RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
SNRPA1-204ENST00000558020 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
SNRPA1-204ENST00000558020 TRIM26Q12899 539 aaPredicted RBP19.23■□□□□ 0.67
SNRPA1-204ENST00000558020 NBPF14Q5TI25 921 aa19.23■□□□□ 0.67
SNRPA1-204ENST00000558020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNRPA1-204ENST00000558020 PUS7Q96PZ0 661 aaKnown RBP19.23■□□□□ 0.67
SNRPA1-204ENST00000558020 AXIN2Q9Y2T1 843 aa19.23■□□□□ 0.67
SNRPA1-204ENST00000558020 AKAP12Q02952 1782 aa19.21■□□□□ 0.67
SNRPA1-204ENST00000558020 CARD10Q9BWT7 1032 aa19.21■□□□□ 0.67
SNRPA1-204ENST00000558020 TNS1Q9HBL0 1735 aaKnown RBP19.21■□□□□ 0.67
SNRPA1-204ENST00000558020 PARP4Q9UKK3 1724 aaKnown RBP19.2■□□□□ 0.66
SNRPA1-204ENST00000558020 OVOS2A0A0G2JMS6 1433 aa19.19■□□□□ 0.66
SNRPA1-204ENST00000558020 OVOS2A0A0J9YW53 1432 aa19.19■□□□□ 0.66
SNRPA1-204ENST00000558020 OVOS2Q6IE36 1432 aa19.19■□□□□ 0.66
SNRPA1-204ENST00000558020 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
SNRPA1-204ENST00000558020 USP31Q70CQ4 1352 aa19.18■□□□□ 0.66
SNRPA1-204ENST00000558020 COL18A1P39060 1754 aa19.17■□□□□ 0.66
SNRPA1-204ENST00000558020 EXOC5O00471 708 aa19.17■□□□□ 0.66
SNRPA1-204ENST00000558020 LRP5O75197 1615 aa19.17■□□□□ 0.66
SNRPA1-204ENST00000558020 BCL11BQ9C0K0 894 aaPredicted RBP19.16■□□□□ 0.66
SNRPA1-204ENST00000558020 PLSCR1O15162 318 aa19.15■□□□□ 0.66
SNRPA1-204ENST00000558020 NME9Q86XW9 330 aa19.15■□□□□ 0.66
SNRPA1-204ENST00000558020 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
SNRPA1-204ENST00000558020 MON2Q7Z3U7 1717 aa19.14■□□□□ 0.66
SNRPA1-204ENST00000558020 ST20-MTHFSA0A0A6YYL1 179 aa19.14■□□□□ 0.65
SNRPA1-204ENST00000558020 EDC4Q6P2E9 1401 aaKnown RBP19.14■□□□□ 0.65
SNRPA1-204ENST00000558020 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
SNRPA1-204ENST00000558020 NFAT5O94916 1531 aa19.13■□□□□ 0.65
SNRPA1-204ENST00000558020 ABCC6O95255 1503 aa19.13■□□□□ 0.65
SNRPA1-204ENST00000558020 MARCH10Q8NA82 808 aaPredicted RBP19.12■□□□□ 0.65
SNRPA1-204ENST00000558020 NLRP2Q9NX02 1062 aa19.12■□□□□ 0.65
SNRPA1-204ENST00000558020 CD163L1Q9NR16 1453 aa19.11■□□□□ 0.65
SNRPA1-204ENST00000558020 RGPD5Q99666 1765 aa19.11■□□□□ 0.65
SNRPA1-204ENST00000558020 TESK2Q96S53 571 aa19.1■□□□□ 0.65
SNRPA1-204ENST00000558020 BCL9O00512 1426 aa19.09■□□□□ 0.65
SNRPA1-204ENST00000558020 A0A1W2PP64 1363 aa19.09■□□□□ 0.65
SNRPA1-204ENST00000558020 LRRC37A3O60309 1634 aa19.09■□□□□ 0.65
SNRPA1-204ENST00000558020 ERBB3P21860 1342 aa19.08■□□□□ 0.65
SNRPA1-204ENST00000558020 ANKRD24Q8TF21 1146 aa19.08■□□□□ 0.64
SNRPA1-204ENST00000558020 COG3Q96JB2 828 aa19.08■□□□□ 0.64
SNRPA1-204ENST00000558020 PEAK1Q9H792 1746 aa19.08■□□□□ 0.64
SNRPA1-204ENST00000558020 IL2RBP14784 551 aa19.07■□□□□ 0.64
SNRPA1-204ENST00000558020 TMF1P82094 1093 aa19.07■□□□□ 0.64
SNRPA1-204ENST00000558020 RREB1Q92766 1687 aa19.06■□□□□ 0.64
SNRPA1-204ENST00000558020 CDCA8Q53HL2 280 aa19.06■□□□□ 0.64
SNRPA1-204ENST00000558020 USP54Q70EL1 1684 aa19.05■□□□□ 0.64
SNRPA1-204ENST00000558020 SBF2Q86WG5 1849 aa19.05■□□□□ 0.64
SNRPA1-204ENST00000558020 IP6K1Q92551 441 aa19.05■□□□□ 0.64
SNRPA1-204ENST00000558020 SPON1Q9HCB6 807 aa19.05■□□□□ 0.64
SNRPA1-204ENST00000558020 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
SNRPA1-204ENST00000558020 TIMELESSQ9UNS1 1208 aa19.04■□□□□ 0.64
SNRPA1-204ENST00000558020 WNK3Q9BYP7 1800 aa19.04■□□□□ 0.64
SNRPA1-204ENST00000558020 PPP1R1BQ9UD71 204 aaPredicted RBP19.03■□□□□ 0.64
SNRPA1-204ENST00000558020 LTN1O94822 1766 aa19.03■□□□□ 0.64
SNRPA1-204ENST00000558020 TNS2Q63HR2 1409 aa19.02■□□□□ 0.64
SNRPA1-204ENST00000558020 RGPD3A6NKT7 1758 aaPredicted RBP19.02■□□□□ 0.64
SNRPA1-204ENST00000558020 RGPD4Q7Z3J3 1758 aa19.02■□□□□ 0.64
SNRPA1-204ENST00000558020 KCNQ2O43526 872 aa19.02■□□□□ 0.64
SNRPA1-204ENST00000558020 AMPHP49418 695 aa19.02■□□□□ 0.64
SNRPA1-204ENST00000558020 PTF1AQ7RTS3 328 aa19.02■□□□□ 0.64
SNRPA1-204ENST00000558020 TXNRD1Q16881 649 aa19■□□□□ 0.63
SNRPA1-204ENST00000558020 PROM2Q8N271 834 aa19■□□□□ 0.63
SNRPA1-204ENST00000558020 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
SNRPA1-204ENST00000558020 ANKRD36BQ8N2N9 1353 aa19■□□□□ 0.63
SNRPA1-204ENST00000558020 USP47Q96K76 1375 aa19■□□□□ 0.63
SNRPA1-204ENST00000558020 DCAF8L1A6NGE4 600 aa18.99■□□□□ 0.63
SNRPA1-204ENST00000558020 STK32BQ9NY57 414 aa18.99■□□□□ 0.63
SNRPA1-204ENST00000558020 MAP3K19Q56UN5 1328 aa18.98■□□□□ 0.63
SNRPA1-204ENST00000558020 ACSBG1Q96GR2 724 aa18.97■□□□□ 0.63
SNRPA1-204ENST00000558020 HOXC9P31274 260 aa18.96■□□□□ 0.63
SNRPA1-204ENST00000558020 DDX54Q8TDD1 881 aaKnown RBP18.96■□□□□ 0.63
SNRPA1-204ENST00000558020 CLSPNQ9HAW4 1339 aa18.96■□□□□ 0.63
SNRPA1-204ENST00000558020 FYB1O15117 783 aa18.95■□□□□ 0.62
SNRPA1-204ENST00000558020 SLC15A2Q16348 729 aa18.94■□□□□ 0.62
SNRPA1-204ENST00000558020 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
SNRPA1-204ENST00000558020 ANO8Q9HCE9 1232 aaPredicted RBP18.94■□□□□ 0.62
SNRPA1-204ENST00000558020 GGNBP2Q9H3C7 697 aa18.93■□□□□ 0.62
SNRPA1-204ENST00000558020 KAT6BQ8WYB5 2073 aa18.93■□□□□ 0.62
SNRPA1-204ENST00000558020 FAM208AQ9UK61 1670 aaKnown RBP18.92■□□□□ 0.62
SNRPA1-204ENST00000558020 FBLN1P23142 703 aa18.91■□□□□ 0.62
SNRPA1-204ENST00000558020 ZCRB1Q8TBF4 217 aaKnown RBP18.91■□□□□ 0.62
SNRPA1-204ENST00000558020 RTL1A6NKG5 1358 aa18.91■□□□□ 0.62
SNRPA1-204ENST00000558020 NHSQ6T4R5 1651 aa18.9■□□□□ 0.62
SNRPA1-204ENST00000558020 RRS1Q15050 365 aaKnown RBP18.9■□□□□ 0.62
SNRPA1-204ENST00000558020 CGNL1Q0VF96 1302 aa18.9■□□□□ 0.62
SNRPA1-204ENST00000558020 SMG6Q86US8 1419 aaKnown RBP18.9■□□□□ 0.62
SNRPA1-204ENST00000558020 ZBTB7AO95365 584 aa18.89■□□□□ 0.61
SNRPA1-204ENST00000558020 RAPGEF4Q8WZA2 1011 aa18.89■□□□□ 0.61
SNRPA1-204ENST00000558020 SLC27A3Q5K4L6 730 aa18.88■□□□□ 0.61
SNRPA1-204ENST00000558020 SYTL4Q96C24 671 aaPredicted RBP18.88■□□□□ 0.61
SNRPA1-204ENST00000558020 PDGFDQ9GZP0 370 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-204ENST00000558020 MTFR1LQ9H019 292 aa18.87■□□□□ 0.61
SNRPA1-204ENST00000558020 ATF5Q9Y2D1 282 aaPredicted RBP18.87■□□□□ 0.61
SNRPA1-204ENST00000558020 KIF24Q5T7B8 1368 aa18.86■□□□□ 0.61
SNRPA1-204ENST00000558020 PRIM1P49642 420 aaKnown RBP18.86■□□□□ 0.61
SNRPA1-204ENST00000558020 NBPF6Q5VWK0 638 aa18.86■□□□□ 0.61
SNRPA1-204ENST00000558020 NBPF4Q96M43 638 aa18.86■□□□□ 0.61
SNRPA1-204ENST00000558020 TATP17735 454 aaPredicted RBP18.85■□□□□ 0.61
SNRPA1-204ENST00000558020 HMGB2P26583 209 aaKnown RBP18.85■□□□□ 0.61
SNRPA1-204ENST00000558020 INSRP06213 1382 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms