RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 TERF2IPQ9NYB0 399 aa32.68■■■□□ 2.82
CRNDE-209ENST00000560208 TIMELESSQ9UNS1 1208 aa32.68■■■□□ 2.82
CRNDE-209ENST00000560208 SRCAPQ6ZRS2 3230 aa32.68■■■□□ 2.82
CRNDE-209ENST00000560208 NFAT5O94916 1531 aa32.67■■■□□ 2.82
CRNDE-209ENST00000560208 NME9Q86XW9 330 aa32.66■■■□□ 2.82
CRNDE-209ENST00000560208 USP31Q70CQ4 1352 aa32.66■■■□□ 2.82
CRNDE-209ENST00000560208 TOM1L2Q6ZVM7 507 aa32.65■■■□□ 2.82
CRNDE-209ENST00000560208 A0A1W2PP64 1363 aa32.64■■■□□ 2.82
CRNDE-209ENST00000560208 EDC4Q6P2E9 1401 aaKnown RBP32.64■■■□□ 2.82
CRNDE-209ENST00000560208 USP54Q70EL1 1684 aa32.64■■■□□ 2.82
CRNDE-209ENST00000560208 PARP4Q9UKK3 1724 aaKnown RBP32.63■■■□□ 2.81
CRNDE-209ENST00000560208 WDR17Q8IZU2 1322 aa32.63■■■□□ 2.81
CRNDE-209ENST00000560208 TNS1Q9HBL0 1735 aaKnown RBP32.63■■■□□ 2.81
CRNDE-209ENST00000560208 TRIM37O94972 964 aa32.62■■■□□ 2.81
CRNDE-209ENST00000560208 EN1Q05925 392 aaPredicted RBP32.61■■■□□ 2.81
CRNDE-209ENST00000560208 USP47Q96K76 1375 aa32.6■■■□□ 2.81
CRNDE-209ENST00000560208 NINLQ9Y2I6 1382 aa32.59■■■□□ 2.81
CRNDE-209ENST00000560208 CSB-PGBD3P0DP91 1061 aa32.57■■■□□ 2.8
CRNDE-209ENST00000560208 DISP2A7MBM2 1401 aa32.57■■■□□ 2.8
CRNDE-209ENST00000560208 ABCC6O95255 1503 aa32.56■■■□□ 2.8
CRNDE-209ENST00000560208 LTN1O94822 1766 aa32.55■■■□□ 2.8
CRNDE-209ENST00000560208 WNK3Q9BYP7 1800 aa32.54■■■□□ 2.8
CRNDE-209ENST00000560208 TMF1P82094 1093 aa32.54■■■□□ 2.8
CRNDE-209ENST00000560208 CARD10Q9BWT7 1032 aa32.54■■■□□ 2.8
CRNDE-209ENST00000560208 DDB1Q16531 1140 aa32.53■■■□□ 2.8
CRNDE-209ENST00000560208 LRRC37A3O60309 1634 aa32.51■■■□□ 2.8
CRNDE-209ENST00000560208 APBA3O96018 575 aa32.51■■■□□ 2.79
CRNDE-209ENST00000560208 CDCA7Q9BWT1 371 aaPredicted RBP32.51■■■□□ 2.79
CRNDE-209ENST00000560208 OVOS2A0A0J9YW53 1432 aa32.51■■■□□ 2.79
CRNDE-209ENST00000560208 OVOS2Q6IE36 1432 aa32.51■■■□□ 2.79
CRNDE-209ENST00000560208 EZH2Q15910 746 aaKnown RBP32.5■■■□□ 2.79
CRNDE-209ENST00000560208 C11orf95C9JLR9 678 aaPredicted RBP32.49■■■□□ 2.79
CRNDE-209ENST00000560208 CAMKK2Q96RR4 588 aa32.48■■■□□ 2.79
CRNDE-209ENST00000560208 ANKRD36BQ8N2N9 1353 aa32.46■■■□□ 2.79
CRNDE-209ENST00000560208 PEAK1Q9H792 1746 aa32.46■■■□□ 2.79
CRNDE-209ENST00000560208 OVOS2A0A0G2JMS6 1433 aa32.46■■■□□ 2.79
CRNDE-209ENST00000560208 CCDC7Q96M83 1385 aa32.45■■■□□ 2.79
CRNDE-209ENST00000560208 PSDA5PKW4 1024 aaPredicted RBP32.44■■■□□ 2.78
CRNDE-209ENST00000560208 ERBB3P21860 1342 aa32.44■■■□□ 2.78
CRNDE-209ENST00000560208 SBF2Q86WG5 1849 aa32.44■■■□□ 2.78
CRNDE-209ENST00000560208 CDCA8Q53HL2 280 aa32.43■■■□□ 2.78
CRNDE-209ENST00000560208 COG3Q96JB2 828 aa32.43■■■□□ 2.78
CRNDE-209ENST00000560208 PARD3Q8TEW0 1356 aa32.43■■■□□ 2.78
CRNDE-209ENST00000560208 NLRP2Q9NX02 1062 aa32.41■■■□□ 2.78
CRNDE-209ENST00000560208 MARCH10Q8NA82 808 aaPredicted RBP32.4■■■□□ 2.78
CRNDE-209ENST00000560208 ANKRD24Q8TF21 1146 aa32.4■■■□□ 2.78
CRNDE-209ENST00000560208 EXOC5O00471 708 aa32.39■■■□□ 2.78
CRNDE-209ENST00000560208 IP6K1Q92551 441 aa32.37■■■□□ 2.77
CRNDE-209ENST00000560208 RREB1Q92766 1687 aa32.37■■■□□ 2.77
CRNDE-209ENST00000560208 R3HDM1Q15032 1099 aaKnown RBP32.36■■■□□ 2.77
CRNDE-209ENST00000560208 FYB1O15117 783 aa32.33■■■□□ 2.77
CRNDE-209ENST00000560208 FBLN1P23142 703 aa32.33■■■□□ 2.77
CRNDE-209ENST00000560208 BCL9O00512 1426 aa32.33■■■□□ 2.77
CRNDE-209ENST00000560208 MAP3K19Q56UN5 1328 aa32.32■■■□□ 2.76
CRNDE-209ENST00000560208 BCL11BQ9C0K0 894 aaPredicted RBP32.32■■■□□ 2.76
CRNDE-209ENST00000560208 GGNBP2Q9H3C7 697 aa32.32■■■□□ 2.76
CRNDE-209ENST00000560208 NUP188Q5SRE5 1749 aa32.31■■■□□ 2.76
CRNDE-209ENST00000560208 TNS2Q63HR2 1409 aa32.31■■■□□ 2.76
CRNDE-209ENST00000560208 IL2RBP14784 551 aa32.3■■■□□ 2.76
CRNDE-209ENST00000560208 LTV1Q96GA3 475 aaPredicted RBP32.3■■■□□ 2.76
CRNDE-209ENST00000560208 AMPHP49418 695 aa32.29■■■□□ 2.76
CRNDE-209ENST00000560208 PTF1AQ7RTS3 328 aa32.29■■■□□ 2.76
CRNDE-209ENST00000560208 MYOM1P52179 1685 aa32.29■■■□□ 2.76
CRNDE-209ENST00000560208 LRP5O75197 1615 aa32.29■■■□□ 2.76
CRNDE-209ENST00000560208 KIF20BQ96Q89 1820 aa32.28■■■□□ 2.76
CRNDE-209ENST00000560208 FAM208AQ9UK61 1670 aaKnown RBP32.28■■■□□ 2.76
CRNDE-209ENST00000560208 PLSCR1O15162 318 aa32.27■■■□□ 2.76
CRNDE-209ENST00000560208 HOXC9P31274 260 aa32.27■■■□□ 2.76
CRNDE-209ENST00000560208 RGPD3A6NKT7 1758 aaPredicted RBP32.25■■■□□ 2.75
CRNDE-209ENST00000560208 RGPD4Q7Z3J3 1758 aa32.25■■■□□ 2.75
CRNDE-209ENST00000560208 NBPF14Q5TI25 921 aa32.25■■■□□ 2.75
CRNDE-209ENST00000560208 CARD14Q9BXL6 1004 aa32.24■■■□□ 2.75
CRNDE-209ENST00000560208 RRS1Q15050 365 aaKnown RBP32.23■■■□□ 2.75
CRNDE-209ENST00000560208 KAT6BQ8WYB5 2073 aa32.23■■■□□ 2.75
CRNDE-209ENST00000560208 RGPD2P0DJD1 1756 aa32.22■■■□□ 2.75
CRNDE-209ENST00000560208 RTL1A6NKG5 1358 aa32.19■■■□□ 2.74
CRNDE-209ENST00000560208 NSD3Q9BZ95 1437 aa32.19■■■□□ 2.74
CRNDE-209ENST00000560208 EIF4G2P78344 907 aaKnown RBP eCLIP32.19■■■□□ 2.74
CRNDE-209ENST00000560208 KCNQ2O43526 872 aa32.17■■■□□ 2.74
CRNDE-209ENST00000560208 POLR3GLQ9BT43 218 aa32.17■■■□□ 2.74
CRNDE-209ENST00000560208 NHSQ6T4R5 1651 aa32.15■■■□□ 2.74
CRNDE-209ENST00000560208 HSPA5P11021 654 aaKnown RBP32.15■■■□□ 2.74
CRNDE-209ENST00000560208 ACSBG1Q96GR2 724 aa32.15■■■□□ 2.74
CRNDE-209ENST00000560208 PROM2Q8N271 834 aa32.14■■■□□ 2.74
CRNDE-209ENST00000560208 DDX54Q8TDD1 881 aaKnown RBP32.11■■■□□ 2.73
CRNDE-209ENST00000560208 NBPF6Q5VWK0 638 aa32.1■■■□□ 2.73
CRNDE-209ENST00000560208 NBPF4Q96M43 638 aa32.1■■■□□ 2.73
CRNDE-209ENST00000560208 SMG6Q86US8 1419 aaKnown RBP32.09■■■□□ 2.73
CRNDE-209ENST00000560208 TXNRD1Q16881 649 aa32.09■■■□□ 2.73
CRNDE-209ENST00000560208 HSP90AB2PQ58FF8 381 aa32.09■■■□□ 2.73
CRNDE-209ENST00000560208 INSRP06213 1382 aa32.08■■■□□ 2.73
CRNDE-209ENST00000560208 KIF24Q5T7B8 1368 aa32.08■■■□□ 2.73
CRNDE-209ENST00000560208 CGNL1Q0VF96 1302 aa32.08■■■□□ 2.73
CRNDE-209ENST00000560208 FLT4P35916 1363 aa32.07■■■□□ 2.73
CRNDE-209ENST00000560208 ANO8Q9HCE9 1232 aaPredicted RBP32.07■■■□□ 2.72
CRNDE-209ENST00000560208 BTAF1O14981 1849 aa32.07■■■□□ 2.72
CRNDE-209ENST00000560208 USHBP1Q8N6Y0 703 aa32.05■■■□□ 2.72
CRNDE-209ENST00000560208 ZCRB1Q8TBF4 217 aaKnown RBP32.05■■■□□ 2.72
CRNDE-209ENST00000560208 MEGF6O75095 1541 aa32.05■■■□□ 2.72
CRNDE-209ENST00000560208 EMILIN1Q9Y6C2 1016 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms