RNA–Protein interactions for RNA: ENST00000559179.1

TRPM1-210, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPM1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-210ENST00000559179 EXOC5O00471 708 aa17.63■□□□□ 0.41
TRPM1-210ENST00000559179 PLSCR1O15162 318 aa17.63■□□□□ 0.41
TRPM1-210ENST00000559179 AXIN2Q9Y2T1 843 aa17.63■□□□□ 0.41
TRPM1-210ENST00000559179 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
TRPM1-210ENST00000559179 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
TRPM1-210ENST00000559179 TTC21BQ7Z4L5 1316 aa17.62■□□□□ 0.41
TRPM1-210ENST00000559179 SLIT3O75094 1523 aa17.62■□□□□ 0.41
TRPM1-210ENST00000559179 MARCH10Q8NA82 808 aaPredicted RBP17.61■□□□□ 0.41
TRPM1-210ENST00000559179 LRRC37A3O60309 1634 aa17.61■□□□□ 0.41
TRPM1-210ENST00000559179 ARHGEF25Q86VW2 580 aa17.6■□□□□ 0.41
TRPM1-210ENST00000559179 STK32BQ9NY57 414 aa17.6■□□□□ 0.41
TRPM1-210ENST00000559179 TTC21AQ8NDW8 1320 aa17.6■□□□□ 0.41
TRPM1-210ENST00000559179 KTN1Q86UP2 1357 aaKnown RBP17.6■□□□□ 0.41
TRPM1-210ENST00000559179 CPSF1Q10570 1443 aaKnown RBP17.6■□□□□ 0.41
TRPM1-210ENST00000559179 SBF2Q86WG5 1849 aa17.59■□□□□ 0.41
TRPM1-210ENST00000559179 PIK3C2AO00443 1686 aa17.59■□□□□ 0.41
TRPM1-210ENST00000559179 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
TRPM1-210ENST00000559179 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
TRPM1-210ENST00000559179 CARD10Q9BWT7 1032 aa17.59■□□□□ 0.41
TRPM1-210ENST00000559179 AKAP12Q02952 1782 aa17.58■□□□□ 0.41
TRPM1-210ENST00000559179 RGPD5Q99666 1765 aa17.58■□□□□ 0.41
TRPM1-210ENST00000559179 TRPM1Q7Z4N2 1603 aa17.58■□□□□ 0.41
TRPM1-210ENST00000559179 ZBTB7AO95365 584 aa17.58■□□□□ 0.4
TRPM1-210ENST00000559179 TMC1Q8TDI8 760 aa17.58■□□□□ 0.4
TRPM1-210ENST00000559179 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
TRPM1-210ENST00000559179 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
TRPM1-210ENST00000559179 PEAK1Q9H792 1746 aa17.57■□□□□ 0.4
TRPM1-210ENST00000559179 COL18A1P39060 1754 aa17.56■□□□□ 0.4
TRPM1-210ENST00000559179 NINLQ9Y2I6 1382 aa17.56■□□□□ 0.4
TRPM1-210ENST00000559179 TXNRD1Q16881 649 aa17.56■□□□□ 0.4
TRPM1-210ENST00000559179 NLRP2Q9NX02 1062 aa17.56■□□□□ 0.4
TRPM1-210ENST00000559179 WNK3Q9BYP7 1800 aa17.55■□□□□ 0.4
TRPM1-210ENST00000559179 CCDC7Q96M83 1385 aa17.54■□□□□ 0.4
TRPM1-210ENST00000559179 RGPD3A6NKT7 1758 aaPredicted RBP17.54■□□□□ 0.4
TRPM1-210ENST00000559179 RGPD4Q7Z3J3 1758 aa17.54■□□□□ 0.4
TRPM1-210ENST00000559179 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
TRPM1-210ENST00000559179 HDGFL2Q7Z4V5 671 aaPredicted RBP17.53■□□□□ 0.4
TRPM1-210ENST00000559179 PROM2Q8N271 834 aa17.53■□□□□ 0.4
TRPM1-210ENST00000559179 PDGFDQ9GZP0 370 aaPredicted RBP17.53■□□□□ 0.4
TRPM1-210ENST00000559179 SLC15A2Q16348 729 aa17.52■□□□□ 0.4
TRPM1-210ENST00000559179 NME9Q86XW9 330 aa17.51■□□□□ 0.39
TRPM1-210ENST00000559179 CARD11Q9BXL7 1154 aa17.51■□□□□ 0.39
TRPM1-210ENST00000559179 IL2RBP14784 551 aa17.5■□□□□ 0.39
TRPM1-210ENST00000559179 BCL9O00512 1426 aa17.48■□□□□ 0.39
TRPM1-210ENST00000559179 KAT6BQ8WYB5 2073 aa17.48■□□□□ 0.39
TRPM1-210ENST00000559179 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
TRPM1-210ENST00000559179 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
TRPM1-210ENST00000559179 TERF2IPQ9NYB0 399 aa17.47■□□□□ 0.39
TRPM1-210ENST00000559179 CASZ1Q86V15 1759 aa17.47■□□□□ 0.39
TRPM1-210ENST00000559179 NFAT5O94916 1531 aa17.47■□□□□ 0.39
TRPM1-210ENST00000559179 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
TRPM1-210ENST00000559179 FHDC1Q9C0D6 1143 aaPredicted RBP17.46■□□□□ 0.39
TRPM1-210ENST00000559179 MTFR1LQ9H019 292 aa17.46■□□□□ 0.39
TRPM1-210ENST00000559179 SLC12A5Q9H2X9 1139 aa17.46■□□□□ 0.39
TRPM1-210ENST00000559179 ERBB3P21860 1342 aa17.46■□□□□ 0.38
TRPM1-210ENST00000559179 MON2Q7Z3U7 1717 aa17.45■□□□□ 0.38
TRPM1-210ENST00000559179 KLHL34Q8N239 644 aa17.45■□□□□ 0.38
TRPM1-210ENST00000559179 DDX54Q8TDD1 881 aaKnown RBP17.45■□□□□ 0.38
TRPM1-210ENST00000559179 USP31Q70CQ4 1352 aa17.44■□□□□ 0.38
TRPM1-210ENST00000559179 LTN1O94822 1766 aa17.44■□□□□ 0.38
TRPM1-210ENST00000559179 PTGER2P43116 358 aa17.44■□□□□ 0.38
TRPM1-210ENST00000559179 SYT17Q9BSW7 474 aa17.44■□□□□ 0.38
TRPM1-210ENST00000559179 MYOM1P52179 1685 aa17.44■□□□□ 0.38
TRPM1-210ENST00000559179 ABCC6O95255 1503 aa17.43■□□□□ 0.38
TRPM1-210ENST00000559179 SYTL4Q96C24 671 aaPredicted RBP17.43■□□□□ 0.38
TRPM1-210ENST00000559179 ARXQ96QS3 562 aa17.42■□□□□ 0.38
TRPM1-210ENST00000559179 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
TRPM1-210ENST00000559179 TONSLQ96HA7 1378 aa17.4■□□□□ 0.38
TRPM1-210ENST00000559179 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
TRPM1-210ENST00000559179 AMPHP49418 695 aa17.4■□□□□ 0.38
TRPM1-210ENST00000559179 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.38
TRPM1-210ENST00000559179 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
TRPM1-210ENST00000559179 COG3Q96JB2 828 aa17.39■□□□□ 0.37
TRPM1-210ENST00000559179 POLD1P28340 1107 aa17.38■□□□□ 0.37
TRPM1-210ENST00000559179 GPR162Q16538 588 aa17.38■□□□□ 0.37
TRPM1-210ENST00000559179 IP6K1Q92551 441 aa17.38■□□□□ 0.37
TRPM1-210ENST00000559179 BTAF1O14981 1849 aa17.37■□□□□ 0.37
TRPM1-210ENST00000559179 A0A1W2PP64 1363 aa17.37■□□□□ 0.37
TRPM1-210ENST00000559179 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
TRPM1-210ENST00000559179 MSH5O43196 834 aa17.36■□□□□ 0.37
TRPM1-210ENST00000559179 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
TRPM1-210ENST00000559179 ZNF784Q8NCA9 323 aaPredicted RBP17.36■□□□□ 0.37
TRPM1-210ENST00000559179 TFCP2L1Q9NZI6 479 aa17.36■□□□□ 0.37
TRPM1-210ENST00000559179 SLC27A3Q5K4L6 730 aa17.35■□□□□ 0.37
TRPM1-210ENST00000559179 LRRC4BQ9NT99 713 aa17.35■□□□□ 0.37
TRPM1-210ENST00000559179 PRIM1P49642 420 aaKnown RBP17.34■□□□□ 0.37
TRPM1-210ENST00000559179 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
TRPM1-210ENST00000559179 KCNQ4P56696 695 aa17.33■□□□□ 0.36
TRPM1-210ENST00000559179 SLC16A10Q8TF71 515 aa17.33■□□□□ 0.36
TRPM1-210ENST00000559179 PUS7Q96PZ0 661 aaKnown RBP17.33■□□□□ 0.36
TRPM1-210ENST00000559179 SGIP1Q9BQI5 828 aa17.33■□□□□ 0.36
TRPM1-210ENST00000559179 SLC24A1O60721 1099 aa17.32■□□□□ 0.36
TRPM1-210ENST00000559179 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
TRPM1-210ENST00000559179 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
TRPM1-210ENST00000559179 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
TRPM1-210ENST00000559179 FBLN1P23142 703 aa17.31■□□□□ 0.36
TRPM1-210ENST00000559179 HOXC9P31274 260 aa17.31■□□□□ 0.36
TRPM1-210ENST00000559179 AKT1S1Q96B36 256 aa17.3■□□□□ 0.36
TRPM1-210ENST00000559179 FAM208AQ9UK61 1670 aaKnown RBP17.29■□□□□ 0.36
TRPM1-210ENST00000559179 CHD4Q14839 1912 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms