RNA–Protein interactions for RNA: ENST00000558445.5

TRPM1-207, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-207ENST00000558445 NF2P35240 595 aa11.99□□□□□ -0.49
TRPM1-207ENST00000558445 CALR3Q96L12 384 aaKnown RBP11.99□□□□□ -0.49
TRPM1-207ENST00000558445 TRIM5Q9C035 493 aa11.99□□□□□ -0.49
TRPM1-207ENST00000558445 WIZO95785 1651 aa11.99□□□□□ -0.49
TRPM1-207ENST00000558445 NBPF8Q3BBV2 869 aa11.99□□□□□ -0.49
TRPM1-207ENST00000558445 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRPM1-207ENST00000558445 CCDC171Q6TFL3 1326 aa11.98□□□□□ -0.49
TRPM1-207ENST00000558445 CCDC183Q5T5S1 534 aa11.98□□□□□ -0.49
TRPM1-207ENST00000558445 KIAA1524Q8TCG1 905 aa11.98□□□□□ -0.49
TRPM1-207ENST00000558445 SMC2O95347 1197 aa11.98□□□□□ -0.49
TRPM1-207ENST00000558445 MICALL1Q8N3F8 863 aa11.98□□□□□ -0.49
TRPM1-207ENST00000558445 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
TRPM1-207ENST00000558445 MMS22LQ6ZRQ5 1243 aa11.98□□□□□ -0.49
TRPM1-207ENST00000558445 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
TRPM1-207ENST00000558445 GAS2L2Q8NHY3 880 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 ATP6V1DQ9Y5K8 247 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 MYOM3Q5VTT5 1437 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 EIF3JO75822 258 aaKnown RBP11.97□□□□□ -0.49
TRPM1-207ENST00000558445 GYS2P54840 703 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 KDM2AQ9Y2K7 1162 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 TRIM66O15016 1216 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 NEBLO76041 1014 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 SLFN5Q08AF3 891 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 FOXD4L6Q3SYB3 417 aaPredicted RBP11.97□□□□□ -0.49
TRPM1-207ENST00000558445 FOXD4L3Q6VB84 417 aaPredicted RBP11.97□□□□□ -0.49
TRPM1-207ENST00000558445 HOMER1Q86YM7 354 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.97□□□□□ -0.49
TRPM1-207ENST00000558445 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 HFM1A2PYH4 1435 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 SEMA3FQ13275 785 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 NBPF11Q86T75 865 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 TMEM63CQ9P1W3 806 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 ADAMTS8Q9UP79 889 aa11.97□□□□□ -0.49
TRPM1-207ENST00000558445 KDM4AO75164 1064 aa11.96□□□□□ -0.49
TRPM1-207ENST00000558445 CCDC192P0DO97 292 aa11.96□□□□□ -0.49
TRPM1-207ENST00000558445 ELF2Q15723 593 aa11.96□□□□□ -0.49
TRPM1-207ENST00000558445 ITPRIPQ8IWB1 547 aa11.96□□□□□ -0.49
TRPM1-207ENST00000558445 NUCKS1Q9H1E3 243 aaKnown RBP11.96□□□□□ -0.49
TRPM1-207ENST00000558445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRPM1-207ENST00000558445 GOLGA6L19H0YKK7 550 aa11.96□□□□□ -0.49
TRPM1-207ENST00000558445 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRPM1-207ENST00000558445 FAM212AQ96EL1 285 aa11.96□□□□□ -0.49
TRPM1-207ENST00000558445 HCLS1P14317 486 aaPredicted RBP11.96□□□□□ -0.5
TRPM1-207ENST00000558445 SRLQ86TD4 932 aa11.96□□□□□ -0.5
TRPM1-207ENST00000558445 TRHP20396 242 aaPredicted RBP11.95□□□□□ -0.5
TRPM1-207ENST00000558445 RNF217Q8TC41 542 aa11.95□□□□□ -0.5
TRPM1-207ENST00000558445 CLEC17AQ6ZS10 378 aa11.95□□□□□ -0.5
TRPM1-207ENST00000558445 FBXO18Q8NFZ0 1043 aa11.95□□□□□ -0.5
TRPM1-207ENST00000558445 KIF27Q86VH2 1401 aa11.95□□□□□ -0.5
TRPM1-207ENST00000558445 SUDS3Q9H7L9 328 aaPredicted RBP11.95□□□□□ -0.5
TRPM1-207ENST00000558445 SETSIPP0DME0 302 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 ANAPC15P60006 121 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 NEMFO60524 1076 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 SLFNL1Q499Z3 407 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 CCP110O43303 1012 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 ERC1Q8IUD2 1116 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 CDC45O75419 566 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
TRPM1-207ENST00000558445 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
TRPM1-207ENST00000558445 POLKQ9UBT6 870 aa11.93□□□□□ -0.5
TRPM1-207ENST00000558445 MKRN1Q9UHC7 482 aaKnown RBP11.93□□□□□ -0.5
TRPM1-207ENST00000558445 NKTRP30414 1462 aaKnown RBP11.93□□□□□ -0.5
TRPM1-207ENST00000558445 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
TRPM1-207ENST00000558445 GORABQ5T7V8 394 aa11.93□□□□□ -0.5
TRPM1-207ENST00000558445 CCDC146Q8IYE0 955 aa11.93□□□□□ -0.5
TRPM1-207ENST00000558445 ST20-MTHFSA0A0A6YYL1 179 aa11.93□□□□□ -0.5
TRPM1-207ENST00000558445 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
TRPM1-207ENST00000558445 IPO7O95373 1038 aaKnown RBP11.93□□□□□ -0.5
TRPM1-207ENST00000558445 ERCC3P19447 782 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 CEP89Q96ST8 783 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 LNPKQ9C0E8 428 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 ZNF215Q9UL58 517 aaPredicted RBP11.92□□□□□ -0.5
TRPM1-207ENST00000558445 DDX19BQ9UMR2 479 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 A0A1B0GUA9 196 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 PYCARDQ9ULZ3 195 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 RAD50Q92878 1312 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 ACTN2P35609 894 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 KMT5BQ4FZB7 885 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 CCDC186Q7Z3E2 898 aa11.92□□□□□ -0.5
TRPM1-207ENST00000558445 TACO1Q9BSH4 297 aaKnown RBP11.92□□□□□ -0.5
TRPM1-207ENST00000558445 APAF1O14727 1248 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 IRX1P78414 480 aaPredicted RBP11.91□□□□□ -0.5
TRPM1-207ENST00000558445 STK26Q9P289 416 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 PTGS1P23219 599 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 OAS2P29728 719 aaKnown RBP11.91□□□□□ -0.5
TRPM1-207ENST00000558445 ARHGAP29Q52LW3 1261 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 FBXO38Q6PIJ6 1188 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 INSRP06213 1382 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 ZKSCAN8Q15776 578 aaPredicted RBP11.91□□□□□ -0.5
TRPM1-207ENST00000558445 EFCAB13Q8IY85 973 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
TRPM1-207ENST00000558445 GPT2Q8TD30 523 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 TIAM1Q13009 1591 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 KIAA0754O94854 1291 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 MCM2P49736 904 aa11.91□□□□□ -0.5
TRPM1-207ENST00000558445 CCAR2Q8N163 923 aaKnown RBP11.91□□□□□ -0.5
TRPM1-207ENST00000558445 CDR1P51861 262 aa11.9□□□□□ -0.5
TRPM1-207ENST00000558445 ANKRD36BQ8N2N9 1353 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms