RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 BMP1P13497 986 aa8.47□□□□□ -1.05
SPG11-218ENST00000559754 DHX9Q08211 1270 aaKnown RBP8.47□□□□□ -1.05
SPG11-218ENST00000559754 NBPF20Q3BBV1 942 aa8.47□□□□□ -1.05
SPG11-218ENST00000559754 MRPL14Q6P1L8 145 aaKnown RBP8.47□□□□□ -1.05
SPG11-218ENST00000559754 TRIM46Q7Z4K8 759 aa8.47□□□□□ -1.05
SPG11-218ENST00000559754 DZIP3Q86Y13 1208 aaKnown RBP8.47□□□□□ -1.05
SPG11-218ENST00000559754 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
SPG11-218ENST00000559754 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
SPG11-218ENST00000559754 OCSTAMPQ9BR26 566 aa8.47□□□□□ -1.05
SPG11-218ENST00000559754 PGPEP1Q9NXJ5 209 aa8.46□□□□□ -1.06
SPG11-218ENST00000559754 ZBBXA8MT70 800 aa8.45□□□□□ -1.06
SPG11-218ENST00000559754 UPP2O95045 317 aa8.45□□□□□ -1.06
SPG11-218ENST00000559754 SNRPBP14678 240 aaKnown RBP8.45□□□□□ -1.06
SPG11-218ENST00000559754 ZNF592Q92610 1267 aa8.45□□□□□ -1.06
SPG11-218ENST00000559754 TRIM52Q96A61 297 aa8.45□□□□□ -1.06
SPG11-218ENST00000559754 ZFAND3Q9H8U3 227 aa8.45□□□□□ -1.06
SPG11-218ENST00000559754 NDUFB9Q9Y6M9 179 aa8.45□□□□□ -1.06
SPG11-218ENST00000559754 PPP1R26Q5T8A7 1209 aaPredicted RBP8.44□□□□□ -1.06
SPG11-218ENST00000559754 MTMR14Q8NCE2 650 aa8.44□□□□□ -1.06
SPG11-218ENST00000559754 ZFP42Q96MM3 310 aa8.44□□□□□ -1.06
SPG11-218ENST00000559754 PRM3Q9NNZ6 103 aa8.44□□□□□ -1.06
SPG11-218ENST00000559754 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
SPG11-218ENST00000559754 MCCD1P59942 119 aaPredicted RBP8.42□□□□□ -1.06
SPG11-218ENST00000559754 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
SPG11-218ENST00000559754 MEIOBQ8N635 442 aa8.42□□□□□ -1.06
SPG11-218ENST00000559754 PURBQ96QR8 312 aaKnown RBP8.42□□□□□ -1.06
SPG11-218ENST00000559754 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
SPG11-218ENST00000559754 SEPT12Q8IYM1 358 aa8.41□□□□□ -1.06
SPG11-218ENST00000559754 TSEN34Q9BSV6 310 aaKnown RBP8.41□□□□□ -1.06
SPG11-218ENST00000559754 FBXO45P0C2W1 286 aa8.4□□□□□ -1.06
SPG11-218ENST00000559754 NR1H3Q13133 447 aa8.4□□□□□ -1.06
SPG11-218ENST00000559754 LINC00528Q8N1L1 170 aa8.4□□□□□ -1.06
SPG11-218ENST00000559754 BMP2P12643 396 aa8.39□□□□□ -1.07
SPG11-218ENST00000559754 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
SPG11-218ENST00000559754 PCDHB9Q9Y5E1 797 aa8.39□□□□□ -1.07
SPG11-218ENST00000559754 ESPNB1AK53 854 aa8.38□□□□□ -1.07
SPG11-218ENST00000559754 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
SPG11-218ENST00000559754 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
SPG11-218ENST00000559754 Q6ZVU0 165 aa8.38□□□□□ -1.07
SPG11-218ENST00000559754 RAB15P59190 212 aa8.37□□□□□ -1.07
SPG11-218ENST00000559754 WFS1O76024 890 aa8.36□□□□□ -1.07
SPG11-218ENST00000559754 RNF20Q5VTR2 975 aa8.36□□□□□ -1.07
SPG11-218ENST00000559754 ERVH48-1M5A8F1 160 aa8.35□□□□□ -1.07
SPG11-218ENST00000559754 TERTO14746 1132 aaKnown RBP8.35□□□□□ -1.07
SPG11-218ENST00000559754 NPAS3Q8IXF0 933 aa8.35□□□□□ -1.07
SPG11-218ENST00000559754 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
SPG11-218ENST00000559754 NXF1Q9UBU9 619 aaKnown RBP8.35□□□□□ -1.07
SPG11-218ENST00000559754 MAN1A2O60476 641 aa8.34□□□□□ -1.07
SPG11-218ENST00000559754 CBLBQ13191 982 aa8.34□□□□□ -1.07
SPG11-218ENST00000559754 GPR37L1O60883 481 aa8.33□□□□□ -1.08
SPG11-218ENST00000559754 GIGYF1O75420 1035 aaPredicted RBP8.33□□□□□ -1.08
SPG11-218ENST00000559754 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
SPG11-218ENST00000559754 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
SPG11-218ENST00000559754 TMPRSS4Q9NRS4 437 aa8.33□□□□□ -1.08
SPG11-218ENST00000559754 SOS2Q07890 1332 aaPredicted RBP8.32□□□□□ -1.08
SPG11-218ENST00000559754 SPINT1O43278 529 aa8.32□□□□□ -1.08
SPG11-218ENST00000559754 TBC1D2BQ9UPU7 963 aa8.32□□□□□ -1.08
SPG11-218ENST00000559754 TTLL8A6PVC2 850 aa8.31□□□□□ -1.08
SPG11-218ENST00000559754 ADH1AP07327 375 aa8.31□□□□□ -1.08
SPG11-218ENST00000559754 EIF4G2P78344 907 aaKnown RBP eCLIP8.31□□□□□ -1.08
SPG11-218ENST00000559754 MCM6Q14566 821 aa8.3□□□□□ -1.08
SPG11-218ENST00000559754 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
SPG11-218ENST00000559754 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
SPG11-218ENST00000559754 LILRA1O75019 489 aa8.29□□□□□ -1.08
SPG11-218ENST00000559754 RELBQ01201 579 aa8.29□□□□□ -1.08
SPG11-218ENST00000559754 CYLDQ9NQC7 956 aa8.29□□□□□ -1.08
SPG11-218ENST00000559754 SOBPA7XYQ1 873 aa8.28□□□□□ -1.08
SPG11-218ENST00000559754 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
SPG11-218ENST00000559754 AGBL1Q96MI9 1066 aa8.28□□□□□ -1.08
SPG11-218ENST00000559754 ESF1Q9H501 851 aaKnown RBP8.28□□□□□ -1.08
SPG11-218ENST00000559754 GDPD2Q9HCC8 539 aa8.28□□□□□ -1.08
SPG11-218ENST00000559754 ADD1P35611 737 aaKnown RBP8.27□□□□□ -1.09
SPG11-218ENST00000559754 ABL2P42684 1182 aa8.27□□□□□ -1.09
SPG11-218ENST00000559754 PTGIRP43119 386 aa8.27□□□□□ -1.09
SPG11-218ENST00000559754 TMEM132AQ24JP5 1023 aa8.27□□□□□ -1.09
SPG11-218ENST00000559754 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
SPG11-218ENST00000559754 IRF7Q92985 503 aa8.27□□□□□ -1.09
SPG11-218ENST00000559754 DNMT3LQ9UJW3 386 aa8.27□□□□□ -1.09
SPG11-218ENST00000559754 H3BM21 787 aa8.26□□□□□ -1.09
SPG11-218ENST00000559754 ERVK-9P63128 1117 aa8.26□□□□□ -1.09
SPG11-218ENST00000559754 FLIIQ13045 1269 aa8.26□□□□□ -1.09
SPG11-218ENST00000559754 IRF5Q13568 498 aa8.26□□□□□ -1.09
SPG11-218ENST00000559754 WWC1Q8IX03 1113 aa8.26□□□□□ -1.09
SPG11-218ENST00000559754 POLMQ9NP87 494 aaPredicted RBP8.26□□□□□ -1.09
SPG11-218ENST00000559754 CEP126Q9P2H0 1117 aa8.26□□□□□ -1.09
SPG11-218ENST00000559754 PCDHB11Q9Y5F2 797 aa8.26□□□□□ -1.09
SPG11-218ENST00000559754 ATP5J2-PTCD1G3V325 749 aa8.25□□□□□ -1.09
SPG11-218ENST00000559754 INSM2Q96T92 566 aaPredicted RBP8.25□□□□□ -1.09
SPG11-218ENST00000559754 ZNF395Q9H8N7 513 aaPredicted RBP8.25□□□□□ -1.09
SPG11-218ENST00000559754 FIGNL2A6NMB9 653 aa8.24□□□□□ -1.09
SPG11-218ENST00000559754 WIPF1O43516 503 aa8.24□□□□□ -1.09
SPG11-218ENST00000559754 CYP2U1Q7Z449 544 aa8.24□□□□□ -1.09
SPG11-218ENST00000559754 SOX11P35716 441 aa8.23□□□□□ -1.09
SPG11-218ENST00000559754 CTSOP43234 321 aaPredicted RBP8.23□□□□□ -1.09
SPG11-218ENST00000559754 VEGFBP49765 207 aa8.23□□□□□ -1.09
SPG11-218ENST00000559754 VAC14Q08AM6 782 aa8.23□□□□□ -1.09
SPG11-218ENST00000559754 SLFNL1Q499Z3 407 aa8.23□□□□□ -1.09
SPG11-218ENST00000559754 RAD21O60216 631 aa8.22□□□□□ -1.09
SPG11-218ENST00000559754 PPFIA3O75145 1194 aa8.22□□□□□ -1.09
SPG11-218ENST00000559754 MYCP01106 439 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms