RNA–Protein interactions for RNA: ENST00000558139.1

LHX4-202, Transcript of LIM homeobox 4, humanhuman

TSL 3

Gene LHX4, Length 721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4-202ENST00000558139 CDCA7Q9BWT1 371 aaPredicted RBP26.02■■□□□ 1.76
LHX4-202ENST00000558139 ACEP12821 1306 aa26.02■■□□□ 1.76
LHX4-202ENST00000558139 POLR3AO14802 1390 aaPredicted RBP26■■□□□ 1.75
LHX4-202ENST00000558139 ZBTB7CA1YPR0 619 aa25.99■■□□□ 1.75
LHX4-202ENST00000558139 KLHL34Q8N239 644 aa25.99■■□□□ 1.75
LHX4-202ENST00000558139 SBF2Q86WG5 1849 aa25.99■■□□□ 1.75
LHX4-202ENST00000558139 ADGRB1O14514 1584 aa25.99■■□□□ 1.75
LHX4-202ENST00000558139 AATKQ6ZMQ8 1374 aa25.98■■□□□ 1.75
LHX4-202ENST00000558139 CCDC61Q9Y6R9 512 aa25.98■■□□□ 1.75
LHX4-202ENST00000558139 PLEKHG3A1L390 1219 aa25.96■■□□□ 1.75
LHX4-202ENST00000558139 CDK19Q9BWU1 502 aa25.96■■□□□ 1.75
LHX4-202ENST00000558139 HSPA6P17066 643 aa25.95■■□□□ 1.74
LHX4-202ENST00000558139 LRRC37A3O60309 1634 aa25.95■■□□□ 1.74
LHX4-202ENST00000558139 GRIN3BO60391 1043 aa25.94■■□□□ 1.74
LHX4-202ENST00000558139 POLD1P28340 1107 aa25.94■■□□□ 1.74
LHX4-202ENST00000558139 ITSN1Q15811 1721 aa25.92■■□□□ 1.74
LHX4-202ENST00000558139 EXOC5O00471 708 aa25.92■■□□□ 1.74
LHX4-202ENST00000558139 GOLGB1Q14789 3259 aaKnown RBP25.91■■□□□ 1.74
LHX4-202ENST00000558139 SLC16A10Q8TF71 515 aa25.9■■□□□ 1.74
LHX4-202ENST00000558139 SHANK3Q9BYB0 1731 aa25.9■■□□□ 1.74
LHX4-202ENST00000558139 WDR17Q8IZU2 1322 aa25.89■■□□□ 1.74
LHX4-202ENST00000558139 GPBP1L1Q9HC44 474 aaPredicted RBP25.88■■□□□ 1.73
LHX4-202ENST00000558139 NLRP6P59044 892 aa25.85■■□□□ 1.73
LHX4-202ENST00000558139 ZNF827Q17R98 1081 aa25.85■■□□□ 1.73
LHX4-202ENST00000558139 NLGN2Q8NFZ4 835 aa25.85■■□□□ 1.73
LHX4-202ENST00000558139 KDM2AQ9Y2K7 1162 aa25.85■■□□□ 1.73
LHX4-202ENST00000558139 ATP10DQ9P241 1426 aa25.85■■□□□ 1.73
LHX4-202ENST00000558139 CARD10Q9BWT7 1032 aa25.84■■□□□ 1.73
LHX4-202ENST00000558139 AXIN2Q9Y2T1 843 aa25.84■■□□□ 1.73
LHX4-202ENST00000558139 CSB-PGBD3P0DP91 1061 aa25.83■■□□□ 1.73
LHX4-202ENST00000558139 YBX3P16989 372 aaKnown RBP eCLIP25.82■■□□□ 1.72
LHX4-202ENST00000558139 ACSBG1Q96GR2 724 aa25.81■■□□□ 1.72
LHX4-202ENST00000558139 BRD4O60885 1362 aaPredicted RBP25.81■■□□□ 1.72
LHX4-202ENST00000558139 DCAF11Q8TEB1 546 aa25.8■■□□□ 1.72
LHX4-202ENST00000558139 STAC3Q96MF2 364 aa25.78■■□□□ 1.72
LHX4-202ENST00000558139 AKAP12Q02952 1782 aa25.77■■□□□ 1.72
LHX4-202ENST00000558139 AKT1S1Q96B36 256 aa25.77■■□□□ 1.72
LHX4-202ENST00000558139 LRRC4BQ9NT99 713 aa25.77■■□□□ 1.72
LHX4-202ENST00000558139 PAPPAQ13219 1627 aa25.74■■□□□ 1.71
LHX4-202ENST00000558139 USP6P35125 1406 aa25.74■■□□□ 1.71
LHX4-202ENST00000558139 ZNF526Q8TF50 670 aaPredicted RBP25.74■■□□□ 1.71
LHX4-202ENST00000558139 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
LHX4-202ENST00000558139 SRPK2P78362 688 aaKnown RBP25.73■■□□□ 1.71
LHX4-202ENST00000558139 TFCP2L1Q9NZI6 479 aa25.73■■□□□ 1.71
LHX4-202ENST00000558139 TOPAZ1Q8N9V7 1692 aa25.73■■□□□ 1.71
LHX4-202ENST00000558139 PPIP5K1Q6PFW1 1433 aa25.72■■□□□ 1.71
LHX4-202ENST00000558139 PNPLA7Q6ZV29 1317 aa25.72■■□□□ 1.71
LHX4-202ENST00000558139 SLC27A3Q5K4L6 730 aa25.72■■□□□ 1.71
LHX4-202ENST00000558139 ARHGEF25Q86VW2 580 aa25.72■■□□□ 1.71
LHX4-202ENST00000558139 TNS2Q63HR2 1409 aa25.71■■□□□ 1.71
LHX4-202ENST00000558139 SLIT3O75094 1523 aa25.7■■□□□ 1.7
LHX4-202ENST00000558139 KCNH5Q8NCM2 988 aa25.7■■□□□ 1.7
LHX4-202ENST00000558139 CPSF1Q10570 1443 aaKnown RBP25.69■■□□□ 1.7
LHX4-202ENST00000558139 WNK3Q9BYP7 1800 aa25.68■■□□□ 1.7
LHX4-202ENST00000558139 APLP1P51693 650 aa25.68■■□□□ 1.7
LHX4-202ENST00000558139 NHSQ6T4R5 1651 aa25.68■■□□□ 1.7
LHX4-202ENST00000558139 ARHGEF28Q8N1W1 1705 aaKnown RBP25.67■■□□□ 1.7
LHX4-202ENST00000558139 COL18A1P39060 1754 aa25.66■■□□□ 1.7
LHX4-202ENST00000558139 CABP2Q9NPB3 220 aa25.65■■□□□ 1.7
LHX4-202ENST00000558139 CABP1Q9NZU7 370 aa25.65■■□□□ 1.7
LHX4-202ENST00000558139 ADCY9O60503 1353 aa25.65■■□□□ 1.7
LHX4-202ENST00000558139 SOX12O15370 315 aa25.64■■□□□ 1.7
LHX4-202ENST00000558139 MSH5O43196 834 aa25.61■■□□□ 1.69
LHX4-202ENST00000558139 IL2RBP14784 551 aa25.61■■□□□ 1.69
LHX4-202ENST00000558139 DNAJC5GQ8N7S2 189 aa25.61■■□□□ 1.69
LHX4-202ENST00000558139 KIF3CO14782 793 aa25.6■■□□□ 1.69
LHX4-202ENST00000558139 CD2APQ9Y5K6 639 aa25.6■■□□□ 1.69
LHX4-202ENST00000558139 COL24A1Q17RW2 1714 aa25.6■■□□□ 1.69
LHX4-202ENST00000558139 ABCC6O95255 1503 aa25.59■■□□□ 1.69
LHX4-202ENST00000558139 CAPN15O75808 1086 aa25.59■■□□□ 1.69
LHX4-202ENST00000558139 NLRP2Q9NX02 1062 aa25.59■■□□□ 1.69
LHX4-202ENST00000558139 TRPM1Q7Z4N2 1603 aa25.57■■□□□ 1.68
LHX4-202ENST00000558139 KCNQ4P56696 695 aa25.56■■□□□ 1.68
LHX4-202ENST00000558139 BTAF1O14981 1849 aa25.56■■□□□ 1.68
LHX4-202ENST00000558139 COL13A1Q5TAT6 717 aaPredicted RBP25.55■■□□□ 1.68
LHX4-202ENST00000558139 QSER1Q2KHR3 1735 aa25.54■■□□□ 1.68
LHX4-202ENST00000558139 COL23A1Q86Y22 540 aaPredicted RBP25.53■■□□□ 1.68
LHX4-202ENST00000558139 ZNF692Q9BU19 519 aaPredicted RBP25.52■■□□□ 1.68
LHX4-202ENST00000558139 TTC21BQ7Z4L5 1316 aa25.52■■□□□ 1.68
LHX4-202ENST00000558139 CENPJQ9HC77 1338 aaPredicted RBP25.52■■□□□ 1.68
LHX4-202ENST00000558139 TOMM70O94826 608 aa25.51■■□□□ 1.67
LHX4-202ENST00000558139 MSL1Q68DK7 614 aa25.51■■□□□ 1.67
LHX4-202ENST00000558139 ERBB3P21860 1342 aa25.5■■□□□ 1.67
LHX4-202ENST00000558139 PRELPP51888 382 aa25.5■■□□□ 1.67
LHX4-202ENST00000558139 SYTL4Q96C24 671 aaPredicted RBP25.5■■□□□ 1.67
LHX4-202ENST00000558139 KAT6BQ8WYB5 2073 aa25.49■■□□□ 1.67
LHX4-202ENST00000558139 TNS4Q8IZW8 715 aa25.49■■□□□ 1.67
LHX4-202ENST00000558139 DDX54Q8TDD1 881 aaKnown RBP25.49■■□□□ 1.67
LHX4-202ENST00000558139 PIK3C2AO00443 1686 aa25.48■■□□□ 1.67
LHX4-202ENST00000558139 CCNL1Q9UK58 526 aaPredicted RBP25.48■■□□□ 1.67
LHX4-202ENST00000558139 RGPD5Q99666 1765 aa25.47■■□□□ 1.67
LHX4-202ENST00000558139 TTC21AQ8NDW8 1320 aa25.47■■□□□ 1.67
LHX4-202ENST00000558139 PRIM1P49642 420 aaKnown RBP25.46■■□□□ 1.67
LHX4-202ENST00000558139 NBPF1Q3BBV0 1214 aa25.44■■□□□ 1.66
LHX4-202ENST00000558139 FLAD1Q8NFF5 587 aa25.42■■□□□ 1.66
LHX4-202ENST00000558139 ANKRD24Q8TF21 1146 aa25.42■■□□□ 1.66
LHX4-202ENST00000558139 KLRG1Q96E93 195 aa25.42■■□□□ 1.66
LHX4-202ENST00000558139 NFAT5O94916 1531 aa25.42■■□□□ 1.66
LHX4-202ENST00000558139 IGSF1Q8N6C5 1336 aa25.41■■□□□ 1.66
LHX4-202ENST00000558139 JMYQ8N9B5 988 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms