RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 BRD1O95696 1058 aa19.73■□□□□ 0.75
CASC4-208ENST00000559151 STK32AQ8WU08 396 aa19.73■□□□□ 0.75
CASC4-208ENST00000559151 TRAF7Q6Q0C0 670 aa19.72■□□□□ 0.75
CASC4-208ENST00000559151 NOVA2Q9UNW9 492 aaKnown RBP19.72■□□□□ 0.75
CASC4-208ENST00000559151 GIGYF1O75420 1035 aaPredicted RBP19.71■□□□□ 0.75
CASC4-208ENST00000559151 SH3BP2P78314 561 aa19.71■□□□□ 0.75
CASC4-208ENST00000559151 KCNC4Q03721 635 aa19.71■□□□□ 0.75
CASC4-208ENST00000559151 CRTC2Q53ET0 693 aaPredicted RBP19.71■□□□□ 0.75
CASC4-208ENST00000559151 USP17L15C9J2P7 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L10C9JJH3 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L13C9JLJ4 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L12C9JPN9 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L11C9JVI0 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L21D6R901 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L18D6R9N7 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L22D6RA61 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L17D6RBQ6 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L19D6RCP7 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L20D6RJB6 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 USP17L24Q0WX57 530 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 MAP7D1Q3KQU3 841 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 TMEM164Q5U3C3 297 aa19.7■□□□□ 0.74
CASC4-208ENST00000559151 CCDC85AQ96PX6 553 aaPredicted RBP19.7■□□□□ 0.74
CASC4-208ENST00000559151 FAM196BA6NMK8 535 aa19.69■□□□□ 0.74
CASC4-208ENST00000559151 EML3Q32P44 896 aa19.69■□□□□ 0.74
CASC4-208ENST00000559151 SLC10A4Q96EP9 437 aa19.69■□□□□ 0.74
CASC4-208ENST00000559151 LZTS3O60299 673 aaPredicted RBP19.68■□□□□ 0.74
CASC4-208ENST00000559151 ITGBL1O95965 494 aaPredicted RBP19.68■□□□□ 0.74
CASC4-208ENST00000559151 C1QTNF2Q9BXJ5 285 aa19.68■□□□□ 0.74
CASC4-208ENST00000559151 HCSTQ9UBK5 93 aa19.68■□□□□ 0.74
CASC4-208ENST00000559151 RNF223E7ERA6 249 aa19.67■□□□□ 0.74
CASC4-208ENST00000559151 ATP5J2-PTCD1G3V325 749 aa19.67■□□□□ 0.74
CASC4-208ENST00000559151 RASA1P20936 1047 aa19.67■□□□□ 0.74
CASC4-208ENST00000559151 KCNA1Q09470 495 aa19.66■□□□□ 0.74
CASC4-208ENST00000559151 LARP1Q6PKG0 1096 aaKnown RBP19.66■□□□□ 0.74
CASC4-208ENST00000559151 DOLKQ9UPQ8 538 aa19.66■□□□□ 0.74
CASC4-208ENST00000559151 CCDC9Q9Y3X0 531 aaKnown RBP19.66■□□□□ 0.74
CASC4-208ENST00000559151 PTK7Q13308 1070 aa19.65■□□□□ 0.74
CASC4-208ENST00000559151 PLA2G2CQ5R387 149 aa19.65■□□□□ 0.74
CASC4-208ENST00000559151 GZF1Q9H116 711 aaPredicted RBP19.65■□□□□ 0.74
CASC4-208ENST00000559151 RNF166Q96A37 237 aaPredicted RBP19.64■□□□□ 0.73
CASC4-208ENST00000559151 ZBTB24O43167 697 aaPredicted RBP19.63■□□□□ 0.73
CASC4-208ENST00000559151 OXLD1Q5BKU9 147 aa19.62■□□□□ 0.73
CASC4-208ENST00000559151 PATL2C9JE40 543 aaKnown RBP19.61■□□□□ 0.73
CASC4-208ENST00000559151 TRIM32Q13049 653 aa19.61■□□□□ 0.73
CASC4-208ENST00000559151 TRMT44Q8IYL2 757 aaKnown RBP19.6■□□□□ 0.73
CASC4-208ENST00000559151 OGFOD1Q8N543 542 aa19.6■□□□□ 0.73
CASC4-208ENST00000559151 ANKLE1Q8NAG6 615 aa19.6■□□□□ 0.73
CASC4-208ENST00000559151 NOD1Q9Y239 953 aa19.6■□□□□ 0.73
CASC4-208ENST00000559151 NBPF20Q3BBV1 942 aa19.59■□□□□ 0.73
CASC4-208ENST00000559151 CLDN10P78369 228 aa19.58■□□□□ 0.72
CASC4-208ENST00000559151 RNF20Q5VTR2 975 aa19.58■□□□□ 0.72
CASC4-208ENST00000559151 CDCA7Q9BWT1 371 aaPredicted RBP19.58■□□□□ 0.72
CASC4-208ENST00000559151 ESPNB1AK53 854 aa19.57■□□□□ 0.72
CASC4-208ENST00000559151 GGCXP38435 758 aa19.57■□□□□ 0.72
CASC4-208ENST00000559151 SKOR1P84550 965 aa19.57■□□□□ 0.72
CASC4-208ENST00000559151 TRIM50Q86XT4 487 aa19.57■□□□□ 0.72
CASC4-208ENST00000559151 ZNF594Q96JF6 807 aaPredicted RBP19.57■□□□□ 0.72
CASC4-208ENST00000559151 ANKMY2Q8IV38 441 aa19.56■□□□□ 0.72
CASC4-208ENST00000559151 FAM200AQ8TCP9 573 aa19.56■□□□□ 0.72
CASC4-208ENST00000559151 DNAAF2Q9NVR5 837 aaKnown RBP19.55■□□□□ 0.72
CASC4-208ENST00000559151 CDV3Q9UKY7 258 aaKnown RBP19.54■□□□□ 0.72
CASC4-208ENST00000559151 PCDHB11Q9Y5F2 797 aa19.54■□□□□ 0.72
CASC4-208ENST00000559151 ATP1A2P50993 1020 aa19.53■□□□□ 0.72
CASC4-208ENST00000559151 DPYDQ12882 1025 aa19.53■□□□□ 0.72
CASC4-208ENST00000559151 PPP1R18Q6NYC8 613 aa19.53■□□□□ 0.72
CASC4-208ENST00000559151 KIAA1024Q9UPX6 916 aa19.53■□□□□ 0.72
CASC4-208ENST00000559151 IVNS1ABPQ9Y6Y0 642 aa19.53■□□□□ 0.72
CASC4-208ENST00000559151 SPNS2Q8IVW8 549 aa19.52■□□□□ 0.72
CASC4-208ENST00000559151 PCDH10Q9P2E7 1040 aa19.52■□□□□ 0.72
CASC4-208ENST00000559151 RAB15P59190 212 aa19.51■□□□□ 0.71
CASC4-208ENST00000559151 GTF2IP78347 998 aa19.51■□□□□ 0.71
CASC4-208ENST00000559151 TMCO4Q5TGY1 634 aa19.51■□□□□ 0.71
CASC4-208ENST00000559151 SLAIN2Q9P270 581 aa19.51■□□□□ 0.71
CASC4-208ENST00000559151 WNT7BP56706 349 aa19.5■□□□□ 0.71
CASC4-208ENST00000559151 FAM69CQ0P6D2 419 aa19.5■□□□□ 0.71
CASC4-208ENST00000559151 KCTD15Q96SI1 283 aaPredicted RBP19.5■□□□□ 0.71
CASC4-208ENST00000559151 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.5■□□□□ 0.71
CASC4-208ENST00000559151 VARSP26640 1264 aaKnown RBP19.49■□□□□ 0.71
CASC4-208ENST00000559151 B4GALNT3Q6L9W6 998 aa19.49■□□□□ 0.71
CASC4-208ENST00000559151 SEPT12Q8IYM1 358 aa19.49■□□□□ 0.71
CASC4-208ENST00000559151 LARGE2Q8N3Y3 721 aa19.49■□□□□ 0.71
CASC4-208ENST00000559151 ZBTB7BO15156 539 aaPredicted RBP19.48■□□□□ 0.71
CASC4-208ENST00000559151 DKK1O94907 266 aa19.46■□□□□ 0.71
CASC4-208ENST00000559151 RPIAP49247 311 aa19.46■□□□□ 0.71
CASC4-208ENST00000559151 PHLDB3Q6NSJ2 640 aa19.45■□□□□ 0.7
CASC4-208ENST00000559151 VASH1Q7L8A9 365 aaPredicted RBP19.45■□□□□ 0.7
CASC4-208ENST00000559151 SIX5Q8N196 739 aa19.45■□□□□ 0.7
CASC4-208ENST00000559151 CLP1Q92989 425 aaKnown RBP19.45■□□□□ 0.7
CASC4-208ENST00000559151 USP4Q13107 963 aa19.43■□□□□ 0.7
CASC4-208ENST00000559151 INTS6LQ5JSJ4 861 aaKnown RBP19.43■□□□□ 0.7
CASC4-208ENST00000559151 EHBP1Q8NDI1 1231 aa19.43■□□□□ 0.7
CASC4-208ENST00000559151 MAP4K5Q9Y4K4 846 aa19.43■□□□□ 0.7
CASC4-208ENST00000559151 PCDHGA11Q9Y5H2 935 aa19.43■□□□□ 0.7
CASC4-208ENST00000559151 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
CASC4-208ENST00000559151 PSME1Q06323 249 aa19.41■□□□□ 0.7
CASC4-208ENST00000559151 CCDC102BQ68D86 513 aa19.41■□□□□ 0.7
CASC4-208ENST00000559151 CCDC125Q86Z20 511 aa19.41■□□□□ 0.7
CASC4-208ENST00000559151 TPCN2Q8NHX9 752 aa19.41■□□□□ 0.7
CASC4-208ENST00000559151 SSFA2P28290 1259 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms