RNA–Protein interactions for RNA: ENST00000557978.6

PBX4-202, Transcript of PBX homeobox 4, humanhuman

TSL 1 (best)

Gene PBX4, Length 1,416 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX4-202ENST00000557978 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
PBX4-202ENST00000557978 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
PBX4-202ENST00000557978 PER1O15534 1290 aaPredicted RBP22.91■■□□□ 1.26
PBX4-202ENST00000557978 STRN4Q9NRL3 753 aa22.91■■□□□ 1.26
PBX4-202ENST00000557978 COL5A2P05997 1499 aaPredicted RBP22.89■■□□□ 1.26
PBX4-202ENST00000557978 GLI3P10071 1580 aa22.89■■□□□ 1.25
PBX4-202ENST00000557978 CDK12Q9NYV4 1490 aaPredicted RBP22.89■■□□□ 1.25
PBX4-202ENST00000557978 ILDR2Q71H61 639 aa22.88■■□□□ 1.25
PBX4-202ENST00000557978 AXIN2Q9Y2T1 843 aa22.88■■□□□ 1.25
PBX4-202ENST00000557978 FAM208AQ9UK61 1670 aaKnown RBP22.86■■□□□ 1.25
PBX4-202ENST00000557978 AMPHP49418 695 aa22.86■■□□□ 1.25
PBX4-202ENST00000557978 AMER1Q5JTC6 1135 aaPredicted RBP22.86■■□□□ 1.25
PBX4-202ENST00000557978 MAP3K19Q56UN5 1328 aa22.86■■□□□ 1.25
PBX4-202ENST00000557978 BLMP54132 1417 aaPredicted RBP22.86■■□□□ 1.25
PBX4-202ENST00000557978 FBLN1P23142 703 aa22.85■■□□□ 1.25
PBX4-202ENST00000557978 MORC1Q86VD1 984 aa22.85■■□□□ 1.25
PBX4-202ENST00000557978 IP6K1Q92551 441 aa22.85■■□□□ 1.25
PBX4-202ENST00000557978 SPATA31A5Q5VU36 1347 aa22.85■■□□□ 1.25
PBX4-202ENST00000557978 SPATA31A7Q8IWB4 1347 aa22.85■■□□□ 1.25
PBX4-202ENST00000557978 RTL1A6NKG5 1358 aa22.85■■□□□ 1.25
PBX4-202ENST00000557978 KIF24Q5T7B8 1368 aa22.85■■□□□ 1.25
PBX4-202ENST00000557978 RRS1Q15050 365 aaKnown RBP22.84■■□□□ 1.25
PBX4-202ENST00000557978 LARP1Q6PKG0 1096 aaKnown RBP22.83■■□□□ 1.25
PBX4-202ENST00000557978 WDR17Q8IZU2 1322 aa22.83■■□□□ 1.25
PBX4-202ENST00000557978 NPC1L1Q9UHC9 1359 aa22.83■■□□□ 1.25
PBX4-202ENST00000557978 CRB1P82279 1406 aa22.83■■□□□ 1.25
PBX4-202ENST00000557978 SPATA31A1Q5TZJ5 1347 aa22.82■■□□□ 1.24
PBX4-202ENST00000557978 BRWD3Q6RI45 1802 aa22.82■■□□□ 1.24
PBX4-202ENST00000557978 CSB-PGBD3P0DP91 1061 aa22.82■■□□□ 1.24
PBX4-202ENST00000557978 HOXC9P31274 260 aa22.82■■□□□ 1.24
PBX4-202ENST00000557978 TOM1L2Q6ZVM7 507 aa22.82■■□□□ 1.24
PBX4-202ENST00000557978 PEAK1Q9H792 1746 aa22.81■■□□□ 1.24
PBX4-202ENST00000557978 ERBB3P21860 1342 aa22.81■■□□□ 1.24
PBX4-202ENST00000557978 WNK3Q9BYP7 1800 aa22.8■■□□□ 1.24
PBX4-202ENST00000557978 RGPD2P0DJD1 1756 aa22.8■■□□□ 1.24
PBX4-202ENST00000557978 FLT4P35916 1363 aa22.8■■□□□ 1.24
PBX4-202ENST00000557978 ONECUT3O60422 494 aaPredicted RBP22.8■■□□□ 1.24
PBX4-202ENST00000557978 TNNT2P45379 298 aaPredicted RBP22.8■■□□□ 1.24
PBX4-202ENST00000557978 USP35Q9P2H5 1018 aa22.8■■□□□ 1.24
PBX4-202ENST00000557978 THRAP3Q9Y2W1 955 aaKnown RBP22.8■■□□□ 1.24
PBX4-202ENST00000557978 RGS12O14924 1447 aa22.79■■□□□ 1.24
PBX4-202ENST00000557978 CC2D1BQ5T0F9 858 aaKnown RBP22.79■■□□□ 1.24
PBX4-202ENST00000557978 ANKRD24Q8TF21 1146 aa22.79■■□□□ 1.24
PBX4-202ENST00000557978 TCP11L2Q8N4U5 519 aa22.78■■□□□ 1.24
PBX4-202ENST00000557978 FAM98CQ17RN3 349 aaKnown RBP22.77■■□□□ 1.24
PBX4-202ENST00000557978 EMILIN1Q9Y6C2 1016 aa22.77■■□□□ 1.24
PBX4-202ENST00000557978 PPM1GO15355 546 aaPredicted RBP22.76■■□□□ 1.23
PBX4-202ENST00000557978 BARGINQ6ZT62 677 aa22.76■■□□□ 1.23
PBX4-202ENST00000557978 CARD10Q9BWT7 1032 aa22.76■■□□□ 1.23
PBX4-202ENST00000557978 POLKQ9UBT6 870 aa22.76■■□□□ 1.23
PBX4-202ENST00000557978 SMG6Q86US8 1419 aaKnown RBP22.76■■□□□ 1.23
PBX4-202ENST00000557978 INSRP06213 1382 aa22.76■■□□□ 1.23
PBX4-202ENST00000557978 THSD7AQ9UPZ6 1657 aa22.75■■□□□ 1.23
PBX4-202ENST00000557978 DDX10Q13206 875 aaKnown RBP22.75■■□□□ 1.23
PBX4-202ENST00000557978 A0A0G2JS52 829 aa22.74■■□□□ 1.23
PBX4-202ENST00000557978 ZNF316A6NFI3 1004 aaPredicted RBP22.74■■□□□ 1.23
PBX4-202ENST00000557978 MYT1Q01538 1121 aa22.74■■□□□ 1.23
PBX4-202ENST00000557978 SEPT12Q8IYM1 358 aa22.74■■□□□ 1.23
PBX4-202ENST00000557978 PARP4Q9UKK3 1724 aaKnown RBP22.74■■□□□ 1.23
PBX4-202ENST00000557978 HSP90AB2PQ58FF8 381 aa22.74■■□□□ 1.23
PBX4-202ENST00000557978 LTV1Q96GA3 475 aaPredicted RBP22.74■■□□□ 1.23
PBX4-202ENST00000557978 NLRP2Q9NX02 1062 aa22.74■■□□□ 1.23
PBX4-202ENST00000557978 CNGB1Q14028 1251 aaPredicted RBP22.72■■□□□ 1.23
PBX4-202ENST00000557978 CDCA7Q9BWT1 371 aaPredicted RBP22.71■■□□□ 1.23
PBX4-202ENST00000557978 EP400Q96L91 3159 aa22.66■■□□□ 1.22
PBX4-202ENST00000557978 KRT27Q7Z3Y8 459 aa22.65■■□□□ 1.22
PBX4-202ENST00000557978 LRRC37A3O60309 1634 aa22.65■■□□□ 1.22
PBX4-202ENST00000557978 MTHFSP49914 203 aa22.65■■□□□ 1.22
PBX4-202ENST00000557978 KAT6BQ8WYB5 2073 aa22.65■■□□□ 1.22
PBX4-202ENST00000557978 SOCS7O14512 581 aa22.64■■□□□ 1.21
PBX4-202ENST00000557978 IL2RBP14784 551 aa22.64■■□□□ 1.21
PBX4-202ENST00000557978 NBPF6Q5VWK0 638 aa22.64■■□□□ 1.21
PBX4-202ENST00000557978 NBPF4Q96M43 638 aa22.64■■□□□ 1.21
PBX4-202ENST00000557978 PDE3BQ13370 1112 aa22.63■■□□□ 1.21
PBX4-202ENST00000557978 DDB1Q16531 1140 aa22.63■■□□□ 1.21
PBX4-202ENST00000557978 DISP2A7MBM2 1401 aa22.62■■□□□ 1.21
PBX4-202ENST00000557978 EIF4A2Q14240 407 aaKnown RBP22.61■■□□□ 1.21
PBX4-202ENST00000557978 EXOC5O00471 708 aa22.6■■□□□ 1.21
PBX4-202ENST00000557978 PARD3Q8TEW0 1356 aa22.59■■□□□ 1.21
PBX4-202ENST00000557978 PPP2R1AP30153 589 aa22.57■■□□□ 1.2
PBX4-202ENST00000557978 RALBP1Q15311 655 aa22.57■■□□□ 1.2
PBX4-202ENST00000557978 RAPGEF4Q8WZA2 1011 aa22.57■■□□□ 1.2
PBX4-202ENST00000557978 EYA1Q99502 592 aa22.57■■□□□ 1.2
PBX4-202ENST00000557978 SBF2Q86WG5 1849 aa22.57■■□□□ 1.2
PBX4-202ENST00000557978 USHBP1Q8N6Y0 703 aa22.57■■□□□ 1.2
PBX4-202ENST00000557978 RGPD1P0DJD0 1748 aa22.56■■□□□ 1.2
PBX4-202ENST00000557978 NCAPD2Q15021 1401 aa22.56■■□□□ 1.2
PBX4-202ENST00000557978 CFAP53Q96M91 514 aa22.56■■□□□ 1.2
PBX4-202ENST00000557978 TNS2Q63HR2 1409 aa22.55■■□□□ 1.2
PBX4-202ENST00000557978 DIAPH1O60610 1272 aaKnown RBP22.55■■□□□ 1.2
PBX4-202ENST00000557978 TATP17735 454 aaPredicted RBP22.55■■□□□ 1.2
PBX4-202ENST00000557978 IGSF1Q8N6C5 1336 aa22.54■■□□□ 1.2
PBX4-202ENST00000557978 IL13P35225 146 aa22.54■■□□□ 1.2
PBX4-202ENST00000557978 SHANK3Q9BYB0 1731 aa22.54■■□□□ 1.2
PBX4-202ENST00000557978 FAM196AQ6ZSG2 479 aa22.53■■□□□ 1.2
PBX4-202ENST00000557978 MEGF6O75095 1541 aa22.52■■□□□ 1.2
PBX4-202ENST00000557978 OVOS2A0A0G2JMS6 1433 aa22.52■■□□□ 1.2
PBX4-202ENST00000557978 PKD1L3Q7Z443 1732 aa22.52■■□□□ 1.2
PBX4-202ENST00000557978 FAM182BQ5T319 152 aa22.51■■□□□ 1.19
PBX4-202ENST00000557978 CCDC125Q86Z20 511 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms