RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 C19orf44Q9H6X5 657 aa8.53□□□□□ -1.04
LRRC28-208ENST00000558771 TMEM131LA2VDJ0 1609 aa8.53□□□□□ -1.04
LRRC28-208ENST00000558771 ADAMTS13Q76LX8 1427 aa8.53□□□□□ -1.04
LRRC28-208ENST00000558771 RPRD2Q5VT52 1461 aaKnown RBP8.52□□□□□ -1.05
LRRC28-208ENST00000558771 NUTM2DQ5VT03 806 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-208ENST00000558771 BRINP3Q76B58 766 aa8.52□□□□□ -1.05
LRRC28-208ENST00000558771 KCNK17Q96T54 332 aa8.52□□□□□ -1.05
LRRC28-208ENST00000558771 PIK3R4Q99570 1358 aa8.51□□□□□ -1.05
LRRC28-208ENST00000558771 PTPREP23469 700 aa8.51□□□□□ -1.05
LRRC28-208ENST00000558771 DMRTA1Q5VZB9 504 aa8.51□□□□□ -1.05
LRRC28-208ENST00000558771 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.51□□□□□ -1.05
LRRC28-208ENST00000558771 RGS12O14924 1447 aa8.51□□□□□ -1.05
LRRC28-208ENST00000558771 GRXCR2A6NFK2 248 aa8.5□□□□□ -1.05
LRRC28-208ENST00000558771 PTPRUQ92729 1446 aa8.5□□□□□ -1.05
LRRC28-208ENST00000558771 SETD5Q9C0A6 1442 aa8.5□□□□□ -1.05
LRRC28-208ENST00000558771 ADGRL2O95490 1459 aa8.5□□□□□ -1.05
LRRC28-208ENST00000558771 ASXL1Q8IXJ9 1541 aa8.49□□□□□ -1.05
LRRC28-208ENST00000558771 LOC105371045A0A1W2PR82 267 aa8.49□□□□□ -1.05
LRRC28-208ENST00000558771 RBM6P78332 1123 aaKnown RBP8.49□□□□□ -1.05
LRRC28-208ENST00000558771 QTRT2Q9H974 415 aaKnown RBP8.49□□□□□ -1.05
LRRC28-208ENST00000558771 AMOTL2Q9Y2J4 779 aa8.49□□□□□ -1.05
LRRC28-208ENST00000558771 NHSL1Q5SYE7 1610 aa8.49□□□□□ -1.05
LRRC28-208ENST00000558771 TRPM2O94759 1503 aa8.49□□□□□ -1.05
LRRC28-208ENST00000558771 DCCP43146 1447 aa8.48□□□□□ -1.05
LRRC28-208ENST00000558771 MST1RQ04912 1400 aa8.48□□□□□ -1.05
LRRC28-208ENST00000558771 ANKRD50Q9ULJ7 1429 aa8.48□□□□□ -1.05
LRRC28-208ENST00000558771 NBR1Q14596 966 aa8.48□□□□□ -1.05
LRRC28-208ENST00000558771 C8orf37Q96NL8 207 aa8.48□□□□□ -1.05
LRRC28-208ENST00000558771 TK2O00142 265 aa8.47□□□□□ -1.05
LRRC28-208ENST00000558771 C6orf132Q5T0Z8 1188 aa8.47□□□□□ -1.05
LRRC28-208ENST00000558771 DDX17Q92841 729 aaKnown RBP8.47□□□□□ -1.05
LRRC28-208ENST00000558771 LRRC59Q96AG4 307 aaKnown RBP8.47□□□□□ -1.05
LRRC28-208ENST00000558771 UNC13BO14795 1591 aa8.47□□□□□ -1.05
LRRC28-208ENST00000558771 PNPLA6Q8IY17 1366 aa8.47□□□□□ -1.05
LRRC28-208ENST00000558771 E9PCH4 1651 aa8.46□□□□□ -1.05
LRRC28-208ENST00000558771 EP400Q96L91 3159 aa8.46□□□□□ -1.05
LRRC28-208ENST00000558771 ADGRD1Q6QNK2 874 aa8.46□□□□□ -1.06
LRRC28-208ENST00000558771 XRN1Q8IZH2 1706 aaKnown RBP8.46□□□□□ -1.06
LRRC28-208ENST00000558771 NRXN3Q9Y4C0 1643 aa8.45□□□□□ -1.06
LRRC28-208ENST00000558771 OSBPP22059 807 aa8.45□□□□□ -1.06
LRRC28-208ENST00000558771 EN1Q05925 392 aaPredicted RBP8.45□□□□□ -1.06
LRRC28-208ENST00000558771 ATAD2Q6PL18 1390 aa8.45□□□□□ -1.06
LRRC28-208ENST00000558771 ADAMTS2O95450 1211 aa8.44□□□□□ -1.06
LRRC28-208ENST00000558771 COL9A1P20849 921 aa8.44□□□□□ -1.06
LRRC28-208ENST00000558771 MLLT3P42568 568 aaPredicted RBP8.44□□□□□ -1.06
LRRC28-208ENST00000558771 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
LRRC28-208ENST00000558771 FAM50AQ14320 339 aaKnown RBP8.44□□□□□ -1.06
LRRC28-208ENST00000558771 NGLY1Q96IV0 654 aa8.44□□□□□ -1.06
LRRC28-208ENST00000558771 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
LRRC28-208ENST00000558771 SLC4A5Q9BY07 1137 aa8.44□□□□□ -1.06
LRRC28-208ENST00000558771 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
LRRC28-208ENST00000558771 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
LRRC28-208ENST00000558771 SEMA3EO15041 775 aa8.43□□□□□ -1.06
LRRC28-208ENST00000558771 MAP3K7O43318 606 aa8.43□□□□□ -1.06
LRRC28-208ENST00000558771 METP08581 1390 aa8.43□□□□□ -1.06
LRRC28-208ENST00000558771 ADGRL3Q9HAR2 1447 aa8.43□□□□□ -1.06
LRRC28-208ENST00000558771 SETBP1Q9Y6X0 1596 aa8.43□□□□□ -1.06
LRRC28-208ENST00000558771 HRO43593 1189 aa8.42□□□□□ -1.06
LRRC28-208ENST00000558771 TSR1Q2NL82 804 aaKnown RBP8.42□□□□□ -1.06
LRRC28-208ENST00000558771 USP21Q9UK80 565 aa8.42□□□□□ -1.06
LRRC28-208ENST00000558771 IQGAP3Q86VI3 1631 aa8.42□□□□□ -1.06
LRRC28-208ENST00000558771 NALCNQ8IZF0 1738 aa8.42□□□□□ -1.06
LRRC28-208ENST00000558771 C1orf167Q5SNV9 1468 aa8.41□□□□□ -1.06
LRRC28-208ENST00000558771 TRPC5Q9UL62 973 aaPredicted RBP8.41□□□□□ -1.06
LRRC28-208ENST00000558771 LAMC1P11047 1609 aa8.4□□□□□ -1.06
LRRC28-208ENST00000558771 ATRNO75882 1429 aa8.4□□□□□ -1.06
LRRC28-208ENST00000558771 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-208ENST00000558771 FNBP4Q8N3X1 1017 aaPredicted RBP8.4□□□□□ -1.06
LRRC28-208ENST00000558771 PTCH1Q13635 1447 aa8.39□□□□□ -1.07
LRRC28-208ENST00000558771 ZNF326Q5BKZ1 582 aaKnown RBP8.39□□□□□ -1.07
LRRC28-208ENST00000558771 STAC3Q96MF2 364 aa8.39□□□□□ -1.07
LRRC28-208ENST00000558771 ORAI2Q96SN7 254 aa8.39□□□□□ -1.07
LRRC28-208ENST00000558771 NUP155O75694 1391 aa8.38□□□□□ -1.07
LRRC28-208ENST00000558771 TESPA1A2RU30 521 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-208ENST00000558771 BHMG1C9JSJ3 638 aaPredicted RBP8.38□□□□□ -1.07
LRRC28-208ENST00000558771 SLC24A1O60721 1099 aa8.38□□□□□ -1.07
LRRC28-208ENST00000558771 PROX2Q3B8N5 592 aa8.38□□□□□ -1.07
LRRC28-208ENST00000558771 SPHKAPQ2M3C7 1700 aa8.37□□□□□ -1.07
LRRC28-208ENST00000558771 COL22A1Q8NFW1 1626 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-208ENST00000558771 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-208ENST00000558771 CCDC125Q86Z20 511 aa8.37□□□□□ -1.07
LRRC28-208ENST00000558771 RNF166Q96A37 237 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-208ENST00000558771 NEXMIFQ5QGS0 1516 aa8.37□□□□□ -1.07
LRRC28-208ENST00000558771 ROCK1Q13464 1354 aa8.36□□□□□ -1.07
LRRC28-208ENST00000558771 CDHR5Q9HBB8 845 aa8.36□□□□□ -1.07
LRRC28-208ENST00000558771 MYOM2P54296 1465 aa8.36□□□□□ -1.07
LRRC28-208ENST00000558771 BCL9LQ86UU0 1499 aa8.36□□□□□ -1.07
LRRC28-208ENST00000558771 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
LRRC28-208ENST00000558771 RABGEF1Q9UJ41 708 aa8.35□□□□□ -1.07
LRRC28-208ENST00000558771 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
LRRC28-208ENST00000558771 MARF1Q9Y4F3 1742 aaKnown RBP8.34□□□□□ -1.07
LRRC28-208ENST00000558771 CLTCL1P53675 1640 aa8.34□□□□□ -1.07
LRRC28-208ENST00000558771 TRIM6-TRIM34B2RNG4 842 aa8.34□□□□□ -1.07
LRRC28-208ENST00000558771 GJD4Q96KN9 370 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-208ENST00000558771 NPDC1Q9NQX5 325 aaPredicted RBP8.34□□□□□ -1.07
LRRC28-208ENST00000558771 KIAA1468Q9P260 1216 aa8.34□□□□□ -1.07
LRRC28-208ENST00000558771 NPHP3Q7Z494 1330 aa8.33□□□□□ -1.08
LRRC28-208ENST00000558771 BLMP54132 1417 aaPredicted RBP8.33□□□□□ -1.08
LRRC28-208ENST00000558771 PRSS12P56730 875 aa8.33□□□□□ -1.08
LRRC28-208ENST00000558771 DEFB132Q7Z7B7 95 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms