RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 SLIT2O94813 1529 aa12.42□□□□□ -0.42
HMG20A-209ENST00000559728 CHRNA2Q15822 529 aa12.41□□□□□ -0.42
HMG20A-209ENST00000559728 KCNH5Q8NCM2 988 aa12.41□□□□□ -0.42
HMG20A-209ENST00000559728 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
HMG20A-209ENST00000559728 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.42
HMG20A-209ENST00000559728 MAP3K19Q56UN5 1328 aa12.4□□□□□ -0.42
HMG20A-209ENST00000559728 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
HMG20A-209ENST00000559728 SOX12O15370 315 aa12.4□□□□□ -0.42
HMG20A-209ENST00000559728 ILDR2Q71H61 639 aa12.4□□□□□ -0.42
HMG20A-209ENST00000559728 C8orf37Q96NL8 207 aa12.4□□□□□ -0.42
HMG20A-209ENST00000559728 AATKQ6ZMQ8 1374 aa12.4□□□□□ -0.42
HMG20A-209ENST00000559728 PRDM11Q9NQV5 511 aa12.39□□□□□ -0.43
HMG20A-209ENST00000559728 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
HMG20A-209ENST00000559728 AFF2P51816 1311 aa12.38□□□□□ -0.43
HMG20A-209ENST00000559728 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
HMG20A-209ENST00000559728 RRS1Q15050 365 aaKnown RBP12.38□□□□□ -0.43
HMG20A-209ENST00000559728 CC2D1BQ5T0F9 858 aaKnown RBP12.38□□□□□ -0.43
HMG20A-209ENST00000559728 POLKQ9UBT6 870 aa12.38□□□□□ -0.43
HMG20A-209ENST00000559728 LMO7Q8WWI1 1683 aa12.38□□□□□ -0.43
HMG20A-209ENST00000559728 NGLY1Q96IV0 654 aa12.37□□□□□ -0.43
HMG20A-209ENST00000559728 EMILIN1Q9Y6C2 1016 aa12.37□□□□□ -0.43
HMG20A-209ENST00000559728 COL18A1P39060 1754 aa12.37□□□□□ -0.43
HMG20A-209ENST00000559728 KIF20BQ96Q89 1820 aa12.37□□□□□ -0.43
HMG20A-209ENST00000559728 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
HMG20A-209ENST00000559728 MORC1Q86VD1 984 aa12.36□□□□□ -0.43
HMG20A-209ENST00000559728 BTG4Q9NY30 223 aa12.36□□□□□ -0.43
HMG20A-209ENST00000559728 SMG6Q86US8 1419 aaKnown RBP12.36□□□□□ -0.43
HMG20A-209ENST00000559728 PARD3Q8TEW0 1356 aa12.35□□□□□ -0.43
HMG20A-209ENST00000559728 HOXC9P31274 260 aa12.35□□□□□ -0.43
HMG20A-209ENST00000559728 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
HMG20A-209ENST00000559728 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
HMG20A-209ENST00000559728 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
HMG20A-209ENST00000559728 IP6K1Q92551 441 aa12.35□□□□□ -0.43
HMG20A-209ENST00000559728 RBM42Q9BTD8 480 aaKnown RBP12.35□□□□□ -0.43
HMG20A-209ENST00000559728 ATRNO75882 1429 aa12.35□□□□□ -0.43
HMG20A-209ENST00000559728 COL14A1Q05707 1796 aaKnown RBP12.34□□□□□ -0.43
HMG20A-209ENST00000559728 SPDYE2BA6NHP3 402 aa12.34□□□□□ -0.43
HMG20A-209ENST00000559728 SPDYE6P0CI01 402 aa12.34□□□□□ -0.43
HMG20A-209ENST00000559728 SPDYE2Q495Y8 402 aa12.34□□□□□ -0.43
HMG20A-209ENST00000559728 USP21Q9UK80 565 aa12.34□□□□□ -0.43
HMG20A-209ENST00000559728 PEAK1Q9H792 1746 aa12.34□□□□□ -0.43
HMG20A-209ENST00000559728 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
HMG20A-209ENST00000559728 ABCC6O95255 1503 aa12.33□□□□□ -0.44
HMG20A-209ENST00000559728 CNGB1Q14028 1251 aaPredicted RBP12.33□□□□□ -0.44
HMG20A-209ENST00000559728 HSP90AB2PQ58FF8 381 aa12.33□□□□□ -0.44
HMG20A-209ENST00000559728 ANKRD26Q9UPS8 1709 aa12.33□□□□□ -0.44
HMG20A-209ENST00000559728 PLCH1Q4KWH8 1693 aa12.32□□□□□ -0.44
HMG20A-209ENST00000559728 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
HMG20A-209ENST00000559728 NRAPQ86VF7 1730 aa12.32□□□□□ -0.44
HMG20A-209ENST00000559728 ZBTB7CA1YPR0 619 aa12.32□□□□□ -0.44
HMG20A-209ENST00000559728 VPS72Q15906 364 aa12.32□□□□□ -0.44
HMG20A-209ENST00000559728 LARP1Q6PKG0 1096 aaKnown RBP12.32□□□□□ -0.44
HMG20A-209ENST00000559728 INSRP06213 1382 aa12.31□□□□□ -0.44
HMG20A-209ENST00000559728 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
HMG20A-209ENST00000559728 BLMP54132 1417 aaPredicted RBP12.31□□□□□ -0.44
HMG20A-209ENST00000559728 PPP2R1AP30153 589 aa12.31□□□□□ -0.44
HMG20A-209ENST00000559728 ZNF772Q68DY9 489 aaPredicted RBP12.31□□□□□ -0.44
HMG20A-209ENST00000559728 QTRT2Q9H974 415 aaKnown RBP12.31□□□□□ -0.44
HMG20A-209ENST00000559728 ERBB3P21860 1342 aa12.31□□□□□ -0.44
HMG20A-209ENST00000559728 FLT4P35916 1363 aa12.3□□□□□ -0.44
HMG20A-209ENST00000559728 AMPHP49418 695 aa12.3□□□□□ -0.44
HMG20A-209ENST00000559728 MTHFSP49914 203 aa12.3□□□□□ -0.44
HMG20A-209ENST00000559728 ANKRD24Q8TF21 1146 aa12.3□□□□□ -0.44
HMG20A-209ENST00000559728 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
HMG20A-209ENST00000559728 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
HMG20A-209ENST00000559728 WDR17Q8IZU2 1322 aa12.3□□□□□ -0.44
HMG20A-209ENST00000559728 NWD2Q9ULI1 1742 aa12.29□□□□□ -0.44
HMG20A-209ENST00000559728 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
HMG20A-209ENST00000559728 PRKRIP1Q9H875 184 aaPredicted RBP12.29□□□□□ -0.44
HMG20A-209ENST00000559728 STRN4Q9NRL3 753 aa12.29□□□□□ -0.44
HMG20A-209ENST00000559728 TRPC5Q9UL62 973 aaPredicted RBP12.29□□□□□ -0.44
HMG20A-209ENST00000559728 SPATA31A1Q5TZJ5 1347 aa12.29□□□□□ -0.44
HMG20A-209ENST00000559728 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.28□□□□□ -0.44
HMG20A-209ENST00000559728 COL3A1P02461 1466 aaPredicted RBP12.28□□□□□ -0.44
HMG20A-209ENST00000559728 CDK12Q9NYV4 1490 aaPredicted RBP12.28□□□□□ -0.44
HMG20A-209ENST00000559728 GLI3P10071 1580 aa12.28□□□□□ -0.44
HMG20A-209ENST00000559728 PPM1GO15355 546 aaPredicted RBP12.27□□□□□ -0.45
HMG20A-209ENST00000559728 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.45
HMG20A-209ENST00000559728 IL13P35225 146 aa12.27□□□□□ -0.45
HMG20A-209ENST00000559728 EIF4A2Q14240 407 aaKnown RBP12.27□□□□□ -0.45
HMG20A-209ENST00000559728 RALBP1Q15311 655 aa12.27□□□□□ -0.45
HMG20A-209ENST00000559728 NBPF6Q5VWK0 638 aa12.27□□□□□ -0.45
HMG20A-209ENST00000559728 NBPF4Q96M43 638 aa12.27□□□□□ -0.45
HMG20A-209ENST00000559728 LTN1O94822 1766 aa12.27□□□□□ -0.45
HMG20A-209ENST00000559728 CRB1P82279 1406 aa12.27□□□□□ -0.45
HMG20A-209ENST00000559728 NCAPD2Q15021 1401 aa12.27□□□□□ -0.45
HMG20A-209ENST00000559728 LTV1Q96GA3 475 aaPredicted RBP12.26□□□□□ -0.45
HMG20A-209ENST00000559728 CARD10Q9BWT7 1032 aa12.26□□□□□ -0.45
HMG20A-209ENST00000559728 EVA1CP58658 441 aa12.25□□□□□ -0.45
HMG20A-209ENST00000559728 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
HMG20A-209ENST00000559728 EYA1Q99502 592 aa12.25□□□□□ -0.45
HMG20A-209ENST00000559728 DISP2A7MBM2 1401 aa12.25□□□□□ -0.45
HMG20A-209ENST00000559728 TOM1L2Q6ZVM7 507 aa12.24□□□□□ -0.45
HMG20A-209ENST00000559728 RGPD5Q99666 1765 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 RGS12O14924 1447 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 MYBBP1AQ9BQG0 1328 aaKnown RBP12.23□□□□□ -0.45
HMG20A-209ENST00000559728 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 RXRBP28702 533 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms