RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 TTC21AQ8NDW8 1320 aa19.32■□□□□ 0.68
VPS18-203ENST00000558855 NME9Q86XW9 330 aa19.31■□□□□ 0.68
VPS18-203ENST00000558855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
VPS18-203ENST00000558855 SLC12A5Q9H2X9 1139 aa19.31■□□□□ 0.68
VPS18-203ENST00000558855 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
VPS18-203ENST00000558855 CAMKK2Q96RR4 588 aa19.3■□□□□ 0.68
VPS18-203ENST00000558855 TESK2Q96S53 571 aa19.3■□□□□ 0.68
VPS18-203ENST00000558855 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
VPS18-203ENST00000558855 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
VPS18-203ENST00000558855 WDR17Q8IZU2 1322 aa19.29■□□□□ 0.68
VPS18-203ENST00000558855 TRIM26Q12899 539 aaPredicted RBP19.29■□□□□ 0.68
VPS18-203ENST00000558855 THRAP3Q9Y2W1 955 aaKnown RBP19.29■□□□□ 0.68
VPS18-203ENST00000558855 USP31Q70CQ4 1352 aa19.29■□□□□ 0.68
VPS18-203ENST00000558855 PDE3BQ13370 1112 aa19.28■□□□□ 0.68
VPS18-203ENST00000558855 PTF1AQ7RTS3 328 aa19.28■□□□□ 0.68
VPS18-203ENST00000558855 ABCC6O95255 1503 aa19.28■□□□□ 0.68
VPS18-203ENST00000558855 OVOS2A0A0J9YW53 1432 aa19.27■□□□□ 0.68
VPS18-203ENST00000558855 OVOS2Q6IE36 1432 aa19.27■□□□□ 0.68
VPS18-203ENST00000558855 RGPD3A6NKT7 1758 aaPredicted RBP19.27■□□□□ 0.68
VPS18-203ENST00000558855 RGPD4Q7Z3J3 1758 aa19.27■□□□□ 0.68
VPS18-203ENST00000558855 RGPD2P0DJD1 1756 aa19.27■□□□□ 0.67
VPS18-203ENST00000558855 APBA3O96018 575 aa19.26■□□□□ 0.67
VPS18-203ENST00000558855 R3HDM1Q15032 1099 aaKnown RBP19.26■□□□□ 0.67
VPS18-203ENST00000558855 TOM1L2Q6ZVM7 507 aa19.26■□□□□ 0.67
VPS18-203ENST00000558855 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
VPS18-203ENST00000558855 MYOM1P52179 1685 aa19.25■□□□□ 0.67
VPS18-203ENST00000558855 ST20-MTHFSA0A0A6YYL1 179 aa19.25■□□□□ 0.67
VPS18-203ENST00000558855 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
VPS18-203ENST00000558855 OVOS2A0A0G2JMS6 1433 aa19.25■□□□□ 0.67
VPS18-203ENST00000558855 KCNH5Q8NCM2 988 aa19.24■□□□□ 0.67
VPS18-203ENST00000558855 MARCH10Q8NA82 808 aaPredicted RBP19.22■□□□□ 0.67
VPS18-203ENST00000558855 DDB1Q16531 1140 aa19.2■□□□□ 0.66
VPS18-203ENST00000558855 CARD10Q9BWT7 1032 aa19.2■□□□□ 0.66
VPS18-203ENST00000558855 KIF20BQ96Q89 1820 aa19.2■□□□□ 0.66
VPS18-203ENST00000558855 NHSQ6T4R5 1651 aa19.2■□□□□ 0.66
VPS18-203ENST00000558855 FAM208AQ9UK61 1670 aaKnown RBP19.2■□□□□ 0.66
VPS18-203ENST00000558855 SHANK3Q9BYB0 1731 aa19.2■□□□□ 0.66
VPS18-203ENST00000558855 ERBB3P21860 1342 aa19.19■□□□□ 0.66
VPS18-203ENST00000558855 PARD3Q8TEW0 1356 aa19.19■□□□□ 0.66
VPS18-203ENST00000558855 TNS2Q63HR2 1409 aa19.18■□□□□ 0.66
VPS18-203ENST00000558855 FBLN1P23142 703 aa19.18■□□□□ 0.66
VPS18-203ENST00000558855 HDGFL2Q7Z4V5 671 aaPredicted RBP19.18■□□□□ 0.66
VPS18-203ENST00000558855 CASZ1Q86V15 1759 aa19.18■□□□□ 0.66
VPS18-203ENST00000558855 USP47Q96K76 1375 aa19.18■□□□□ 0.66
VPS18-203ENST00000558855 CSB-PGBD3P0DP91 1061 aa19.17■□□□□ 0.66
VPS18-203ENST00000558855 PUS7Q96PZ0 661 aaKnown RBP19.16■□□□□ 0.66
VPS18-203ENST00000558855 BTAF1O14981 1849 aa19.16■□□□□ 0.66
VPS18-203ENST00000558855 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
VPS18-203ENST00000558855 BCL9O00512 1426 aa19.15■□□□□ 0.66
VPS18-203ENST00000558855 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.65
VPS18-203ENST00000558855 TERF2IPQ9NYB0 399 aa19.14■□□□□ 0.65
VPS18-203ENST00000558855 ANKRD24Q8TF21 1146 aa19.13■□□□□ 0.65
VPS18-203ENST00000558855 ANKRD36BQ8N2N9 1353 aa19.12■□□□□ 0.65
VPS18-203ENST00000558855 NINLQ9Y2I6 1382 aa19.12■□□□□ 0.65
VPS18-203ENST00000558855 PROM2Q8N271 834 aa19.12■□□□□ 0.65
VPS18-203ENST00000558855 NLRP2Q9NX02 1062 aa19.11■□□□□ 0.65
VPS18-203ENST00000558855 DOT1LQ8TEK3 1739 aa19.11■□□□□ 0.65
VPS18-203ENST00000558855 PAPPAQ13219 1627 aa19.11■□□□□ 0.65
VPS18-203ENST00000558855 MAP3K19Q56UN5 1328 aa19.1■□□□□ 0.65
VPS18-203ENST00000558855 KCNQ2O43526 872 aa19.1■□□□□ 0.65
VPS18-203ENST00000558855 CDCA7Q9BWT1 371 aaPredicted RBP19.1■□□□□ 0.65
VPS18-203ENST00000558855 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
VPS18-203ENST00000558855 PDGFDQ9GZP0 370 aaPredicted RBP19.09■□□□□ 0.65
VPS18-203ENST00000558855 EXOC5O00471 708 aa19.07■□□□□ 0.64
VPS18-203ENST00000558855 PLSCR1O15162 318 aa19.07■□□□□ 0.64
VPS18-203ENST00000558855 IP6K1Q92551 441 aa19.07■□□□□ 0.64
VPS18-203ENST00000558855 LTV1Q96GA3 475 aaPredicted RBP19.07■□□□□ 0.64
VPS18-203ENST00000558855 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
VPS18-203ENST00000558855 ACSBG1Q96GR2 724 aa19.06■□□□□ 0.64
VPS18-203ENST00000558855 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
VPS18-203ENST00000558855 TUBGCP6Q96RT7 1819 aa19.06■□□□□ 0.64
VPS18-203ENST00000558855 MEGF6O75095 1541 aa19.05■□□□□ 0.64
VPS18-203ENST00000558855 FYB1O15117 783 aa19.05■□□□□ 0.64
VPS18-203ENST00000558855 IL2RBP14784 551 aa19.05■□□□□ 0.64
VPS18-203ENST00000558855 HOXC9P31274 260 aa19.05■□□□□ 0.64
VPS18-203ENST00000558855 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
VPS18-203ENST00000558855 C11orf95C9JLR9 678 aaPredicted RBP19.04■□□□□ 0.64
VPS18-203ENST00000558855 TMF1P82094 1093 aa19.04■□□□□ 0.64
VPS18-203ENST00000558855 RRS1Q15050 365 aaKnown RBP19.04■□□□□ 0.64
VPS18-203ENST00000558855 COG3Q96JB2 828 aa19.04■□□□□ 0.64
VPS18-203ENST00000558855 PCGF6Q9BYE7 350 aa19.04■□□□□ 0.64
VPS18-203ENST00000558855 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
VPS18-203ENST00000558855 NBPF14Q5TI25 921 aa19.02■□□□□ 0.64
VPS18-203ENST00000558855 TXNRD1Q16881 649 aa19.01■□□□□ 0.63
VPS18-203ENST00000558855 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
VPS18-203ENST00000558855 LY75O60449 1722 aa19■□□□□ 0.63
VPS18-203ENST00000558855 MAP2P11137 1827 aaKnown RBP19■□□□□ 0.63
VPS18-203ENST00000558855 RTL1A6NKG5 1358 aa18.99■□□□□ 0.63
VPS18-203ENST00000558855 TOGARAM1Q9Y4F4 1720 aa18.99■□□□□ 0.63
VPS18-203ENST00000558855 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
VPS18-203ENST00000558855 NSD2O96028 1365 aa18.97■□□□□ 0.63
VPS18-203ENST00000558855 AMPHP49418 695 aa18.97■□□□□ 0.63
VPS18-203ENST00000558855 NBPF6Q5VWK0 638 aa18.97■□□□□ 0.63
VPS18-203ENST00000558855 NBPF4Q96M43 638 aa18.97■□□□□ 0.63
VPS18-203ENST00000558855 QSER1Q2KHR3 1735 aa18.97■□□□□ 0.63
VPS18-203ENST00000558855 PKD1L3Q7Z443 1732 aa18.96■□□□□ 0.63
VPS18-203ENST00000558855 DDX54Q8TDD1 881 aaKnown RBP18.95■□□□□ 0.62
VPS18-203ENST00000558855 LRRC4BQ9NT99 713 aa18.95■□□□□ 0.62
VPS18-203ENST00000558855 SLC24A1O60721 1099 aa18.94■□□□□ 0.62
VPS18-203ENST00000558855 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms