RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZRANB1Q9UGI0 708 aa17.62■□□□□ 0.41
LRRC28-214ENST00000559433 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
LRRC28-214ENST00000559433 MYOM1P52179 1685 aa17.61■□□□□ 0.41
LRRC28-214ENST00000559433 CDCA8Q53HL2 280 aa17.6■□□□□ 0.41
LRRC28-214ENST00000559433 ANKRD36BQ8N2N9 1353 aa17.6■□□□□ 0.41
LRRC28-214ENST00000559433 WNK3Q9BYP7 1800 aa17.59■□□□□ 0.41
LRRC28-214ENST00000559433 ABCC6O95255 1503 aa17.59■□□□□ 0.41
LRRC28-214ENST00000559433 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
LRRC28-214ENST00000559433 CRB1P82279 1406 aa17.59■□□□□ 0.41
LRRC28-214ENST00000559433 ARHGEF25Q86VW2 580 aa17.59■□□□□ 0.41
LRRC28-214ENST00000559433 OVOS2A0A0J9YW53 1432 aa17.58■□□□□ 0.41
LRRC28-214ENST00000559433 OVOS2Q6IE36 1432 aa17.58■□□□□ 0.41
LRRC28-214ENST00000559433 TCP11L2Q8N4U5 519 aa17.58■□□□□ 0.4
LRRC28-214ENST00000559433 KIF20BQ96Q89 1820 aa17.58■□□□□ 0.4
LRRC28-214ENST00000559433 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.4
LRRC28-214ENST00000559433 BARGINQ6ZT62 677 aa17.57■□□□□ 0.4
LRRC28-214ENST00000559433 AXIN2Q9Y2T1 843 aa17.57■□□□□ 0.4
LRRC28-214ENST00000559433 RGPD1P0DJD0 1748 aa17.56■□□□□ 0.4
LRRC28-214ENST00000559433 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
LRRC28-214ENST00000559433 TOM1L2Q6ZVM7 507 aa17.55■□□□□ 0.4
LRRC28-214ENST00000559433 THRAP3Q9Y2W1 955 aaKnown RBP17.55■□□□□ 0.4
LRRC28-214ENST00000559433 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
LRRC28-214ENST00000559433 FAM182BQ5T319 152 aa17.54■□□□□ 0.4
LRRC28-214ENST00000559433 CSB-PGBD3P0DP91 1061 aa17.53■□□□□ 0.4
LRRC28-214ENST00000559433 EIF4G2P78344 907 aaKnown RBP eCLIP17.53■□□□□ 0.4
LRRC28-214ENST00000559433 LRRC37A3O60309 1634 aa17.53■□□□□ 0.4
LRRC28-214ENST00000559433 TNS1Q9HBL0 1735 aaKnown RBP17.52■□□□□ 0.4
LRRC28-214ENST00000559433 COG3Q96JB2 828 aa17.52■□□□□ 0.4
LRRC28-214ENST00000559433 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
LRRC28-214ENST00000559433 BAG6P46379 1132 aa17.51■□□□□ 0.39
LRRC28-214ENST00000559433 FAM196AQ6ZSG2 479 aa17.51■□□□□ 0.39
LRRC28-214ENST00000559433 DEFB132Q7Z7B7 95 aa17.49■□□□□ 0.39
LRRC28-214ENST00000559433 POLR3GLQ9BT43 218 aa17.49■□□□□ 0.39
LRRC28-214ENST00000559433 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
LRRC28-214ENST00000559433 CARD10Q9BWT7 1032 aa17.48■□□□□ 0.39
LRRC28-214ENST00000559433 NSD3Q9BZ95 1437 aa17.47■□□□□ 0.39
LRRC28-214ENST00000559433 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
LRRC28-214ENST00000559433 ERBB3P21860 1342 aa17.47■□□□□ 0.39
LRRC28-214ENST00000559433 CCDC7Q96M83 1385 aa17.46■□□□□ 0.39
LRRC28-214ENST00000559433 FYB1O15117 783 aa17.46■□□□□ 0.39
LRRC28-214ENST00000559433 PEAK1Q9H792 1746 aa17.46■□□□□ 0.39
LRRC28-214ENST00000559433 DDB1Q16531 1140 aa17.45■□□□□ 0.38
LRRC28-214ENST00000559433 ANKRD24Q8TF21 1146 aa17.45■□□□□ 0.38
LRRC28-214ENST00000559433 CDCA7Q9BWT1 371 aaPredicted RBP17.45■□□□□ 0.38
LRRC28-214ENST00000559433 CARD14Q9BXL6 1004 aa17.45■□□□□ 0.38
LRRC28-214ENST00000559433 NLRP2Q9NX02 1062 aa17.45■□□□□ 0.38
LRRC28-214ENST00000559433 DISP2A7MBM2 1401 aa17.45■□□□□ 0.38
LRRC28-214ENST00000559433 C11orf95C9JLR9 678 aaPredicted RBP17.44■□□□□ 0.38
LRRC28-214ENST00000559433 TRIM37O94972 964 aa17.44■□□□□ 0.38
LRRC28-214ENST00000559433 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
LRRC28-214ENST00000559433 IP6K1Q92551 441 aa17.44■□□□□ 0.38
LRRC28-214ENST00000559433 SBF2Q86WG5 1849 aa17.44■□□□□ 0.38
LRRC28-214ENST00000559433 MAP3K19Q56UN5 1328 aa17.44■□□□□ 0.38
LRRC28-214ENST00000559433 FBLN1P23142 703 aa17.43■□□□□ 0.38
LRRC28-214ENST00000559433 OVOS2A0A0G2JMS6 1433 aa17.43■□□□□ 0.38
LRRC28-214ENST00000559433 RGPD2P0DJD1 1756 aa17.43■□□□□ 0.38
LRRC28-214ENST00000559433 ANKRD26Q9UPS8 1709 aa17.42■□□□□ 0.38
LRRC28-214ENST00000559433 APBA3O96018 575 aa17.42■□□□□ 0.38
LRRC28-214ENST00000559433 AMPHP49418 695 aa17.42■□□□□ 0.38
LRRC28-214ENST00000559433 EN1Q05925 392 aaPredicted RBP17.42■□□□□ 0.38
LRRC28-214ENST00000559433 LTV1Q96GA3 475 aaPredicted RBP17.42■□□□□ 0.38
LRRC28-214ENST00000559433 RTL1A6NKG5 1358 aa17.41■□□□□ 0.38
LRRC28-214ENST00000559433 HOXC9P31274 260 aa17.41■□□□□ 0.38
LRRC28-214ENST00000559433 RRS1Q15050 365 aaKnown RBP17.41■□□□□ 0.38
LRRC28-214ENST00000559433 TNS2Q63HR2 1409 aa17.4■□□□□ 0.38
LRRC28-214ENST00000559433 EXOC5O00471 708 aa17.4■□□□□ 0.38
LRRC28-214ENST00000559433 CGNL1Q0VF96 1302 aa17.4■□□□□ 0.38
LRRC28-214ENST00000559433 MAP2P11137 1827 aaKnown RBP17.37■□□□□ 0.37
LRRC28-214ENST00000559433 RREB1Q92766 1687 aa17.37■□□□□ 0.37
LRRC28-214ENST00000559433 IL2RBP14784 551 aa17.37■□□□□ 0.37
LRRC28-214ENST00000559433 MARCH10Q8NA82 808 aaPredicted RBP17.37■□□□□ 0.37
LRRC28-214ENST00000559433 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
LRRC28-214ENST00000559433 PANK3Q9H999 370 aa17.35■□□□□ 0.37
LRRC28-214ENST00000559433 FLT4P35916 1363 aa17.35■□□□□ 0.37
LRRC28-214ENST00000559433 NUP188Q5SRE5 1749 aa17.35■□□□□ 0.37
LRRC28-214ENST00000559433 RGPD3A6NKT7 1758 aaPredicted RBP17.35■□□□□ 0.37
LRRC28-214ENST00000559433 RGPD4Q7Z3J3 1758 aa17.35■□□□□ 0.37
LRRC28-214ENST00000559433 SRCAPQ6ZRS2 3230 aa17.34■□□□□ 0.37
LRRC28-214ENST00000559433 BCL9O00512 1426 aa17.34■□□□□ 0.37
LRRC28-214ENST00000559433 EZH2Q15910 746 aaKnown RBP17.34■□□□□ 0.37
LRRC28-214ENST00000559433 KIF24Q5T7B8 1368 aa17.34■□□□□ 0.37
LRRC28-214ENST00000559433 PARD3Q8TEW0 1356 aa17.34■□□□□ 0.37
LRRC28-214ENST00000559433 INSRP06213 1382 aa17.33■□□□□ 0.36
LRRC28-214ENST00000559433 CAMKK2Q96RR4 588 aa17.33■□□□□ 0.36
LRRC28-214ENST00000559433 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
LRRC28-214ENST00000559433 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
LRRC28-214ENST00000559433 EMILIN1Q9Y6C2 1016 aa17.32■□□□□ 0.36
LRRC28-214ENST00000559433 KIF7Q2M1P5 1343 aa17.31■□□□□ 0.36
LRRC28-214ENST00000559433 SHANK3Q9BYB0 1731 aa17.31■□□□□ 0.36
LRRC28-214ENST00000559433 PSDA5PKW4 1024 aaPredicted RBP17.31■□□□□ 0.36
LRRC28-214ENST00000559433 HSP90AB2PQ58FF8 381 aa17.31■□□□□ 0.36
LRRC28-214ENST00000559433 KAT6BQ8WYB5 2073 aa17.31■□□□□ 0.36
LRRC28-214ENST00000559433 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
LRRC28-214ENST00000559433 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
LRRC28-214ENST00000559433 NSD2O96028 1365 aa17.29■□□□□ 0.36
LRRC28-214ENST00000559433 TNNT2P45379 298 aaPredicted RBP17.29■□□□□ 0.36
LRRC28-214ENST00000559433 NBPF6Q5VWK0 638 aa17.29■□□□□ 0.36
LRRC28-214ENST00000559433 USHBP1Q8N6Y0 703 aa17.29■□□□□ 0.36
LRRC28-214ENST00000559433 NBPF4Q96M43 638 aa17.29■□□□□ 0.36
LRRC28-214ENST00000559433 MEGF6O75095 1541 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms