RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 MRPL58Q14197 206 aaKnown RBP2.28□□□□□ -2.04
CTDSPL2-202ENST00000558373 JMYQ8N9B5 988 aa2.28□□□□□ -2.04
CTDSPL2-202ENST00000558373 CALR3Q96L12 384 aaKnown RBP2.28□□□□□ -2.04
CTDSPL2-202ENST00000558373 ZBTB7BO15156 539 aaPredicted RBP2.28□□□□□ -2.05
CTDSPL2-202ENST00000558373 GCGRP47871 477 aa2.28□□□□□ -2.05
CTDSPL2-202ENST00000558373 SH3BP5LQ7L8J4 393 aa2.28□□□□□ -2.05
CTDSPL2-202ENST00000558373 TMEM134Q9H6X4 195 aa2.28□□□□□ -2.05
CTDSPL2-202ENST00000558373 SLC19A1P41440 591 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 NFATC2IPQ8NCF5 419 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 HMX1Q9NP08 348 aaPredicted RBP2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 FGD1P98174 961 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 SEMA3FQ13275 785 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 MTMR2Q13614 643 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 PODXL2Q9NZ53 605 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 DDX11L8A8MPP1 907 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 NR1I2O75469 434 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 AP1G2O75843 785 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 POLR3EQ9NVU0 708 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 GPSM3Q9Y4H4 160 aa2.27□□□□□ -2.05
CTDSPL2-202ENST00000558373 ST8SIA5O15466 376 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 C4orf48Q5BLP8 95 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 NUDT18Q6ZVK8 323 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 PLEKHM2Q8IWE5 1019 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 PBXIP1Q96AQ6 731 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 SIRT1Q96EB6 747 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 COL17A1Q9UMD9 1497 aaPredicted RBP2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 FDX1P10109 184 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 POU3F3P20264 500 aaPredicted RBP2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 ATP6V1AP38606 617 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 RPIAP49247 311 aa2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 HIRAP54198 1017 aaPredicted RBP2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 TRIM26Q12899 539 aaPredicted RBP2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 RBM19Q9Y4C8 960 aaKnown RBP2.26□□□□□ -2.05
CTDSPL2-202ENST00000558373 LOC105371045A0A1W2PR82 267 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 BRD1O95696 1058 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 SUZ12Q15022 739 aaKnown RBP2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 TAS1R3Q7RTX0 852 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 ARID3AQ99856 593 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 KRTAP4-8Q9BYQ9 185 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 RBM47A0AV96 593 aaKnown RBP2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 ACTN4O43707 911 aaKnown RBP2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 RNF20Q5VTR2 975 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 SMAPO00193 183 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 WFS1O76024 890 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 PTK2Q05397 1052 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 CTC1Q2NKJ3 1217 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 CCDC82Q8N4S0 544 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 CDV3Q9UKY7 258 aaKnown RBP2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 ZNF777Q9ULD5 760 aaPredicted RBP2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 ABL2P42684 1182 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 RAD51AP2Q09MP3 1159 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 NPM2Q86SE8 214 aaKnown RBP2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 TRIM50Q86XT4 487 aa2.25□□□□□ -2.05
CTDSPL2-202ENST00000558373 SIAH2O43255 324 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 FMNL1O95466 1100 aaPredicted RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 HOXB4P17483 251 aaPredicted RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 SWT1Q5T5J6 900 aaKnown RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 BLOC1S3Q6QNY0 202 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 PROCA1Q8NCQ7 364 aaPredicted RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP2.24□□□□□ -2.057e-13■■■■■ 64.1
CTDSPL2-202ENST00000558373 ARID3CA6NKF2 412 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 PPEF1O14829 653 aaPredicted RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 USP17L8P0C7I0 530 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 DSC3Q14574 896 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 METTL16Q86W50 562 aaKnown RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 COL26A1Q96A83 441 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 HOXA2O43364 376 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 TLL1O43897 1013 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 SELPP16109 830 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 MAP7D1Q3KQU3 841 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 ZNF697Q5TEC3 545 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 TMCO4Q5TGY1 634 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 RETREG3Q86VR2 466 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 NPAS4Q8IUM7 802 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 FAM160A2Q8N612 972 aaPredicted RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 CCER1Q8TC90 406 aaPredicted RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 VRTNQ9H8Y1 702 aa2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 GMPR2Q9P2T1 348 aaKnown RBP2.24□□□□□ -2.05
CTDSPL2-202ENST00000558373 NR1H3Q13133 447 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 NBPF14Q5TI25 921 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 LARP1Q6PKG0 1096 aaKnown RBP2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 CLUAP1Q96AJ1 413 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 CFAP99D6REC4 459 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 TERTO14746 1132 aaKnown RBP2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 SMPD1P17405 629 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 NPAS3Q8IXF0 933 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 TRIM47Q96LD4 638 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 MKRN1Q9UHC7 482 aaKnown RBP2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 C6orf229H3BNL8 230 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 ATG7O95352 703 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 ADH1BP00325 375 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 ATP1A2P50993 1020 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 PKDCCQ504Y2 493 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 GMLQ99445 158 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 ESF1Q9H501 851 aaKnown RBP2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 AMOTL2Q9Y2J4 779 aa2.23□□□□□ -2.05
CTDSPL2-202ENST00000558373 S1PR4O95977 384 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 VSIG8P0DPA2 414 aa2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 DMGDHQ9UI17 866 aaKnown RBP2.22□□□□□ -2.05
CTDSPL2-202ENST00000558373 HECW1Q76N89 1606 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms