RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 OVOS2Q6IE36 1432 aa13.32□□□□□ -0.28
SNRPA1-208ENST00000559686 LMO7Q8WWI1 1683 aa13.32□□□□□ -0.28
SNRPA1-208ENST00000559686 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
SNRPA1-208ENST00000559686 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
SNRPA1-208ENST00000559686 CEP350Q5VT06 3117 aa13.31□□□□□ -0.28
SNRPA1-208ENST00000559686 ATP7BP35670 1465 aa13.3□□□□□ -0.28
SNRPA1-208ENST00000559686 NUDT16Q96DE0 195 aaKnown RBP13.3□□□□□ -0.28
SNRPA1-208ENST00000559686 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
SNRPA1-208ENST00000559686 PLSCR1O15162 318 aa13.29□□□□□ -0.28
SNRPA1-208ENST00000559686 GIGYF1O75420 1035 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-208ENST00000559686 PROM2Q8N271 834 aa13.29□□□□□ -0.28
SNRPA1-208ENST00000559686 ABTB2Q8N961 1025 aa13.29□□□□□ -0.28
SNRPA1-208ENST00000559686 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
SNRPA1-208ENST00000559686 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
SNRPA1-208ENST00000559686 AKAP12Q02952 1782 aa13.28□□□□□ -0.28
SNRPA1-208ENST00000559686 DDB1Q16531 1140 aa13.28□□□□□ -0.28
SNRPA1-208ENST00000559686 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-208ENST00000559686 KLHL34Q8N239 644 aa13.28□□□□□ -0.28
SNRPA1-208ENST00000559686 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
SNRPA1-208ENST00000559686 THRAP3Q9Y2W1 955 aaKnown RBP13.28□□□□□ -0.28
SNRPA1-208ENST00000559686 GPR162Q16538 588 aa13.27□□□□□ -0.29
SNRPA1-208ENST00000559686 ACEP12821 1306 aa13.27□□□□□ -0.29
SNRPA1-208ENST00000559686 CRB1P82279 1406 aa13.26□□□□□ -0.29
SNRPA1-208ENST00000559686 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
SNRPA1-208ENST00000559686 ARHGEF28Q8N1W1 1705 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-208ENST00000559686 WNK3Q9BYP7 1800 aa13.26□□□□□ -0.29
SNRPA1-208ENST00000559686 GOLGB1Q14789 3259 aaKnown RBP13.26□□□□□ -0.29
SNRPA1-208ENST00000559686 C11orf95C9JLR9 678 aaPredicted RBP13.25□□□□□ -0.29
SNRPA1-208ENST00000559686 POLA2Q14181 598 aa13.25□□□□□ -0.29
SNRPA1-208ENST00000559686 SLC15A2Q16348 729 aa13.25□□□□□ -0.29
SNRPA1-208ENST00000559686 ARXQ96QS3 562 aa13.25□□□□□ -0.29
SNRPA1-208ENST00000559686 MTFR1LQ9H019 292 aa13.25□□□□□ -0.29
SNRPA1-208ENST00000559686 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
SNRPA1-208ENST00000559686 CPDO75976 1380 aa13.24□□□□□ -0.29
SNRPA1-208ENST00000559686 GCP02774 474 aa13.24□□□□□ -0.29
SNRPA1-208ENST00000559686 TOM1L2Q6ZVM7 507 aa13.24□□□□□ -0.29
SNRPA1-208ENST00000559686 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
SNRPA1-208ENST00000559686 CDK19Q9BWU1 502 aa13.24□□□□□ -0.29
SNRPA1-208ENST00000559686 USP19O94966 1318 aa13.22□□□□□ -0.29
SNRPA1-208ENST00000559686 NLRP13Q86W25 1043 aa13.22□□□□□ -0.29
SNRPA1-208ENST00000559686 SGIP1Q9BQI5 828 aa13.22□□□□□ -0.29
SNRPA1-208ENST00000559686 POLR3AO14802 1390 aaPredicted RBP13.21□□□□□ -0.29
SNRPA1-208ENST00000559686 SHANK3Q9BYB0 1731 aa13.2□□□□□ -0.3
SNRPA1-208ENST00000559686 DCAF11Q8TEB1 546 aa13.2□□□□□ -0.3
SNRPA1-208ENST00000559686 RGPD5Q99666 1765 aa13.2□□□□□ -0.3
SNRPA1-208ENST00000559686 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
SNRPA1-208ENST00000559686 CCDC61Q9Y6R9 512 aa13.19□□□□□ -0.3
SNRPA1-208ENST00000559686 SOX12O15370 315 aa13.18□□□□□ -0.3
SNRPA1-208ENST00000559686 CSB-PGBD3P0DP91 1061 aa13.17□□□□□ -0.3
SNRPA1-208ENST00000559686 NLRP6P59044 892 aa13.17□□□□□ -0.3
SNRPA1-208ENST00000559686 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
SNRPA1-208ENST00000559686 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
SNRPA1-208ENST00000559686 ZBTB22O15209 634 aa13.16□□□□□ -0.3
SNRPA1-208ENST00000559686 ZNF827Q17R98 1081 aa13.16□□□□□ -0.3
SNRPA1-208ENST00000559686 AXIN2Q9Y2T1 843 aa13.16□□□□□ -0.3
SNRPA1-208ENST00000559686 COL18A1P39060 1754 aa13.16□□□□□ -0.3
SNRPA1-208ENST00000559686 AATKQ6ZMQ8 1374 aa13.16□□□□□ -0.3
SNRPA1-208ENST00000559686 WDR17Q8IZU2 1322 aa13.15□□□□□ -0.3
SNRPA1-208ENST00000559686 NHSQ6T4R5 1651 aa13.15□□□□□ -0.3
SNRPA1-208ENST00000559686 EXOC5O00471 708 aa13.15□□□□□ -0.3
SNRPA1-208ENST00000559686 SRPK2P78362 688 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-208ENST00000559686 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
SNRPA1-208ENST00000559686 PAPPAQ13219 1627 aa13.14□□□□□ -0.31
SNRPA1-208ENST00000559686 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
SNRPA1-208ENST00000559686 SLIT3O75094 1523 aa13.13□□□□□ -0.31
SNRPA1-208ENST00000559686 BTAF1O14981 1849 aa13.13□□□□□ -0.31
SNRPA1-208ENST00000559686 ZNF526Q8TF50 670 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-208ENST00000559686 CABP2Q9NPB3 220 aa13.13□□□□□ -0.31
SNRPA1-208ENST00000559686 PIK3C2AO00443 1686 aa13.12□□□□□ -0.31
SNRPA1-208ENST00000559686 POLD1P28340 1107 aa13.12□□□□□ -0.31
SNRPA1-208ENST00000559686 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-208ENST00000559686 BCL9O00512 1426 aa13.12□□□□□ -0.31
SNRPA1-208ENST00000559686 YBX3P16989 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNRPA1-208ENST00000559686 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
SNRPA1-208ENST00000559686 LRRC4BQ9NT99 713 aa13.1□□□□□ -0.31
SNRPA1-208ENST00000559686 TUBGCP6Q96RT7 1819 aa13.1□□□□□ -0.31
SNRPA1-208ENST00000559686 CPSF1Q10570 1443 aaKnown RBP13.1□□□□□ -0.31
SNRPA1-208ENST00000559686 TNS2Q63HR2 1409 aa13.1□□□□□ -0.31
SNRPA1-208ENST00000559686 ATP10DQ9P241 1426 aa13.1□□□□□ -0.31
SNRPA1-208ENST00000559686 BRD4O60885 1362 aaPredicted RBP13.09□□□□□ -0.31
SNRPA1-208ENST00000559686 USP6P35125 1406 aa13.09□□□□□ -0.31
SNRPA1-208ENST00000559686 KCNQ4P56696 695 aa13.09□□□□□ -0.31
SNRPA1-208ENST00000559686 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
SNRPA1-208ENST00000559686 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
SNRPA1-208ENST00000559686 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
SNRPA1-208ENST00000559686 GPBP1L1Q9HC44 474 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-208ENST00000559686 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 QSER1Q2KHR3 1735 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 HSPA6P17066 643 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 CHRDL2Q6WN34 429 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 PNPLA7Q6ZV29 1317 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 CCDC7Q96M83 1385 aa13.06□□□□□ -0.32
SNRPA1-208ENST00000559686 ABCC6O95255 1503 aa13.05□□□□□ -0.32
SNRPA1-208ENST00000559686 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
SNRPA1-208ENST00000559686 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
SNRPA1-208ENST00000559686 COL24A1Q17RW2 1714 aa13.05□□□□□ -0.32
SNRPA1-208ENST00000559686 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
SNRPA1-208ENST00000559686 SLC16A10Q8TF71 515 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms