RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 HAP1P54257 671 aaPredicted RBP10.83□□□□□ -0.68
RTF1-205ENST00000558298 BTG4Q9NY30 223 aa10.83□□□□□ -0.68
RTF1-205ENST00000558298 PARP4Q9UKK3 1724 aaKnown RBP10.83□□□□□ -0.68
RTF1-205ENST00000558298 NSD2O96028 1365 aa10.82□□□□□ -0.68
RTF1-205ENST00000558298 AATKQ6ZMQ8 1374 aa10.82□□□□□ -0.68
RTF1-205ENST00000558298 GCP02774 474 aa10.82□□□□□ -0.68
RTF1-205ENST00000558298 NUTM2GQ5VZR2 741 aa10.82□□□□□ -0.68
RTF1-205ENST00000558298 KCNH5Q8NCM2 988 aa10.82□□□□□ -0.68
RTF1-205ENST00000558298 PRDM11Q9NQV5 511 aa10.82□□□□□ -0.68
RTF1-205ENST00000558298 RGPD5Q99666 1765 aa10.82□□□□□ -0.68
RTF1-205ENST00000558298 KIF24Q5T7B8 1368 aa10.81□□□□□ -0.68
RTF1-205ENST00000558298 SPATA31A1Q5TZJ5 1347 aa10.81□□□□□ -0.68
RTF1-205ENST00000558298 CHRNA2Q15822 529 aa10.8□□□□□ -0.68
RTF1-205ENST00000558298 TMC1Q8TDI8 760 aa10.8□□□□□ -0.68
RTF1-205ENST00000558298 TNS1Q9HBL0 1735 aaKnown RBP10.8□□□□□ -0.68
RTF1-205ENST00000558298 KIF7Q2M1P5 1343 aa10.8□□□□□ -0.68
RTF1-205ENST00000558298 LRRC37A3O60309 1634 aa10.8□□□□□ -0.68
RTF1-205ENST00000558298 RTL1A6NKG5 1358 aa10.79□□□□□ -0.68
RTF1-205ENST00000558298 CCDC7Q96M83 1385 aa10.79□□□□□ -0.68
RTF1-205ENST00000558298 NPC1L1Q9UHC9 1359 aa10.79□□□□□ -0.68
RTF1-205ENST00000558298 PEAK1Q9H792 1746 aa10.79□□□□□ -0.68
RTF1-205ENST00000558298 BLMP54132 1417 aaPredicted RBP10.79□□□□□ -0.68
RTF1-205ENST00000558298 NSD3Q9BZ95 1437 aa10.79□□□□□ -0.68
RTF1-205ENST00000558298 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
RTF1-205ENST00000558298 NLRP6P59044 892 aa10.79□□□□□ -0.68
RTF1-205ENST00000558298 ZC3H6P61129 1189 aaKnown RBP10.79□□□□□ -0.68
RTF1-205ENST00000558298 FKBP8Q14318 412 aa10.78□□□□□ -0.68
RTF1-205ENST00000558298 ARHGEF25Q86VW2 580 aa10.78□□□□□ -0.68
RTF1-205ENST00000558298 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
RTF1-205ENST00000558298 CRB1P82279 1406 aa10.77□□□□□ -0.68
RTF1-205ENST00000558298 SMG6Q86US8 1419 aaKnown RBP10.77□□□□□ -0.68
RTF1-205ENST00000558298 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.69
RTF1-205ENST00000558298 RGPD1P0DJD0 1748 aa10.77□□□□□ -0.69
RTF1-205ENST00000558298 CGNL1Q0VF96 1302 aa10.77□□□□□ -0.69
RTF1-205ENST00000558298 DISP2A7MBM2 1401 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 FYB1O15117 783 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 BARGINQ6ZT62 677 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 NME9Q86XW9 330 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 CARD14Q9BXL6 1004 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 AXIN2Q9Y2T1 843 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 WASHC2AQ641Q2 1341 aa10.76□□□□□ -0.69
RTF1-205ENST00000558298 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
RTF1-205ENST00000558298 LARP1Q6PKG0 1096 aaKnown RBP10.75□□□□□ -0.69
RTF1-205ENST00000558298 PLEKHG2Q9H7P9 1386 aa10.75□□□□□ -0.69
RTF1-205ENST00000558298 MAP2P11137 1827 aaKnown RBP10.74□□□□□ -0.69
RTF1-205ENST00000558298 COG3Q96JB2 828 aa10.74□□□□□ -0.69
RTF1-205ENST00000558298 WDR17Q8IZU2 1322 aa10.74□□□□□ -0.69
RTF1-205ENST00000558298 PER1O15534 1290 aaPredicted RBP10.73□□□□□ -0.69
RTF1-205ENST00000558298 KRT27Q7Z3Y8 459 aa10.73□□□□□ -0.69
RTF1-205ENST00000558298 CCDC125Q86Z20 511 aa10.73□□□□□ -0.69
RTF1-205ENST00000558298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.73□□□□□ -0.69
RTF1-205ENST00000558298 THRAP3Q9Y2W1 955 aaKnown RBP10.73□□□□□ -0.69
RTF1-205ENST00000558298 NCAPD2Q15021 1401 aa10.73□□□□□ -0.69
RTF1-205ENST00000558298 SBF2Q86WG5 1849 aa10.72□□□□□ -0.69
RTF1-205ENST00000558298 TCP11L2Q8N4U5 519 aa10.72□□□□□ -0.69
RTF1-205ENST00000558298 PANK3Q9H999 370 aa10.72□□□□□ -0.69
RTF1-205ENST00000558298 STRN4Q9NRL3 753 aa10.72□□□□□ -0.69
RTF1-205ENST00000558298 CCDC9Q9Y3X0 531 aaKnown RBP10.72□□□□□ -0.69
RTF1-205ENST00000558298 ERBB3P21860 1342 aa10.72□□□□□ -0.69
RTF1-205ENST00000558298 RGPD3A6NKT7 1758 aaPredicted RBP10.72□□□□□ -0.69
RTF1-205ENST00000558298 RGPD4Q7Z3J3 1758 aa10.72□□□□□ -0.69
RTF1-205ENST00000558298 BCL9O00512 1426 aa10.71□□□□□ -0.69
RTF1-205ENST00000558298 FLT4P35916 1363 aa10.71□□□□□ -0.69
RTF1-205ENST00000558298 AMER1Q5JTC6 1135 aaPredicted RBP10.71□□□□□ -0.69
RTF1-205ENST00000558298 RREB1Q92766 1687 aa10.71□□□□□ -0.69
RTF1-205ENST00000558298 ANP32CO43423 234 aa10.7□□□□□ -0.7
RTF1-205ENST00000558298 SHANK3Q9BYB0 1731 aa10.7□□□□□ -0.7
RTF1-205ENST00000558298 INSRP06213 1382 aa10.69□□□□□ -0.7
RTF1-205ENST00000558298 MAP3K19Q56UN5 1328 aa10.69□□□□□ -0.7
RTF1-205ENST00000558298 IP6K1Q92551 441 aa10.69□□□□□ -0.7
RTF1-205ENST00000558298 RGPD2P0DJD1 1756 aa10.69□□□□□ -0.7
RTF1-205ENST00000558298 TNS2Q63HR2 1409 aa10.68□□□□□ -0.7
RTF1-205ENST00000558298 CARD10Q9BWT7 1032 aa10.68□□□□□ -0.7
RTF1-205ENST00000558298 GGNBP2Q9H3C7 697 aa10.68□□□□□ -0.7
RTF1-205ENST00000558298 EVA1CP58658 441 aa10.67□□□□□ -0.7
RTF1-205ENST00000558298 RTL5Q5HYW3 569 aaPredicted RBP10.67□□□□□ -0.7
RTF1-205ENST00000558298 CDCA7Q9BWT1 371 aaPredicted RBP10.67□□□□□ -0.7
RTF1-205ENST00000558298 USP35Q9P2H5 1018 aa10.67□□□□□ -0.7
RTF1-205ENST00000558298 KNSTRNQ9Y448 316 aa10.67□□□□□ -0.7
RTF1-205ENST00000558298 NUP188Q5SRE5 1749 aa10.67□□□□□ -0.7
RTF1-205ENST00000558298 OVOS2A0A0G2JMS6 1433 aa10.67□□□□□ -0.7
RTF1-205ENST00000558298 SOX12O15370 315 aa10.66□□□□□ -0.7
RTF1-205ENST00000558298 HOXC9P31274 260 aa10.66□□□□□ -0.7
RTF1-205ENST00000558298 DEKP35659 375 aaKnown RBP10.66□□□□□ -0.7
RTF1-205ENST00000558298 FAM182BQ5T319 152 aa10.66□□□□□ -0.7
RTF1-205ENST00000558298 PKD1L3Q7Z443 1732 aa10.66□□□□□ -0.7
RTF1-205ENST00000558298 NHSQ6T4R5 1651 aa10.66□□□□□ -0.7
RTF1-205ENST00000558298 TOM1L2Q6ZVM7 507 aa10.65□□□□□ -0.7
RTF1-205ENST00000558298 PPP4R2Q9NY27 417 aa10.65□□□□□ -0.7
RTF1-205ENST00000558298 A0A0G2JS52 829 aa10.64□□□□□ -0.71
RTF1-205ENST00000558298 FAM196AQ6ZSG2 479 aa10.64□□□□□ -0.71
RTF1-205ENST00000558298 DEFB132Q7Z7B7 95 aa10.64□□□□□ -0.71
RTF1-205ENST00000558298 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
RTF1-205ENST00000558298 FBLN1P23142 703 aa10.63□□□□□ -0.71
RTF1-205ENST00000558298 ANKRD24Q8TF21 1146 aa10.63□□□□□ -0.71
RTF1-205ENST00000558298 POLR3GLQ9BT43 218 aa10.63□□□□□ -0.71
RTF1-205ENST00000558298 POLKQ9UBT6 870 aa10.63□□□□□ -0.71
RTF1-205ENST00000558298 PARD3Q8TEW0 1356 aa10.63□□□□□ -0.71
RTF1-205ENST00000558298 MEGF6O75095 1541 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms