RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 ZBTB33Q86T24 672 aa9.24□□□□□ -0.93
CTDSPL2-207ENST00000559738 SLC10A4Q96EP9 437 aa9.24□□□□□ -0.93
CTDSPL2-207ENST00000559738 ZFP42Q96MM3 310 aa9.24□□□□□ -0.93
CTDSPL2-207ENST00000559738 PTK2Q05397 1052 aa9.23□□□□□ -0.93
CTDSPL2-207ENST00000559738 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
CTDSPL2-207ENST00000559738 PNMA1Q8ND90 353 aa9.23□□□□□ -0.93
CTDSPL2-207ENST00000559738 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
CTDSPL2-207ENST00000559738 SCARF1Q14162 830 aa9.22□□□□□ -0.93
CTDSPL2-207ENST00000559738 GPSM3Q9Y4H4 160 aa9.22□□□□□ -0.93
CTDSPL2-207ENST00000559738 CCDC116Q8IYX3 515 aa9.21□□□□□ -0.94
CTDSPL2-207ENST00000559738 ADAM32Q8TC27 787 aa9.21□□□□□ -0.94
CTDSPL2-207ENST00000559738 WFS1O76024 890 aa9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 NFX1Q12986 1120 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 KCTD15Q96SI1 283 aaPredicted RBP9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 CDV3Q9UKY7 258 aaKnown RBP9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
CTDSPL2-207ENST00000559738 FBXO45P0C2W1 286 aa9.18□□□□□ -0.94
CTDSPL2-207ENST00000559738 MCM6Q14566 821 aa9.18□□□□□ -0.94
CTDSPL2-207ENST00000559738 MEIOBQ8N635 442 aa9.18□□□□□ -0.94
CTDSPL2-207ENST00000559738 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
CTDSPL2-207ENST00000559738 PPP1R26Q5T8A7 1209 aaPredicted RBP9.17□□□□□ -0.94
CTDSPL2-207ENST00000559738 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
CTDSPL2-207ENST00000559738 TBC1D2BQ9UPU7 963 aa9.17□□□□□ -0.94
CTDSPL2-207ENST00000559738 ZBBXA8MT70 800 aa9.16□□□□□ -0.94
CTDSPL2-207ENST00000559738 UPP2O95045 317 aa9.16□□□□□ -0.94
CTDSPL2-207ENST00000559738 BMP2P12643 396 aa9.16□□□□□ -0.94
CTDSPL2-207ENST00000559738 INTS6LQ5JSJ4 861 aaKnown RBP9.16□□□□□ -0.94
CTDSPL2-207ENST00000559738 SOBPA7XYQ1 873 aa9.15□□□□□ -0.94
CTDSPL2-207ENST00000559738 APBB1O00213 710 aa9.15□□□□□ -0.94
CTDSPL2-207ENST00000559738 NBPF20Q3BBV1 942 aa9.15□□□□□ -0.94
CTDSPL2-207ENST00000559738 PGPEP1Q9NXJ5 209 aa9.15□□□□□ -0.94
CTDSPL2-207ENST00000559738 DZIP3Q86Y13 1208 aaKnown RBP9.14□□□□□ -0.95
CTDSPL2-207ENST00000559738 RAB15P59190 212 aa9.13□□□□□ -0.95
CTDSPL2-207ENST00000559738 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
CTDSPL2-207ENST00000559738 CBLBQ13191 982 aa9.13□□□□□ -0.95
CTDSPL2-207ENST00000559738 IRF5Q13568 498 aa9.13□□□□□ -0.95
CTDSPL2-207ENST00000559738 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
CTDSPL2-207ENST00000559738 GDPD2Q9HCC8 539 aa9.13□□□□□ -0.95
CTDSPL2-207ENST00000559738 NXF1Q9UBU9 619 aaKnown RBP9.13□□□□□ -0.95
CTDSPL2-207ENST00000559738 VEGFBP49765 207 aa9.12□□□□□ -0.95
CTDSPL2-207ENST00000559738 NR1H3Q13133 447 aa9.12□□□□□ -0.95
CTDSPL2-207ENST00000559738 MAN1A2O60476 641 aa9.11□□□□□ -0.95
CTDSPL2-207ENST00000559738 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
CTDSPL2-207ENST00000559738 Q6ZVU0 165 aa9.1□□□□□ -0.95
CTDSPL2-207ENST00000559738 PCDHB9Q9Y5E1 797 aa9.1□□□□□ -0.95
CTDSPL2-207ENST00000559738 SLC16A10Q8TF71 515 aa9.09□□□□□ -0.95
CTDSPL2-207ENST00000559738 TMPRSS4Q9NRS4 437 aa9.09□□□□□ -0.95
CTDSPL2-207ENST00000559738 COG6Q9Y2V7 657 aa9.09□□□□□ -0.95
CTDSPL2-207ENST00000559738 ESPNB1AK53 854 aa9.08□□□□□ -0.96
CTDSPL2-207ENST00000559738 ZNF784Q8NCA9 323 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-207ENST00000559738 POM121Q96HA1 1249 aa9.08□□□□□ -0.96
CTDSPL2-207ENST00000559738 PRM3Q9NNZ6 103 aa9.08□□□□□ -0.96
CTDSPL2-207ENST00000559738 SOS2Q07890 1332 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-207ENST00000559738 H3BM21 787 aa9.07□□□□□ -0.96
CTDSPL2-207ENST00000559738 ERVH48-1M5A8F1 160 aa9.07□□□□□ -0.96
CTDSPL2-207ENST00000559738 ABL2P42684 1182 aa9.07□□□□□ -0.96
CTDSPL2-207ENST00000559738 NPAS3Q8IXF0 933 aa9.07□□□□□ -0.96
CTDSPL2-207ENST00000559738 AGBL1Q96MI9 1066 aa9.07□□□□□ -0.96
CTDSPL2-207ENST00000559738 DNMT3LQ9UJW3 386 aa9.07□□□□□ -0.96
CTDSPL2-207ENST00000559738 WIPF1O43516 503 aa9.06□□□□□ -0.96
CTDSPL2-207ENST00000559738 GIGYF1O75420 1035 aaPredicted RBP9.06□□□□□ -0.96
CTDSPL2-207ENST00000559738 RELBQ01201 579 aa9.06□□□□□ -0.96
CTDSPL2-207ENST00000559738 FLIIQ13045 1269 aa9.06□□□□□ -0.96
CTDSPL2-207ENST00000559738 TTLL8A6PVC2 850 aa9.05□□□□□ -0.96
CTDSPL2-207ENST00000559738 SPINT1O43278 529 aa9.04□□□□□ -0.96
CTDSPL2-207ENST00000559738 VAC14Q08AM6 782 aa9.04□□□□□ -0.96
CTDSPL2-207ENST00000559738 SEPT12Q8IYM1 358 aa9.04□□□□□ -0.96
CTDSPL2-207ENST00000559738 IRF7Q92985 503 aa9.04□□□□□ -0.96
CTDSPL2-207ENST00000559738 LILRA1O75019 489 aa9.03□□□□□ -0.96
CTDSPL2-207ENST00000559738 CYLDQ9NQC7 956 aa9.03□□□□□ -0.96
CTDSPL2-207ENST00000559738 ERBB4Q15303 1308 aa9.03□□□□□ -0.96
CTDSPL2-207ENST00000559738 FIGNL2A6NMB9 653 aa9.02□□□□□ -0.97
CTDSPL2-207ENST00000559738 ADH1AP07327 375 aa9.02□□□□□ -0.97
CTDSPL2-207ENST00000559738 GMPRP36959 345 aa9.02□□□□□ -0.97
CTDSPL2-207ENST00000559738 MCCD1P59942 119 aaPredicted RBP9.02□□□□□ -0.97
CTDSPL2-207ENST00000559738 ZNF330Q9Y3S2 320 aaPredicted RBP9.02□□□□□ -0.97
CTDSPL2-207ENST00000559738 ADD1P35611 737 aaKnown RBP9.01□□□□□ -0.97
CTDSPL2-207ENST00000559738 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.01□□□□□ -0.97
CTDSPL2-207ENST00000559738 INSM2Q96T92 566 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-207ENST00000559738 ZNF395Q9H8N7 513 aaPredicted RBP9.01□□□□□ -0.97
CTDSPL2-207ENST00000559738 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
CTDSPL2-207ENST00000559738 UBTFP17480 764 aaKnown RBP9□□□□□ -0.97
CTDSPL2-207ENST00000559738 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
CTDSPL2-207ENST00000559738 INSM1Q01101 510 aaPredicted RBP9□□□□□ -0.97
CTDSPL2-207ENST00000559738 POLMQ9NP87 494 aaPredicted RBP9□□□□□ -0.97
CTDSPL2-207ENST00000559738 PPFIA3O75145 1194 aa8.99□□□□□ -0.97
CTDSPL2-207ENST00000559738 EIF4G2P78344 907 aaKnown RBP eCLIP8.99□□□□□ -0.97
CTDSPL2-207ENST00000559738 WASHC4Q2M389 1173 aa8.99□□□□□ -0.97
CTDSPL2-207ENST00000559738 KDF1Q8NAX2 398 aaPredicted RBP8.98□□□□□ -0.97
CTDSPL2-207ENST00000559738 ZNF592Q92610 1267 aa8.98□□□□□ -0.97
CTDSPL2-207ENST00000559738 PTSQ03393 145 aa8.97□□□□□ -0.97
CTDSPL2-207ENST00000559738 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
CTDSPL2-207ENST00000559738 CLUAP1Q96AJ1 413 aa8.97□□□□□ -0.97
CTDSPL2-207ENST00000559738 RAD21O60216 631 aa8.96□□□□□ -0.98
CTDSPL2-207ENST00000559738 VSIG8P0DPA2 414 aa8.96□□□□□ -0.98
CTDSPL2-207ENST00000559738 PTGIRP43119 386 aa8.96□□□□□ -0.98
CTDSPL2-207ENST00000559738 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms