RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 IP6K1Q92551 441 aa19.33■□□□□ 0.68
SMAD6-204ENST00000559931 HOXC9P31274 260 aa19.31■□□□□ 0.68
SMAD6-204ENST00000559931 LTV1Q96GA3 475 aaPredicted RBP19.31■□□□□ 0.68
SMAD6-204ENST00000559931 CFAP53Q96M91 514 aa19.31■□□□□ 0.68
SMAD6-204ENST00000559931 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
SMAD6-204ENST00000559931 HSP90AB2PQ58FF8 381 aa19.3■□□□□ 0.68
SMAD6-204ENST00000559931 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
SMAD6-204ENST00000559931 POTEAQ6S8J7 498 aa19.3■□□□□ 0.68
SMAD6-204ENST00000559931 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
SMAD6-204ENST00000559931 USP21Q9UK80 565 aa19.3■□□□□ 0.68
SMAD6-204ENST00000559931 CSB-PGBD3P0DP91 1061 aa19.29■□□□□ 0.68
SMAD6-204ENST00000559931 FNBP4Q8N3X1 1017 aaPredicted RBP19.29■□□□□ 0.68
SMAD6-204ENST00000559931 AXIN2Q9Y2T1 843 aa19.29■□□□□ 0.68
SMAD6-204ENST00000559931 PLCH1Q4KWH8 1693 aa19.29■□□□□ 0.68
SMAD6-204ENST00000559931 FLT4P35916 1363 aa19.29■□□□□ 0.68
SMAD6-204ENST00000559931 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
SMAD6-204ENST00000559931 RGPD5Q99666 1765 aa19.29■□□□□ 0.68
SMAD6-204ENST00000559931 KIF24Q5T7B8 1368 aa19.28■□□□□ 0.68
SMAD6-204ENST00000559931 RTL1A6NKG5 1358 aa19.27■□□□□ 0.68
SMAD6-204ENST00000559931 ANKRD24Q8TF21 1146 aa19.26■□□□□ 0.67
SMAD6-204ENST00000559931 QTRT2Q9H974 415 aaKnown RBP19.26■□□□□ 0.67
SMAD6-204ENST00000559931 PEAK1Q9H792 1746 aa19.25■□□□□ 0.67
SMAD6-204ENST00000559931 COL18A1P39060 1754 aa19.25■□□□□ 0.67
SMAD6-204ENST00000559931 MIER1Q8N108 512 aa19.25■□□□□ 0.67
SMAD6-204ENST00000559931 NWD2Q9ULI1 1742 aa19.25■□□□□ 0.67
SMAD6-204ENST00000559931 SLIT2O94813 1529 aa19.25■□□□□ 0.67
SMAD6-204ENST00000559931 CAMTA1Q9Y6Y1 1673 aa19.24■□□□□ 0.67
SMAD6-204ENST00000559931 BCL9LQ86UU0 1499 aa19.24■□□□□ 0.67
SMAD6-204ENST00000559931 INSRP06213 1382 aa19.24■□□□□ 0.67
SMAD6-204ENST00000559931 DIAPH1O60610 1272 aaKnown RBP19.24■□□□□ 0.67
SMAD6-204ENST00000559931 ILDR2Q71H61 639 aa19.24■□□□□ 0.67
SMAD6-204ENST00000559931 UNC5CLQ8IV45 518 aa19.24■□□□□ 0.67
SMAD6-204ENST00000559931 CCDC9Q9Y3X0 531 aaKnown RBP19.24■□□□□ 0.67
SMAD6-204ENST00000559931 BLMP54132 1417 aaPredicted RBP19.24■□□□□ 0.67
SMAD6-204ENST00000559931 CDK12Q9NYV4 1490 aaPredicted RBP19.23■□□□□ 0.67
SMAD6-204ENST00000559931 TOM1L2Q6ZVM7 507 aa19.23■□□□□ 0.67
SMAD6-204ENST00000559931 NLRP2Q9NX02 1062 aa19.23■□□□□ 0.67
SMAD6-204ENST00000559931 SMG6Q86US8 1419 aaKnown RBP19.23■□□□□ 0.67
SMAD6-204ENST00000559931 EIF4A2Q14240 407 aaKnown RBP19.22■□□□□ 0.67
SMAD6-204ENST00000559931 TRPC5Q9UL62 973 aaPredicted RBP19.22■□□□□ 0.67
SMAD6-204ENST00000559931 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
SMAD6-204ENST00000559931 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.22■□□□□ 0.67
SMAD6-204ENST00000559931 ABCC6O95255 1503 aa19.21■□□□□ 0.67
SMAD6-204ENST00000559931 U2SURPO15042 1029 aaKnown RBP19.21■□□□□ 0.67
SMAD6-204ENST00000559931 NRAPQ86VF7 1730 aa19.21■□□□□ 0.67
SMAD6-204ENST00000559931 MRS2Q9HD23 443 aa19.21■□□□□ 0.67
SMAD6-204ENST00000559931 LMO7Q8WWI1 1683 aa19.2■□□□□ 0.66
SMAD6-204ENST00000559931 ATRNO75882 1429 aa19.2■□□□□ 0.66
SMAD6-204ENST00000559931 RXRBP28702 533 aa19.2■□□□□ 0.66
SMAD6-204ENST00000559931 LARP1Q6PKG0 1096 aaKnown RBP19.2■□□□□ 0.66
SMAD6-204ENST00000559931 ERBB3P21860 1342 aa19.2■□□□□ 0.66
SMAD6-204ENST00000559931 USP35Q9P2H5 1018 aa19.19■□□□□ 0.66
SMAD6-204ENST00000559931 COL5A2P05997 1499 aaPredicted RBP19.19■□□□□ 0.66
SMAD6-204ENST00000559931 WDR17Q8IZU2 1322 aa19.19■□□□□ 0.66
SMAD6-204ENST00000559931 IL13P35225 146 aa19.18■□□□□ 0.66
SMAD6-204ENST00000559931 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
SMAD6-204ENST00000559931 RBM6P78332 1123 aaKnown RBP19.17■□□□□ 0.66
SMAD6-204ENST00000559931 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
SMAD6-204ENST00000559931 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMAD6-204ENST00000559931 WDR43Q15061 677 aaKnown RBP eCLIP19.16■□□□□ 0.66
SMAD6-204ENST00000559931 VPS72Q15906 364 aa19.16■□□□□ 0.66
SMAD6-204ENST00000559931 NBPF6Q5VWK0 638 aa19.16■□□□□ 0.66
SMAD6-204ENST00000559931 NBPF4Q96M43 638 aa19.16■□□□□ 0.66
SMAD6-204ENST00000559931 EYA1Q99502 592 aa19.16■□□□□ 0.66
SMAD6-204ENST00000559931 RGPD2P0DJD1 1756 aa19.15■□□□□ 0.66
SMAD6-204ENST00000559931 CCER2I3L3R5 266 aa19.15■□□□□ 0.66
SMAD6-204ENST00000559931 USHBP1Q8N6Y0 703 aa19.15■□□□□ 0.66
SMAD6-204ENST00000559931 GJD4Q96KN9 370 aaPredicted RBP19.15■□□□□ 0.66
SMAD6-204ENST00000559931 CARD10Q9BWT7 1032 aa19.15■□□□□ 0.66
SMAD6-204ENST00000559931 CRB1P82279 1406 aa19.14■□□□□ 0.65
SMAD6-204ENST00000559931 HMOX1P09601 288 aa19.13■□□□□ 0.65
SMAD6-204ENST00000559931 SULT6B1Q6IMI4 303 aa19.13■□□□□ 0.65
SMAD6-204ENST00000559931 COL3A1P02461 1466 aaPredicted RBP19.13■□□□□ 0.65
SMAD6-204ENST00000559931 GLI3P10071 1580 aa19.12■□□□□ 0.65
SMAD6-204ENST00000559931 SPATA31A5Q5VU36 1347 aa19.12■□□□□ 0.65
SMAD6-204ENST00000559931 SPATA31A7Q8IWB4 1347 aa19.12■□□□□ 0.65
SMAD6-204ENST00000559931 TCP11L2Q8N4U5 519 aa19.12■□□□□ 0.65
SMAD6-204ENST00000559931 FAM208AQ9UK61 1670 aaKnown RBP19.11■□□□□ 0.65
SMAD6-204ENST00000559931 SPATA31A1Q5TZJ5 1347 aa19.11■□□□□ 0.65
SMAD6-204ENST00000559931 A0A0G2JS52 829 aa19.1■□□□□ 0.65
SMAD6-204ENST00000559931 MYT1Q01538 1121 aa19.1■□□□□ 0.65
SMAD6-204ENST00000559931 RAPGEF4Q8WZA2 1011 aa19.1■□□□□ 0.65
SMAD6-204ENST00000559931 IGSF1Q8N6C5 1336 aa19.09■□□□□ 0.65
SMAD6-204ENST00000559931 AEBP1Q8IUX7 1158 aa19.09■□□□□ 0.65
SMAD6-204ENST00000559931 FAM9BQ8IZU0 186 aa19.09■□□□□ 0.65
SMAD6-204ENST00000559931 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
SMAD6-204ENST00000559931 ADAMTS8Q9UP79 889 aa19.08■□□□□ 0.64
SMAD6-204ENST00000559931 THRAP3Q9Y2W1 955 aaKnown RBP19.08■□□□□ 0.64
SMAD6-204ENST00000559931 RGS12O14924 1447 aa19.08■□□□□ 0.64
SMAD6-204ENST00000559931 NEFMP07197 916 aa19.07■□□□□ 0.64
SMAD6-204ENST00000559931 TATP17735 454 aaPredicted RBP19.07■□□□□ 0.64
SMAD6-204ENST00000559931 FAM98CQ17RN3 349 aaKnown RBP19.07■□□□□ 0.64
SMAD6-204ENST00000559931 PNNQ9H307 717 aaKnown RBP19.07■□□□□ 0.64
SMAD6-204ENST00000559931 FCHSD2O94868 740 aa19.06■□□□□ 0.64
SMAD6-204ENST00000559931 IL2RBP14784 551 aa19.06■□□□□ 0.64
SMAD6-204ENST00000559931 BRWD3Q6RI45 1802 aa19.05■□□□□ 0.64
SMAD6-204ENST00000559931 RGPD1P0DJD0 1748 aa19.05■□□□□ 0.64
SMAD6-204ENST00000559931 PRKAR2BP31323 418 aa19.04■□□□□ 0.64
SMAD6-204ENST00000559931 BARGINQ6ZT62 677 aa19.04■□□□□ 0.64
SMAD6-204ENST00000559931 SEPT12Q8IYM1 358 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms