RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 LARP1Q6PKG0 1096 aaKnown RBP26.91■■□□□ 1.9
SHF-205ENST00000559566 SPATA31A5Q5VU36 1347 aa26.9■■□□□ 1.9
SHF-205ENST00000559566 SPATA31A7Q8IWB4 1347 aa26.9■■□□□ 1.9
SHF-205ENST00000559566 CGNL1Q0VF96 1302 aa26.89■■□□□ 1.89
SHF-205ENST00000559566 EVA1CP58658 441 aa26.87■■□□□ 1.89
SHF-205ENST00000559566 MAP3K19Q56UN5 1328 aa26.87■■□□□ 1.89
SHF-205ENST00000559566 SPATA31A1Q5TZJ5 1347 aa26.87■■□□□ 1.89
SHF-205ENST00000559566 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
SHF-205ENST00000559566 RRS1Q15050 365 aaKnown RBP26.86■■□□□ 1.89
SHF-205ENST00000559566 LTN1O94822 1766 aa26.84■■□□□ 1.89
SHF-205ENST00000559566 ABCC6O95255 1503 aa26.84■■□□□ 1.89
SHF-205ENST00000559566 PER1O15534 1290 aaPredicted RBP26.83■■□□□ 1.89
SHF-205ENST00000559566 FAM98CQ17RN3 349 aaKnown RBP26.83■■□□□ 1.89
SHF-205ENST00000559566 RGPD5Q99666 1765 aa26.83■■□□□ 1.89
SHF-205ENST00000559566 SOCS7O14512 581 aa26.82■■□□□ 1.88
SHF-205ENST00000559566 ONECUT3O60422 494 aaPredicted RBP26.82■■□□□ 1.88
SHF-205ENST00000559566 USP35Q9P2H5 1018 aa26.82■■□□□ 1.88
SHF-205ENST00000559566 AMER1Q5JTC6 1135 aaPredicted RBP26.81■■□□□ 1.88
SHF-205ENST00000559566 SEPT12Q8IYM1 358 aa26.8■■□□□ 1.88
SHF-205ENST00000559566 IP6K1Q92551 441 aa26.8■■□□□ 1.88
SHF-205ENST00000559566 WDR17Q8IZU2 1322 aa26.8■■□□□ 1.88
SHF-205ENST00000559566 CRB1P82279 1406 aa26.8■■□□□ 1.88
SHF-205ENST00000559566 HOXC9P31274 260 aa26.79■■□□□ 1.88
SHF-205ENST00000559566 KNSTRNQ9Y448 316 aa26.79■■□□□ 1.88
SHF-205ENST00000559566 ERBB3P21860 1342 aa26.78■■□□□ 1.88
SHF-205ENST00000559566 PEAK1Q9H792 1746 aa26.78■■□□□ 1.88
SHF-205ENST00000559566 EMILIN1Q9Y6C2 1016 aa26.77■■□□□ 1.88
SHF-205ENST00000559566 ANKRD26Q9UPS8 1709 aa26.76■■□□□ 1.88
SHF-205ENST00000559566 THSD7AQ9UPZ6 1657 aa26.76■■□□□ 1.87
SHF-205ENST00000559566 NSD2O96028 1365 aa26.76■■□□□ 1.87
SHF-205ENST00000559566 TNNT2P45379 298 aaPredicted RBP26.76■■□□□ 1.87
SHF-205ENST00000559566 TOM1L2Q6ZVM7 507 aa26.76■■□□□ 1.87
SHF-205ENST00000559566 ANKRD24Q8TF21 1146 aa26.76■■□□□ 1.87
SHF-205ENST00000559566 BLMP54132 1417 aaPredicted RBP26.75■■□□□ 1.87
SHF-205ENST00000559566 CSB-PGBD3P0DP91 1061 aa26.75■■□□□ 1.87
SHF-205ENST00000559566 AMPHP49418 695 aa26.75■■□□□ 1.87
SHF-205ENST00000559566 TCP11L2Q8N4U5 519 aa26.75■■□□□ 1.87
SHF-205ENST00000559566 RTL1A6NKG5 1358 aa26.73■■□□□ 1.87
SHF-205ENST00000559566 BARGINQ6ZT62 677 aa26.73■■□□□ 1.87
SHF-205ENST00000559566 LTV1Q96GA3 475 aaPredicted RBP26.73■■□□□ 1.87
SHF-205ENST00000559566 A0A0G2JS52 829 aa26.72■■□□□ 1.87
SHF-205ENST00000559566 MYT1Q01538 1121 aa26.72■■□□□ 1.87
SHF-205ENST00000559566 POLKQ9UBT6 870 aa26.72■■□□□ 1.87
SHF-205ENST00000559566 HSP90AB2PQ58FF8 381 aa26.71■■□□□ 1.87
SHF-205ENST00000559566 CARD10Q9BWT7 1032 aa26.71■■□□□ 1.87
SHF-205ENST00000559566 BRWD3Q6RI45 1802 aa26.71■■□□□ 1.87
SHF-205ENST00000559566 MORC1Q86VD1 984 aa26.7■■□□□ 1.86
SHF-205ENST00000559566 CC2D1BQ5T0F9 858 aaKnown RBP26.69■■□□□ 1.86
SHF-205ENST00000559566 THRAP3Q9Y2W1 955 aaKnown RBP26.69■■□□□ 1.86
SHF-205ENST00000559566 FLT4P35916 1363 aa26.69■■□□□ 1.86
SHF-205ENST00000559566 NLRP2Q9NX02 1062 aa26.68■■□□□ 1.86
SHF-205ENST00000559566 DISP2A7MBM2 1401 aa26.67■■□□□ 1.86
SHF-205ENST00000559566 CNGB1Q14028 1251 aaPredicted RBP26.67■■□□□ 1.86
SHF-205ENST00000559566 INSRP06213 1382 aa26.67■■□□□ 1.86
SHF-205ENST00000559566 PPM1GO15355 546 aaPredicted RBP26.66■■□□□ 1.86
SHF-205ENST00000559566 KIF24Q5T7B8 1368 aa26.66■■□□□ 1.86
SHF-205ENST00000559566 FAM182BQ5T319 152 aa26.65■■□□□ 1.86
SHF-205ENST00000559566 KRT27Q7Z3Y8 459 aa26.65■■□□□ 1.86
SHF-205ENST00000559566 NPC1L1Q9UHC9 1359 aa26.64■■□□□ 1.86
SHF-205ENST00000559566 UPF1Q92900 1129 aaKnown RBP eCLIP26.64■■□□□ 1.86
SHF-205ENST00000559566 SMG6Q86US8 1419 aaKnown RBP26.64■■□□□ 1.85
SHF-205ENST00000559566 WNK3Q9BYP7 1800 aa26.62■■□□□ 1.85
SHF-205ENST00000559566 MAP2P11137 1827 aaKnown RBP26.61■■□□□ 1.85
SHF-205ENST00000559566 NBPF6Q5VWK0 638 aa26.61■■□□□ 1.85
SHF-205ENST00000559566 NBPF4Q96M43 638 aa26.61■■□□□ 1.85
SHF-205ENST00000559566 LRRC37A3O60309 1634 aa26.61■■□□□ 1.85
SHF-205ENST00000559566 FAM208AQ9UK61 1670 aaKnown RBP26.6■■□□□ 1.85
SHF-205ENST00000559566 PARP4Q9UKK3 1724 aaKnown RBP26.6■■□□□ 1.85
SHF-205ENST00000559566 RGPD2P0DJD1 1756 aa26.6■■□□□ 1.85
SHF-205ENST00000559566 USHBP1Q8N6Y0 703 aa26.59■■□□□ 1.85
SHF-205ENST00000559566 DDX10Q13206 875 aaKnown RBP26.57■■□□□ 1.84
SHF-205ENST00000559566 EP400Q96L91 3159 aa26.56■■□□□ 1.84
SHF-205ENST00000559566 EIF4A2Q14240 407 aaKnown RBP26.55■■□□□ 1.84
SHF-205ENST00000559566 IL2RBP14784 551 aa26.54■■□□□ 1.84
SHF-205ENST00000559566 DDB1Q16531 1140 aa26.54■■□□□ 1.84
SHF-205ENST00000559566 PDE3BQ13370 1112 aa26.53■■□□□ 1.84
SHF-205ENST00000559566 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
SHF-205ENST00000559566 MEGF6O75095 1541 aa26.53■■□□□ 1.84
SHF-205ENST00000559566 MTHFSP49914 203 aa26.52■■□□□ 1.84
SHF-205ENST00000559566 NCAPD2Q15021 1401 aa26.51■■□□□ 1.83
SHF-205ENST00000559566 TNS2Q63HR2 1409 aa26.51■■□□□ 1.83
SHF-205ENST00000559566 MARCH10Q8NA82 808 aaPredicted RBP26.51■■□□□ 1.83
SHF-205ENST00000559566 EYA1Q99502 592 aa26.51■■□□□ 1.83
SHF-205ENST00000559566 EXOC5O00471 708 aa26.47■■□□□ 1.83
SHF-205ENST00000559566 IL13P35225 146 aa26.45■■□□□ 1.82
SHF-205ENST00000559566 OVOS2A0A0G2JMS6 1433 aa26.45■■□□□ 1.82
SHF-205ENST00000559566 IGSF1Q8N6C5 1336 aa26.44■■□□□ 1.82
SHF-205ENST00000559566 FAM196AQ6ZSG2 479 aa26.44■■□□□ 1.82
SHF-205ENST00000559566 COL3A1P02461 1466 aaPredicted RBP26.43■■□□□ 1.82
SHF-205ENST00000559566 ZNF316A6NFI3 1004 aaPredicted RBP26.43■■□□□ 1.82
SHF-205ENST00000559566 PPP2R1AP30153 589 aa26.43■■□□□ 1.82
SHF-205ENST00000559566 PARD3Q8TEW0 1356 aa26.42■■□□□ 1.82
SHF-205ENST00000559566 TRIM37O94972 964 aa26.41■■□□□ 1.82
SHF-205ENST00000559566 SHANK3Q9BYB0 1731 aa26.4■■□□□ 1.82
SHF-205ENST00000559566 PTF1AQ7RTS3 328 aa26.4■■□□□ 1.82
SHF-205ENST00000559566 AEBP1Q8IUX7 1158 aa26.4■■□□□ 1.82
SHF-205ENST00000559566 RAPGEF4Q8WZA2 1011 aa26.4■■□□□ 1.82
SHF-205ENST00000559566 TATP17735 454 aaPredicted RBP26.39■■□□□ 1.82
SHF-205ENST00000559566 RGPD1P0DJD0 1748 aa26.39■■□□□ 1.81
SHF-205ENST00000559566 DEFB132Q7Z7B7 95 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms