■□□ 2.2
ETFA-213ENST00000560309 AMPHP49418 695 aa28.76■■■□□ 2.19
ETFA-213ENST00000560309 FYB1O15117 783 aa28.75■■■□□ 2.19
ETFA-213ENST00000560309 MAP3K19Q56UN5 1328 aa28.73■■■□□ 2.19
ETFA-213ENST00000560309 FAM208AQ9UK61 1670 aaKnown RBP28.73■■■□□ 2.19
ETFA-213ENST00000560309 HOXC9P31274 260 aa28.72■■■□□ 2.19
ETFA-213ENST00000560309 RTL1A6NKG5 1358 aa28.71■■■□□ 2.19
ETFA-213ENST00000560309 PTF1AQ7RTS3 328 aa28.69■■■□□ 2.18
ETFA-213ENST00000560309 LTV1Q96GA3 475 aaPredicted RBP28.69■■■□□ 2.18
ETFA-213ENST00000560309 GGNBP2Q9H3C7 697 aa28.68■■■□□ 2.18
ETFA-213ENST00000560309 PROM2Q8N271 834 aa28.67■■■□□ 2.18
ETFA-213ENST00000560309 KIF24Q5T7B8 1368 aa28.66■■■□□ 2.18
ETFA-213ENST00000560309 TXNRD1Q16881 649 aa28.66■■■□□ 2.18
ETFA-213ENST00000560309 SPON1Q9HCB6 807 aa28.65■■■□□ 2.18
ETFA-213ENST00000560309 KCNQ2O43526 872 aa28.63■■■□□ 2.17
ETFA-213ENST00000560309 FBLN1P23142 703 aa28.63■■■□□ 2.17
ETFA-213ENST00000560309 CGNL1Q0VF96 1302 aa28.63■■■□□ 2.17
ETFA-213ENST00000560309 KAT6BQ8WYB5 2073 aa28.62■■■□□ 2.17
ETFA-213ENST00000560309 NHSQ6T4R5 1651 aa28.62■■■□□ 2.17
ETFA-213ENST00000560309 SMG6Q86US8 1419 aaKnown RBP28.61■■■□□ 2.17
ETFA-213ENST00000560309 RRS1Q15050 365 aaKnown RBP28.61■■■□□ 2.17
ETFA-213ENST00000560309 ACSBG1Q96GR2 724 aa28.61■■■□□ 2.17
ETFA-213ENST00000560309 STK32BQ9NY57 414 aa28.61■■■□□ 2.17
ETFA-213ENST00000560309 DDX54Q8TDD1 881 aaKnown RBP28.6■■■□□ 2.17
ETFA-213ENST00000560309 CCER1Q8TC90 406 aaPredicted RBP28.59■■■□□ 2.17
ETFA-213ENST00000560309 CARD14Q9BXL6 1004 aa28.59■■■□□ 2.17
ETFA-213ENST00000560309 KIF20BQ96Q89 1820 aa28.58■■■□□ 2.17
ETFA-213ENST00000560309 EIF4G2P78344 907 aaKnown RBP eCLIP28.58■■■□□ 2.17
ETFA-213ENST00000560309 ZCRB1Q8TBF4 217 aaKnown RBP28.58■■■□□ 2.17
ETFA-213ENST00000560309 INSRP06213 1382 aa28.58■■■□□ 2.17
ETFA-213ENST00000560309 SLC15A2Q16348 729 aa28.57■■■□□ 2.16
ETFA-213ENST00000560309 FLT4P35916 1363 aa28.57■■■□□ 2.16
ETFA-213ENST00000560309 ANO8Q9HCE9 1232 aaPredicted RBP28.56■■■□□ 2.16
ETFA-213ENST00000560309 NSD3Q9BZ95 1437 aa28.55■■■□□ 2.16
ETFA-213ENST00000560309 NBPF6Q5VWK0 638 aa28.55■■■□□ 2.16
ETFA-213ENST00000560309 NBPF4Q96M43 638 aa28.55■■■□□ 2.16
ETFA-213ENST00000560309 PPP1R1BQ9UD71 204 aaPredicted RBP28.55■■■□□ 2.16
ETFA-213ENST00000560309 RAPGEF4Q8WZA2 1011 aa28.54■■■□□ 2.16
ETFA-213ENST00000560309 MYOM1P52179 1685 aa28.52■■■□□ 2.16
ETFA-213ENST00000560309 HSP90AB2PQ58FF8 381 aa28.52■■■□□ 2.16
ETFA-213ENST00000560309 SLC27A3Q5K4L6 730 aa28.51■■■□□ 2.15
ETFA-213ENST00000560309 TATP17735 454 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms