RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 BAG6P46379 1132 aa28.82■■■□□ 2.2
CHRNA3-207ENST00000559941 TIMELESSQ9UNS1 1208 aa28.82■■■□□ 2.2
CHRNA3-207ENST00000559941 EDC4Q6P2E9 1401 aaKnown RBP28.82■■■□□ 2.2
CHRNA3-207ENST00000559941 TNS1Q9HBL0 1735 aaKnown RBP28.81■■■□□ 2.2
CHRNA3-207ENST00000559941 PDE3BQ13370 1112 aa28.81■■■□□ 2.2
CHRNA3-207ENST00000559941 FAM196AQ6ZSG2 479 aa28.81■■■□□ 2.2
CHRNA3-207ENST00000559941 A0A1W2PP64 1363 aa28.8■■■□□ 2.2
CHRNA3-207ENST00000559941 NME9Q86XW9 330 aa28.8■■■□□ 2.2
CHRNA3-207ENST00000559941 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
CHRNA3-207ENST00000559941 NINLQ9Y2I6 1382 aa28.79■■■□□ 2.2
CHRNA3-207ENST00000559941 WDR17Q8IZU2 1322 aa28.79■■■□□ 2.2
CHRNA3-207ENST00000559941 USP47Q96K76 1375 aa28.78■■■□□ 2.2
CHRNA3-207ENST00000559941 TOM1L2Q6ZVM7 507 aa28.78■■■□□ 2.2
CHRNA3-207ENST00000559941 ABCC6O95255 1503 aa28.77■■■□□ 2.2
CHRNA3-207ENST00000559941 WNK3Q9BYP7 1800 aa28.75■■■□□ 2.19
CHRNA3-207ENST00000559941 DISP2A7MBM2 1401 aa28.75■■■□□ 2.19
CHRNA3-207ENST00000559941 EN1Q05925 392 aaPredicted RBP28.74■■■□□ 2.19
CHRNA3-207ENST00000559941 LTN1O94822 1766 aa28.74■■■□□ 2.19
CHRNA3-207ENST00000559941 TRIM37O94972 964 aa28.72■■■□□ 2.19
CHRNA3-207ENST00000559941 TMF1P82094 1093 aa28.72■■■□□ 2.19
CHRNA3-207ENST00000559941 CARD10Q9BWT7 1032 aa28.71■■■□□ 2.19
CHRNA3-207ENST00000559941 LRRC37A3O60309 1634 aa28.71■■■□□ 2.19
CHRNA3-207ENST00000559941 OVOS2A0A0J9YW53 1432 aa28.7■■■□□ 2.19
CHRNA3-207ENST00000559941 OVOS2Q6IE36 1432 aa28.7■■■□□ 2.19
CHRNA3-207ENST00000559941 CSB-PGBD3P0DP91 1061 aa28.7■■■□□ 2.18
CHRNA3-207ENST00000559941 PEAK1Q9H792 1746 aa28.67■■■□□ 2.18
CHRNA3-207ENST00000559941 C11orf95C9JLR9 678 aaPredicted RBP28.67■■■□□ 2.18
CHRNA3-207ENST00000559941 DDB1Q16531 1140 aa28.67■■■□□ 2.18
CHRNA3-207ENST00000559941 CDCA7Q9BWT1 371 aaPredicted RBP28.67■■■□□ 2.18
CHRNA3-207ENST00000559941 ANKRD36BQ8N2N9 1353 aa28.66■■■□□ 2.18
CHRNA3-207ENST00000559941 APBA3O96018 575 aa28.65■■■□□ 2.18
CHRNA3-207ENST00000559941 SBF2Q86WG5 1849 aa28.64■■■□□ 2.18
CHRNA3-207ENST00000559941 CCDC7Q96M83 1385 aa28.64■■■□□ 2.18
CHRNA3-207ENST00000559941 SRCAPQ6ZRS2 3230 aa28.64■■■□□ 2.18
CHRNA3-207ENST00000559941 OVOS2A0A0G2JMS6 1433 aa28.64■■■□□ 2.18
CHRNA3-207ENST00000559941 EZH2Q15910 746 aaKnown RBP28.64■■■□□ 2.18
CHRNA3-207ENST00000559941 CAMKK2Q96RR4 588 aa28.64■■■□□ 2.18
CHRNA3-207ENST00000559941 CDCA8Q53HL2 280 aa28.63■■■□□ 2.17
CHRNA3-207ENST00000559941 ERBB3P21860 1342 aa28.63■■■□□ 2.17
CHRNA3-207ENST00000559941 PARD3Q8TEW0 1356 aa28.61■■■□□ 2.17
CHRNA3-207ENST00000559941 COG3Q96JB2 828 aa28.6■■■□□ 2.17
CHRNA3-207ENST00000559941 RREB1Q92766 1687 aa28.58■■■□□ 2.16
CHRNA3-207ENST00000559941 MARCH10Q8NA82 808 aaPredicted RBP28.57■■■□□ 2.16
CHRNA3-207ENST00000559941 ANKRD24Q8TF21 1146 aa28.57■■■□□ 2.16
CHRNA3-207ENST00000559941 IP6K1Q92551 441 aa28.57■■■□□ 2.16
CHRNA3-207ENST00000559941 PSDA5PKW4 1024 aaPredicted RBP28.56■■■□□ 2.16
CHRNA3-207ENST00000559941 CCER1Q8TC90 406 aaPredicted RBP28.56■■■□□ 2.16
CHRNA3-207ENST00000559941 NLRP2Q9NX02 1062 aa28.56■■■□□ 2.16
CHRNA3-207ENST00000559941 BCL9O00512 1426 aa28.55■■■□□ 2.16
CHRNA3-207ENST00000559941 EXOC5O00471 708 aa28.55■■■□□ 2.16
CHRNA3-207ENST00000559941 MYOM1P52179 1685 aa28.54■■■□□ 2.16
CHRNA3-207ENST00000559941 FYB1O15117 783 aa28.53■■■□□ 2.16
CHRNA3-207ENST00000559941 NUP188Q5SRE5 1749 aa28.52■■■□□ 2.16
CHRNA3-207ENST00000559941 FAM208AQ9UK61 1670 aaKnown RBP28.52■■■□□ 2.16
CHRNA3-207ENST00000559941 MAP3K19Q56UN5 1328 aa28.52■■■□□ 2.16
CHRNA3-207ENST00000559941 KIF20BQ96Q89 1820 aa28.52■■■□□ 2.16
CHRNA3-207ENST00000559941 TNS2Q63HR2 1409 aa28.52■■■□□ 2.16
CHRNA3-207ENST00000559941 RGPD3A6NKT7 1758 aaPredicted RBP28.5■■■□□ 2.15
CHRNA3-207ENST00000559941 RGPD4Q7Z3J3 1758 aa28.5■■■□□ 2.15
CHRNA3-207ENST00000559941 R3HDM1Q15032 1099 aaKnown RBP28.5■■■□□ 2.15
CHRNA3-207ENST00000559941 BCL11BQ9C0K0 894 aaPredicted RBP28.5■■■□□ 2.15
CHRNA3-207ENST00000559941 GGNBP2Q9H3C7 697 aa28.5■■■□□ 2.15
CHRNA3-207ENST00000559941 LRP5O75197 1615 aa28.5■■■□□ 2.15
CHRNA3-207ENST00000559941 IL2RBP14784 551 aa28.49■■■□□ 2.15
CHRNA3-207ENST00000559941 FBLN1P23142 703 aa28.49■■■□□ 2.15
CHRNA3-207ENST00000559941 HOXC9P31274 260 aa28.48■■■□□ 2.15
CHRNA3-207ENST00000559941 PLSCR1O15162 318 aa28.47■■■□□ 2.15
CHRNA3-207ENST00000559941 AMPHP49418 695 aa28.47■■■□□ 2.15
CHRNA3-207ENST00000559941 PTF1AQ7RTS3 328 aa28.46■■■□□ 2.15
CHRNA3-207ENST00000559941 LTV1Q96GA3 475 aaPredicted RBP28.45■■■□□ 2.14
CHRNA3-207ENST00000559941 CARD14Q9BXL6 1004 aa28.45■■■□□ 2.14
CHRNA3-207ENST00000559941 RTL1A6NKG5 1358 aa28.44■■■□□ 2.14
CHRNA3-207ENST00000559941 RGPD2P0DJD1 1756 aa28.44■■■□□ 2.14
CHRNA3-207ENST00000559941 NBPF14Q5TI25 921 aa28.43■■■□□ 2.14
CHRNA3-207ENST00000559941 EIF4G2P78344 907 aaKnown RBP eCLIP28.42■■■□□ 2.14
CHRNA3-207ENST00000559941 RRS1Q15050 365 aaKnown RBP28.42■■■□□ 2.14
CHRNA3-207ENST00000559941 NSD3Q9BZ95 1437 aa28.42■■■□□ 2.14
CHRNA3-207ENST00000559941 KAT6BQ8WYB5 2073 aa28.4■■■□□ 2.14
CHRNA3-207ENST00000559941 NHSQ6T4R5 1651 aa28.39■■■□□ 2.14
CHRNA3-207ENST00000559941 HSPA5P11021 654 aaKnown RBP28.38■■■□□ 2.13
CHRNA3-207ENST00000559941 KCNQ2O43526 872 aa28.35■■■□□ 2.13
CHRNA3-207ENST00000559941 PROM2Q8N271 834 aa28.35■■■□□ 2.13
CHRNA3-207ENST00000559941 KIF24Q5T7B8 1368 aa28.35■■■□□ 2.13
CHRNA3-207ENST00000559941 ACSBG1Q96GR2 724 aa28.33■■■□□ 2.13
CHRNA3-207ENST00000559941 POLR3GLQ9BT43 218 aa28.33■■■□□ 2.13
CHRNA3-207ENST00000559941 INSRP06213 1382 aa28.32■■■□□ 2.12
CHRNA3-207ENST00000559941 FLT4P35916 1363 aa28.32■■■□□ 2.12
CHRNA3-207ENST00000559941 NBPF6Q5VWK0 638 aa28.31■■■□□ 2.12
CHRNA3-207ENST00000559941 NBPF4Q96M43 638 aa28.31■■■□□ 2.12
CHRNA3-207ENST00000559941 SMG6Q86US8 1419 aaKnown RBP28.31■■■□□ 2.12
CHRNA3-207ENST00000559941 BTAF1O14981 1849 aa28.3■■■□□ 2.12
CHRNA3-207ENST00000559941 MAP2P11137 1827 aaKnown RBP28.3■■■□□ 2.12
CHRNA3-207ENST00000559941 CGNL1Q0VF96 1302 aa28.3■■■□□ 2.12
CHRNA3-207ENST00000559941 HSP90AB2PQ58FF8 381 aa28.3■■■□□ 2.12
CHRNA3-207ENST00000559941 SHANK3Q9BYB0 1731 aa28.29■■■□□ 2.12
CHRNA3-207ENST00000559941 TXNRD1Q16881 649 aa28.29■■■□□ 2.12
CHRNA3-207ENST00000559941 DDX54Q8TDD1 881 aaKnown RBP28.29■■■□□ 2.12
CHRNA3-207ENST00000559941 MEGF6O75095 1541 aa28.28■■■□□ 2.12
CHRNA3-207ENST00000559941 ANO8Q9HCE9 1232 aaPredicted RBP28.27■■■□□ 2.12
CHRNA3-207ENST00000559941 ANKRD26Q9UPS8 1709 aa28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms