RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 FAM208AQ9UK61 1670 aaKnown RBP24.03■■□□□ 1.44
LRRC28-210ENST00000558879 ARHGEF25Q86VW2 580 aa24.03■■□□□ 1.44
LRRC28-210ENST00000558879 SLC12A5Q9H2X9 1139 aa24.03■■□□□ 1.44
LRRC28-210ENST00000558879 THRAP3Q9Y2W1 955 aaKnown RBP24.03■■□□□ 1.44
LRRC28-210ENST00000558879 TCP11L2Q8N4U5 519 aa24.02■■□□□ 1.44
LRRC28-210ENST00000558879 USP35Q9P2H5 1018 aa24.02■■□□□ 1.44
LRRC28-210ENST00000558879 TIMELESSQ9UNS1 1208 aa24.02■■□□□ 1.44
LRRC28-210ENST00000558879 DEFB132Q7Z7B7 95 aa24.01■■□□□ 1.43
LRRC28-210ENST00000558879 RGPD3A6NKT7 1758 aaPredicted RBP24.01■■□□□ 1.43
LRRC28-210ENST00000558879 RGPD4Q7Z3J3 1758 aa24.01■■□□□ 1.43
LRRC28-210ENST00000558879 SLC24A1O60721 1099 aa24■■□□□ 1.43
LRRC28-210ENST00000558879 SF3B2Q13435 895 aaKnown RBP24■■□□□ 1.43
LRRC28-210ENST00000558879 FAM182BQ5T319 152 aa24■■□□□ 1.43
LRRC28-210ENST00000558879 HDGFL2Q7Z4V5 671 aaPredicted RBP24■■□□□ 1.43
LRRC28-210ENST00000558879 TMC1Q8TDI8 760 aa24■■□□□ 1.43
LRRC28-210ENST00000558879 AXIN2Q9Y2T1 843 aa23.99■■□□□ 1.43
LRRC28-210ENST00000558879 WDR17Q8IZU2 1322 aa23.99■■□□□ 1.43
LRRC28-210ENST00000558879 NUP188Q5SRE5 1749 aa23.98■■□□□ 1.43
LRRC28-210ENST00000558879 ZBTB7CA1YPR0 619 aa23.98■■□□□ 1.43
LRRC28-210ENST00000558879 NME9Q86XW9 330 aa23.98■■□□□ 1.43
LRRC28-210ENST00000558879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.98■■□□□ 1.43
LRRC28-210ENST00000558879 TERF2IPQ9NYB0 399 aa23.98■■□□□ 1.43
LRRC28-210ENST00000558879 ZRANB1Q9UGI0 708 aa23.98■■□□□ 1.43
LRRC28-210ENST00000558879 ANKRD36BQ8N2N9 1353 aa23.97■■□□□ 1.43
LRRC28-210ENST00000558879 SOX12O15370 315 aa23.94■■□□□ 1.42
LRRC28-210ENST00000558879 BAG6P46379 1132 aa23.94■■□□□ 1.42
LRRC28-210ENST00000558879 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
LRRC28-210ENST00000558879 RGPD2P0DJD1 1756 aa23.93■■□□□ 1.42
LRRC28-210ENST00000558879 FAM196AQ6ZSG2 479 aa23.93■■□□□ 1.42
LRRC28-210ENST00000558879 LRP5O75197 1615 aa23.92■■□□□ 1.42
LRRC28-210ENST00000558879 OVOS2A0A0G2JMS6 1433 aa23.92■■□□□ 1.42
LRRC28-210ENST00000558879 TMF1P82094 1093 aa23.91■■□□□ 1.42
LRRC28-210ENST00000558879 TOM1L2Q6ZVM7 507 aa23.91■■□□□ 1.42
LRRC28-210ENST00000558879 PDE3BQ13370 1112 aa23.89■■□□□ 1.41
LRRC28-210ENST00000558879 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
LRRC28-210ENST00000558879 ERBB3P21860 1342 aa23.88■■□□□ 1.41
LRRC28-210ENST00000558879 CARD10Q9BWT7 1032 aa23.88■■□□□ 1.41
LRRC28-210ENST00000558879 ANKRD26Q9UPS8 1709 aa23.87■■□□□ 1.41
LRRC28-210ENST00000558879 NHSQ6T4R5 1651 aa23.86■■□□□ 1.41
LRRC28-210ENST00000558879 BCL9O00512 1426 aa23.86■■□□□ 1.41
LRRC28-210ENST00000558879 TNS2Q63HR2 1409 aa23.86■■□□□ 1.41
LRRC28-210ENST00000558879 TRIM37O94972 964 aa23.86■■□□□ 1.41
LRRC28-210ENST00000558879 PARD3Q8TEW0 1356 aa23.86■■□□□ 1.41
LRRC28-210ENST00000558879 SHANK3Q9BYB0 1731 aa23.85■■□□□ 1.41
LRRC28-210ENST00000558879 EN1Q05925 392 aaPredicted RBP23.85■■□□□ 1.41
LRRC28-210ENST00000558879 CDCA7Q9BWT1 371 aaPredicted RBP23.85■■□□□ 1.41
LRRC28-210ENST00000558879 DDB1Q16531 1140 aa23.83■■□□□ 1.41
LRRC28-210ENST00000558879 C11orf95C9JLR9 678 aaPredicted RBP23.82■■□□□ 1.4
LRRC28-210ENST00000558879 CSB-PGBD3P0DP91 1061 aa23.82■■□□□ 1.4
LRRC28-210ENST00000558879 CDCA8Q53HL2 280 aa23.82■■□□□ 1.4
LRRC28-210ENST00000558879 CAMKK2Q96RR4 588 aa23.81■■□□□ 1.4
LRRC28-210ENST00000558879 EZH2Q15910 746 aaKnown RBP23.79■■□□□ 1.4
LRRC28-210ENST00000558879 COG3Q96JB2 828 aa23.79■■□□□ 1.4
LRRC28-210ENST00000558879 MAP2P11137 1827 aaKnown RBP23.79■■□□□ 1.4
LRRC28-210ENST00000558879 SRCAPQ6ZRS2 3230 aa23.79■■□□□ 1.4
LRRC28-210ENST00000558879 RTL1A6NKG5 1358 aa23.78■■□□□ 1.4
LRRC28-210ENST00000558879 BTAF1O14981 1849 aa23.77■■□□□ 1.4
LRRC28-210ENST00000558879 APBA3O96018 575 aa23.77■■□□□ 1.4
LRRC28-210ENST00000558879 ANKRD24Q8TF21 1146 aa23.77■■□□□ 1.4
LRRC28-210ENST00000558879 MAP3K19Q56UN5 1328 aa23.77■■□□□ 1.4
LRRC28-210ENST00000558879 MARCH10Q8NA82 808 aaPredicted RBP23.76■■□□□ 1.39
LRRC28-210ENST00000558879 CCER1Q8TC90 406 aaPredicted RBP23.76■■□□□ 1.39
LRRC28-210ENST00000558879 IP6K1Q92551 441 aa23.76■■□□□ 1.39
LRRC28-210ENST00000558879 NSD3Q9BZ95 1437 aa23.76■■□□□ 1.39
LRRC28-210ENST00000558879 FYB1O15117 783 aa23.75■■□□□ 1.39
LRRC28-210ENST00000558879 KAT6BQ8WYB5 2073 aa23.75■■□□□ 1.39
LRRC28-210ENST00000558879 DOT1LQ8TEK3 1739 aa23.73■■□□□ 1.39
LRRC28-210ENST00000558879 HOXC9P31274 260 aa23.72■■□□□ 1.39
LRRC28-210ENST00000558879 NLRP2Q9NX02 1062 aa23.72■■□□□ 1.39
LRRC28-210ENST00000558879 PSDA5PKW4 1024 aaPredicted RBP23.71■■□□□ 1.39
LRRC28-210ENST00000558879 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
LRRC28-210ENST00000558879 IL2RBP14784 551 aa23.7■■□□□ 1.38
LRRC28-210ENST00000558879 FBLN1P23142 703 aa23.7■■□□□ 1.38
LRRC28-210ENST00000558879 CARD14Q9BXL6 1004 aa23.7■■□□□ 1.38
LRRC28-210ENST00000558879 CASZ1Q86V15 1759 aa23.7■■□□□ 1.38
LRRC28-210ENST00000558879 EXOC5O00471 708 aa23.69■■□□□ 1.38
LRRC28-210ENST00000558879 KIF24Q5T7B8 1368 aa23.68■■□□□ 1.38
LRRC28-210ENST00000558879 BCL11BQ9C0K0 894 aaPredicted RBP23.68■■□□□ 1.38
LRRC28-210ENST00000558879 PAPPAQ13219 1627 aa23.67■■□□□ 1.38
LRRC28-210ENST00000558879 PTF1AQ7RTS3 328 aa23.67■■□□□ 1.38
LRRC28-210ENST00000558879 PKD1L3Q7Z443 1732 aa23.67■■□□□ 1.38
LRRC28-210ENST00000558879 MEGF6O75095 1541 aa23.66■■□□□ 1.38
LRRC28-210ENST00000558879 PLSCR1O15162 318 aa23.66■■□□□ 1.38
LRRC28-210ENST00000558879 EIF4G2P78344 907 aaKnown RBP eCLIP23.66■■□□□ 1.38
LRRC28-210ENST00000558879 HSPA5P11021 654 aaKnown RBP23.65■■□□□ 1.38
LRRC28-210ENST00000558879 AMPHP49418 695 aa23.65■■□□□ 1.38
LRRC28-210ENST00000558879 R3HDM1Q15032 1099 aaKnown RBP23.65■■□□□ 1.38
LRRC28-210ENST00000558879 RRS1Q15050 365 aaKnown RBP23.65■■□□□ 1.38
LRRC28-210ENST00000558879 FLT4P35916 1363 aa23.65■■□□□ 1.38
LRRC28-210ENST00000558879 LY75O60449 1722 aa23.64■■□□□ 1.37
LRRC28-210ENST00000558879 INSRP06213 1382 aa23.64■■□□□ 1.37
LRRC28-210ENST00000558879 SMG6Q86US8 1419 aaKnown RBP23.63■■□□□ 1.37
LRRC28-210ENST00000558879 LTV1Q96GA3 475 aaPredicted RBP23.63■■□□□ 1.37
LRRC28-210ENST00000558879 NCAPD2Q15021 1401 aa23.61■■□□□ 1.37
LRRC28-210ENST00000558879 QSER1Q2KHR3 1735 aa23.61■■□□□ 1.37
LRRC28-210ENST00000558879 TUBGCP6Q96RT7 1819 aa23.59■■□□□ 1.37
LRRC28-210ENST00000558879 TOGARAM1Q9Y4F4 1720 aa23.59■■□□□ 1.37
LRRC28-210ENST00000558879 CGNL1Q0VF96 1302 aa23.59■■□□□ 1.37
LRRC28-210ENST00000558879 ITGB4P16144 1822 aa23.58■■□□□ 1.37
LRRC28-210ENST00000558879 KCNQ2O43526 872 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms