RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZBTB7CA1YPR0 619 aa14.96□□□□□ -0.01
TPM1-217ENST00000559108 ATRNO75882 1429 aa14.96□□□□□ -0.01
TPM1-217ENST00000559108 CNGB1Q14028 1251 aaPredicted RBP14.96□□□□□ -0.01
TPM1-217ENST00000559108 POTEAQ6S8J7 498 aa14.96□□□□□ -0.01
TPM1-217ENST00000559108 SMG6Q86US8 1419 aaKnown RBP14.96□□□□□ -0.01
TPM1-217ENST00000559108 KCNH5Q8NCM2 988 aa14.96□□□□□ -0.01
TPM1-217ENST00000559108 TNNT2P45379 298 aaPredicted RBP14.95□□□□□ -0.02
TPM1-217ENST00000559108 BTG4Q9NY30 223 aa14.95□□□□□ -0.02
TPM1-217ENST00000559108 EMILIN1Q9Y6C2 1016 aa14.95□□□□□ -0.02
TPM1-217ENST00000559108 FAM208AQ9UK61 1670 aaKnown RBP14.95□□□□□ -0.02
TPM1-217ENST00000559108 USP21Q9UK80 565 aa14.94□□□□□ -0.02
TPM1-217ENST00000559108 POLKQ9UBT6 870 aa14.92□□□□□ -0.02
TPM1-217ENST00000559108 COL3A1P02461 1466 aaPredicted RBP14.91□□□□□ -0.02
TPM1-217ENST00000559108 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
TPM1-217ENST00000559108 HOXC9P31274 260 aa14.91□□□□□ -0.02
TPM1-217ENST00000559108 MORC1Q86VD1 984 aa14.91□□□□□ -0.02
TPM1-217ENST00000559108 UNC5CLQ8IV45 518 aa14.91□□□□□ -0.02
TPM1-217ENST00000559108 BRWD3Q6RI45 1802 aa14.91□□□□□ -0.02
TPM1-217ENST00000559108 RGPD1P0DJD0 1748 aa14.91□□□□□ -0.02
TPM1-217ENST00000559108 THSD7AQ9UPZ6 1657 aa14.9□□□□□ -0.02
TPM1-217ENST00000559108 CDK12Q9NYV4 1490 aaPredicted RBP14.9□□□□□ -0.02
TPM1-217ENST00000559108 RTL1A6NKG5 1358 aa14.9□□□□□ -0.02
TPM1-217ENST00000559108 HSP90AB2PQ58FF8 381 aa14.9□□□□□ -0.02
TPM1-217ENST00000559108 LARP1Q6PKG0 1096 aaKnown RBP14.9□□□□□ -0.02
TPM1-217ENST00000559108 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
TPM1-217ENST00000559108 IP6K1Q92551 441 aa14.89□□□□□ -0.03
TPM1-217ENST00000559108 STRN4Q9NRL3 753 aa14.89□□□□□ -0.03
TPM1-217ENST00000559108 BLMP54132 1417 aaPredicted RBP14.89□□□□□ -0.03
TPM1-217ENST00000559108 FLT4P35916 1363 aa14.88□□□□□ -0.03
TPM1-217ENST00000559108 ERBB3P21860 1342 aa14.88□□□□□ -0.03
TPM1-217ENST00000559108 LRRC37A3O60309 1634 aa14.88□□□□□ -0.03
TPM1-217ENST00000559108 SHANK3Q9BYB0 1731 aa14.87□□□□□ -0.03
TPM1-217ENST00000559108 RGS12O14924 1447 aa14.87□□□□□ -0.03
TPM1-217ENST00000559108 VPS72Q15906 364 aa14.87□□□□□ -0.03
TPM1-217ENST00000559108 ZNF772Q68DY9 489 aaPredicted RBP14.87□□□□□ -0.03
TPM1-217ENST00000559108 QTRT2Q9H974 415 aaKnown RBP14.87□□□□□ -0.03
TPM1-217ENST00000559108 SPATA31A5Q5VU36 1347 aa14.87□□□□□ -0.03
TPM1-217ENST00000559108 SPATA31A7Q8IWB4 1347 aa14.87□□□□□ -0.03
TPM1-217ENST00000559108 INSRP06213 1382 aa14.86□□□□□ -0.03
TPM1-217ENST00000559108 CRB1P82279 1406 aa14.86□□□□□ -0.03
TPM1-217ENST00000559108 ANKRD24Q8TF21 1146 aa14.86□□□□□ -0.03
TPM1-217ENST00000559108 SPATA31A1Q5TZJ5 1347 aa14.86□□□□□ -0.03
TPM1-217ENST00000559108 WDR17Q8IZU2 1322 aa14.86□□□□□ -0.03
TPM1-217ENST00000559108 KIF24Q5T7B8 1368 aa14.85□□□□□ -0.03
TPM1-217ENST00000559108 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
TPM1-217ENST00000559108 PPP2R1AP30153 589 aa14.85□□□□□ -0.03
TPM1-217ENST00000559108 AMPHP49418 695 aa14.85□□□□□ -0.03
TPM1-217ENST00000559108 ILDR2Q71H61 639 aa14.85□□□□□ -0.03
TPM1-217ENST00000559108 LTV1Q96GA3 475 aaPredicted RBP14.85□□□□□ -0.03
TPM1-217ENST00000559108 TRPC5Q9UL62 973 aaPredicted RBP14.85□□□□□ -0.03
TPM1-217ENST00000559108 PARP4Q9UKK3 1724 aaKnown RBP14.85□□□□□ -0.03
TPM1-217ENST00000559108 DISP2A7MBM2 1401 aa14.84□□□□□ -0.03
TPM1-217ENST00000559108 MTHFSP49914 203 aa14.84□□□□□ -0.03
TPM1-217ENST00000559108 GJD4Q96KN9 370 aaPredicted RBP14.84□□□□□ -0.03
TPM1-217ENST00000559108 NCAPD2Q15021 1401 aa14.83□□□□□ -0.03
TPM1-217ENST00000559108 EIF4A2Q14240 407 aaKnown RBP14.82□□□□□ -0.04
TPM1-217ENST00000559108 NBPF6Q5VWK0 638 aa14.82□□□□□ -0.04
TPM1-217ENST00000559108 NBPF4Q96M43 638 aa14.82□□□□□ -0.04
TPM1-217ENST00000559108 USP35Q9P2H5 1018 aa14.82□□□□□ -0.04
TPM1-217ENST00000559108 MEGF6O75095 1541 aa14.82□□□□□ -0.04
TPM1-217ENST00000559108 EVA1CP58658 441 aa14.81□□□□□ -0.04
TPM1-217ENST00000559108 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
TPM1-217ENST00000559108 PRKRIP1Q9H875 184 aaPredicted RBP14.81□□□□□ -0.04
TPM1-217ENST00000559108 RBM6P78332 1123 aaKnown RBP14.8□□□□□ -0.04
TPM1-217ENST00000559108 TOM1L2Q6ZVM7 507 aa14.8□□□□□ -0.04
TPM1-217ENST00000559108 CCDC9Q9Y3X0 531 aaKnown RBP14.8□□□□□ -0.04
TPM1-217ENST00000559108 CSB-PGBD3P0DP91 1061 aa14.79□□□□□ -0.04
TPM1-217ENST00000559108 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
TPM1-217ENST00000559108 PKD1L3Q7Z443 1732 aa14.79□□□□□ -0.04
TPM1-217ENST00000559108 CARD10Q9BWT7 1032 aa14.79□□□□□ -0.04
TPM1-217ENST00000559108 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
TPM1-217ENST00000559108 RXRBP28702 533 aa14.78□□□□□ -0.04
TPM1-217ENST00000559108 IL13P35225 146 aa14.78□□□□□ -0.04
TPM1-217ENST00000559108 NLRP2Q9NX02 1062 aa14.78□□□□□ -0.04
TPM1-217ENST00000559108 CCDC184Q52MB2 194 aa14.77□□□□□ -0.05
TPM1-217ENST00000559108 TCP11L2Q8N4U5 519 aa14.77□□□□□ -0.05
TPM1-217ENST00000559108 EYA1Q99502 592 aa14.77□□□□□ -0.05
TPM1-217ENST00000559108 IGSF1Q8N6C5 1336 aa14.76□□□□□ -0.05
TPM1-217ENST00000559108 RALBP1Q15311 655 aa14.76□□□□□ -0.05
TPM1-217ENST00000559108 BARGINQ6ZT62 677 aa14.76□□□□□ -0.05
TPM1-217ENST00000559108 AEBP1Q8IUX7 1158 aa14.76□□□□□ -0.05
TPM1-217ENST00000559108 SEPT12Q8IYM1 358 aa14.75□□□□□ -0.05
TPM1-217ENST00000559108 MYBBP1AQ9BQG0 1328 aaKnown RBP14.74□□□□□ -0.05
TPM1-217ENST00000559108 OVOS2A0A0G2JMS6 1433 aa14.74□□□□□ -0.05
TPM1-217ENST00000559108 KDRP35968 1356 aa14.73□□□□□ -0.05
TPM1-217ENST00000559108 SBF2Q86WG5 1849 aa14.73□□□□□ -0.05
TPM1-217ENST00000559108 TOGARAM1Q9Y4F4 1720 aa14.73□□□□□ -0.05
TPM1-217ENST00000559108 TNS2Q63HR2 1409 aa14.73□□□□□ -0.05
TPM1-217ENST00000559108 VIRMAQ69YN4 1812 aaKnown RBP14.72□□□□□ -0.05
TPM1-217ENST00000559108 FAM182BQ5T319 152 aa14.72□□□□□ -0.05
TPM1-217ENST00000559108 DIAPH1O60610 1272 aaKnown RBP14.71□□□□□ -0.05
TPM1-217ENST00000559108 THRAP3Q9Y2W1 955 aaKnown RBP14.71□□□□□ -0.05
TPM1-217ENST00000559108 DOT1LQ8TEK3 1739 aa14.7□□□□□ -0.06
TPM1-217ENST00000559108 TNS1Q9HBL0 1735 aaKnown RBP14.7□□□□□ -0.06
TPM1-217ENST00000559108 IL2RBP14784 551 aa14.7□□□□□ -0.06
TPM1-217ENST00000559108 HMOX1P09601 288 aa14.69□□□□□ -0.06
TPM1-217ENST00000559108 SULT6B1Q6IMI4 303 aa14.68□□□□□ -0.06
TPM1-217ENST00000559108 MARCH10Q8NA82 808 aaPredicted RBP14.68□□□□□ -0.06
TPM1-217ENST00000559108 EP400Q96L91 3159 aa14.67□□□□□ -0.06
TPM1-217ENST00000559108 DLG5Q8TDM6 1919 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms