RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
LINC01220-201ENST00000558575 PTGER2P43116 358 aa21.74■■□□□ 1.07
LINC01220-201ENST00000558575 ZBTB7AO95365 584 aa21.73■■□□□ 1.07
LINC01220-201ENST00000558575 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
LINC01220-201ENST00000558575 PUS7Q96PZ0 661 aaKnown RBP21.73■■□□□ 1.07
LINC01220-201ENST00000558575 TCP11L2Q8N4U5 519 aa21.72■■□□□ 1.07
LINC01220-201ENST00000558575 ACEP12821 1306 aa21.72■■□□□ 1.07
LINC01220-201ENST00000558575 SLC24A1O60721 1099 aa21.71■■□□□ 1.07
LINC01220-201ENST00000558575 TMF1P82094 1093 aa21.71■■□□□ 1.07
LINC01220-201ENST00000558575 OVOS2A0A0G2JMS6 1433 aa21.71■■□□□ 1.07
LINC01220-201ENST00000558575 OVOS2A0A0J9YW53 1432 aa21.71■■□□□ 1.07
LINC01220-201ENST00000558575 OVOS2Q6IE36 1432 aa21.71■■□□□ 1.07
LINC01220-201ENST00000558575 PPIP5K1Q6PFW1 1433 aa21.71■■□□□ 1.07
LINC01220-201ENST00000558575 CEP350Q5VT06 3117 aa21.7■■□□□ 1.06
LINC01220-201ENST00000558575 EVA1CP58658 441 aa21.7■■□□□ 1.06
LINC01220-201ENST00000558575 NUTM2GQ5VZR2 741 aa21.7■■□□□ 1.06
LINC01220-201ENST00000558575 PTF1AQ7RTS3 328 aa21.7■■□□□ 1.06
LINC01220-201ENST00000558575 POLR3AO14802 1390 aaPredicted RBP21.7■■□□□ 1.06
LINC01220-201ENST00000558575 C11orf95C9JLR9 678 aaPredicted RBP21.68■■□□□ 1.06
LINC01220-201ENST00000558575 PLSCR1O15162 318 aa21.68■■□□□ 1.06
LINC01220-201ENST00000558575 SYT17Q9BSW7 474 aa21.68■■□□□ 1.06
LINC01220-201ENST00000558575 FHDC1Q9C0D6 1143 aaPredicted RBP21.68■■□□□ 1.06
LINC01220-201ENST00000558575 SLC12A5Q9H2X9 1139 aa21.68■■□□□ 1.06
LINC01220-201ENST00000558575 ATF5Q9Y2D1 282 aaPredicted RBP21.68■■□□□ 1.06
LINC01220-201ENST00000558575 COL5A2P05997 1499 aaPredicted RBP21.67■■□□□ 1.06
LINC01220-201ENST00000558575 PROM2Q8N271 834 aa21.66■■□□□ 1.06
LINC01220-201ENST00000558575 CPDO75976 1380 aa21.64■■□□□ 1.06
LINC01220-201ENST00000558575 TMC1Q8TDI8 760 aa21.64■■□□□ 1.05
LINC01220-201ENST00000558575 THRAP3Q9Y2W1 955 aaKnown RBP21.64■■□□□ 1.05
LINC01220-201ENST00000558575 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
LINC01220-201ENST00000558575 BCL11BQ9C0K0 894 aaPredicted RBP21.63■■□□□ 1.05
LINC01220-201ENST00000558575 RGPD5Q99666 1765 aa21.62■■□□□ 1.05
LINC01220-201ENST00000558575 SGIP1Q9BQI5 828 aa21.62■■□□□ 1.05
LINC01220-201ENST00000558575 CRB1P82279 1406 aa21.62■■□□□ 1.05
LINC01220-201ENST00000558575 CPSF1Q10570 1443 aaKnown RBP21.62■■□□□ 1.05
LINC01220-201ENST00000558575 CD163L1Q9NR16 1453 aa21.61■■□□□ 1.05
LINC01220-201ENST00000558575 COL18A1P39060 1754 aa21.61■■□□□ 1.05
LINC01220-201ENST00000558575 ZEB1P37275 1124 aaPredicted RBP21.6■■□□□ 1.05
LINC01220-201ENST00000558575 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
LINC01220-201ENST00000558575 ZNF692Q9BU19 519 aaPredicted RBP21.6■■□□□ 1.05
LINC01220-201ENST00000558575 USP19O94966 1318 aa21.59■■□□□ 1.05
LINC01220-201ENST00000558575 PAPPAQ13219 1627 aa21.58■■□□□ 1.05
LINC01220-201ENST00000558575 USP6P35125 1406 aa21.58■■□□□ 1.05
LINC01220-201ENST00000558575 COL24A1Q17RW2 1714 aa21.56■■□□□ 1.04
LINC01220-201ENST00000558575 GIGYF1O75420 1035 aaPredicted RBP21.55■■□□□ 1.04
LINC01220-201ENST00000558575 SLC15A2Q16348 729 aa21.55■■□□□ 1.04
LINC01220-201ENST00000558575 MTFR1LQ9H019 292 aa21.55■■□□□ 1.04
LINC01220-201ENST00000558575 STK32BQ9NY57 414 aa21.55■■□□□ 1.04
LINC01220-201ENST00000558575 TTC21BQ7Z4L5 1316 aa21.55■■□□□ 1.04
LINC01220-201ENST00000558575 NHSQ6T4R5 1651 aa21.54■■□□□ 1.04
LINC01220-201ENST00000558575 A0A1W2PP64 1363 aa21.54■■□□□ 1.04
LINC01220-201ENST00000558575 KTN1Q86UP2 1357 aaKnown RBP21.54■■□□□ 1.04
LINC01220-201ENST00000558575 MAP3K5Q99683 1374 aa21.54■■□□□ 1.04
LINC01220-201ENST00000558575 POLR3GLQ9BT43 218 aa21.54■■□□□ 1.04
LINC01220-201ENST00000558575 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
LINC01220-201ENST00000558575 BCL9O00512 1426 aa21.54■■□□□ 1.04
LINC01220-201ENST00000558575 BRD4O60885 1362 aaPredicted RBP21.53■■□□□ 1.04
LINC01220-201ENST00000558575 DDB1Q16531 1140 aa21.53■■□□□ 1.04
LINC01220-201ENST00000558575 TXNRD1Q16881 649 aa21.53■■□□□ 1.04
LINC01220-201ENST00000558575 HDGFL2Q7Z4V5 671 aaPredicted RBP21.53■■□□□ 1.04
LINC01220-201ENST00000558575 MARCH10Q8NA82 808 aaPredicted RBP21.53■■□□□ 1.04
LINC01220-201ENST00000558575 KIF7Q2M1P5 1343 aa21.53■■□□□ 1.04
LINC01220-201ENST00000558575 ABTB2Q8N961 1025 aa21.52■■□□□ 1.04
LINC01220-201ENST00000558575 QSER1Q2KHR3 1735 aa21.52■■□□□ 1.03
LINC01220-201ENST00000558575 TUBGCP6Q96RT7 1819 aa21.51■■□□□ 1.03
LINC01220-201ENST00000558575 GCP02774 474 aa21.51■■□□□ 1.03
LINC01220-201ENST00000558575 ARXQ96QS3 562 aa21.51■■□□□ 1.03
LINC01220-201ENST00000558575 CARD14Q9BXL6 1004 aa21.51■■□□□ 1.03
LINC01220-201ENST00000558575 GOLGB1Q14789 3259 aaKnown RBP21.51■■□□□ 1.03
LINC01220-201ENST00000558575 BTAF1O14981 1849 aa21.5■■□□□ 1.03
LINC01220-201ENST00000558575 SLIT3O75094 1523 aa21.5■■□□□ 1.03
LINC01220-201ENST00000558575 AATKQ6ZMQ8 1374 aa21.49■■□□□ 1.03
LINC01220-201ENST00000558575 ANKRD36BQ8N2N9 1353 aa21.49■■□□□ 1.03
LINC01220-201ENST00000558575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.49■■□□□ 1.03
LINC01220-201ENST00000558575 KAT6BQ8WYB5 2073 aa21.49■■□□□ 1.03
LINC01220-201ENST00000558575 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
LINC01220-201ENST00000558575 TTC21AQ8NDW8 1320 aa21.47■■□□□ 1.03
LINC01220-201ENST00000558575 PIK3C2AO00443 1686 aa21.47■■□□□ 1.03
LINC01220-201ENST00000558575 NLRP6P59044 892 aa21.46■■□□□ 1.03
LINC01220-201ENST00000558575 NME9Q86XW9 330 aa21.46■■□□□ 1.03
LINC01220-201ENST00000558575 CCDC7Q96M83 1385 aa21.46■■□□□ 1.03
LINC01220-201ENST00000558575 EDC4Q6P2E9 1401 aaKnown RBP21.46■■□□□ 1.03
LINC01220-201ENST00000558575 ZBTB7CA1YPR0 619 aa21.45■■□□□ 1.02
LINC01220-201ENST00000558575 GPR162Q16538 588 aa21.45■■□□□ 1.02
LINC01220-201ENST00000558575 NLRP13Q86W25 1043 aa21.45■■□□□ 1.02
LINC01220-201ENST00000558575 MON2Q7Z3U7 1717 aa21.44■■□□□ 1.02
LINC01220-201ENST00000558575 TOM1L2Q6ZVM7 507 aa21.44■■□□□ 1.02
LINC01220-201ENST00000558575 PANK3Q9H999 370 aa21.44■■□□□ 1.02
LINC01220-201ENST00000558575 USP31Q70CQ4 1352 aa21.42■■□□□ 1.02
LINC01220-201ENST00000558575 WDR17Q8IZU2 1322 aa21.41■■□□□ 1.02
LINC01220-201ENST00000558575 FYB1O15117 783 aa21.41■■□□□ 1.02
LINC01220-201ENST00000558575 AXIN2Q9Y2T1 843 aa21.4■■□□□ 1.02
LINC01220-201ENST00000558575 ZNF827Q17R98 1081 aa21.39■■□□□ 1.01
LINC01220-201ENST00000558575 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
LINC01220-201ENST00000558575 TNS2Q63HR2 1409 aa21.37■■□□□ 1.01
LINC01220-201ENST00000558575 NSD3Q9BZ95 1437 aa21.37■■□□□ 1.01
LINC01220-201ENST00000558575 ABCC6O95255 1503 aa21.36■■□□□ 1.01
LINC01220-201ENST00000558575 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
LINC01220-201ENST00000558575 CDCA7Q9BWT1 371 aaPredicted RBP21.36■■□□□ 1.01
LINC01220-201ENST00000558575 GGNBP2Q9H3C7 697 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms