RNA–Protein interactions for RNA: ENST00000557965.1

AC090527.1-201, humanhuman

TSL 3 BASIC

Gene AC090527.1, Length 431 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090527.1-201ENST00000557965 USP17L5A8MUK1 530 aa12.84□□□□□ -0.35
AC090527.1-201ENST00000557965 LZTS3O60299 673 aaPredicted RBP12.84□□□□□ -0.35
AC090527.1-201ENST00000557965 SKOR1P84550 965 aa12.84□□□□□ -0.35
AC090527.1-201ENST00000557965 RNF135Q8IUD6 432 aa12.84□□□□□ -0.35
AC090527.1-201ENST00000557965 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
AC090527.1-201ENST00000557965 SLC10A4Q96EP9 437 aa12.84□□□□□ -0.35
AC090527.1-201ENST00000557965 USP17L3A6NCW0 530 aa12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 USP17L4A6NCW7 530 aa12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 ATG7O95352 703 aa12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 VARSP26640 1264 aaKnown RBP12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 MAP7D1Q3KQU3 841 aa12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 KANK4Q5T7N3 995 aaPredicted RBP12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 USP17L2Q6R6M4 530 aa12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 USP17L1Q7RTZ2 530 aa12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 TRAIPQ9BWF2 469 aa12.83□□□□□ -0.36
AC090527.1-201ENST00000557965 ESPNB1AK53 854 aa12.82□□□□□ -0.36
AC090527.1-201ENST00000557965 PDIA4P13667 645 aaKnown RBP12.82□□□□□ -0.36
AC090527.1-201ENST00000557965 PLPP7Q8NBV4 271 aa12.82□□□□□ -0.36
AC090527.1-201ENST00000557965 NBPF20Q3BBV1 942 aa12.81□□□□□ -0.36
AC090527.1-201ENST00000557965 TRAF7Q6Q0C0 670 aa12.81□□□□□ -0.36
AC090527.1-201ENST00000557965 CCDC125Q86Z20 511 aa12.81□□□□□ -0.36
AC090527.1-201ENST00000557965 EMID1Q96A84 441 aaPredicted RBP12.81□□□□□ -0.36
AC090527.1-201ENST00000557965 MAP4K5Q9Y4K4 846 aa12.81□□□□□ -0.36
AC090527.1-201ENST00000557965 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
AC090527.1-201ENST00000557965 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
AC090527.1-201ENST00000557965 PDE4CQ08493 712 aa12.79□□□□□ -0.36
AC090527.1-201ENST00000557965 RNF20Q5VTR2 975 aa12.79□□□□□ -0.36
AC090527.1-201ENST00000557965 LIAT1Q6ZQX7 453 aa12.79□□□□□ -0.36
AC090527.1-201ENST00000557965 VRTNQ9H8Y1 702 aa12.79□□□□□ -0.36
AC090527.1-201ENST00000557965 USTQ9Y2C2 406 aa12.79□□□□□ -0.36
AC090527.1-201ENST00000557965 GIGYF1O75420 1035 aaPredicted RBP12.78□□□□□ -0.36
AC090527.1-201ENST00000557965 NCOA4Q13772 614 aa12.77□□□□□ -0.37
AC090527.1-201ENST00000557965 ELOAQ14241 798 aaKnown RBP12.77□□□□□ -0.37
AC090527.1-201ENST00000557965 MPNDQ8N594 471 aa12.77□□□□□ -0.37
AC090527.1-201ENST00000557965 CCDC85AQ96PX6 553 aaPredicted RBP12.77□□□□□ -0.37
AC090527.1-201ENST00000557965 CDK15Q96Q40 435 aa12.75□□□□□ -0.37
AC090527.1-201ENST00000557965 FAM196BA6NMK8 535 aa12.74□□□□□ -0.37
AC090527.1-201ENST00000557965 ATP5J2-PTCD1G3V325 749 aa12.74□□□□□ -0.37
AC090527.1-201ENST00000557965 EML3Q32P44 896 aa12.74□□□□□ -0.37
AC090527.1-201ENST00000557965 TSGA10IPQ3SY00 556 aa12.74□□□□□ -0.37
AC090527.1-201ENST00000557965 RC3H1Q5TC82 1133 aaKnown RBP12.74□□□□□ -0.37
AC090527.1-201ENST00000557965 DEPDC4Q8N2C3 294 aa12.74□□□□□ -0.37
AC090527.1-201ENST00000557965 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
AC090527.1-201ENST00000557965 CSB-PGBD3P0DP91 1061 aa12.73□□□□□ -0.37
AC090527.1-201ENST00000557965 EHBP1Q8NDI1 1231 aa12.73□□□□□ -0.37
AC090527.1-201ENST00000557965 KCTD15Q96SI1 283 aaPredicted RBP12.73□□□□□ -0.37
AC090527.1-201ENST00000557965 MKRN1Q9UHC7 482 aaKnown RBP12.73□□□□□ -0.37
AC090527.1-201ENST00000557965 CDCA8Q53HL2 280 aa12.72□□□□□ -0.37
AC090527.1-201ENST00000557965 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.37
AC090527.1-201ENST00000557965 A0A0G2JS52 829 aa12.71□□□□□ -0.37
AC090527.1-201ENST00000557965 SIAH2O43255 324 aa12.71□□□□□ -0.37
AC090527.1-201ENST00000557965 SLC19A1P41440 591 aa12.71□□□□□ -0.37
AC090527.1-201ENST00000557965 WNT7AO00755 349 aa12.7□□□□□ -0.38
AC090527.1-201ENST00000557965 TMEM88BA6NKF7 163 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L10C9JJH3 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L12C9JPN9 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L11C9JVI0 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L21D6R901 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L18D6R9N7 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L22D6RA61 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L17D6RBQ6 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L19D6RCP7 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L20D6RJB6 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 USP17L24Q0WX57 530 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 INTS6LQ5JSJ4 861 aaKnown RBP12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 TRIM50Q86XT4 487 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 NOD1Q9Y239 953 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 SCRIBQ14160 1630 aa12.69□□□□□ -0.38
AC090527.1-201ENST00000557965 PTK7Q13308 1070 aa12.68□□□□□ -0.38
AC090527.1-201ENST00000557965 CRTC2Q53ET0 693 aaPredicted RBP12.68□□□□□ -0.38
AC090527.1-201ENST00000557965 SPRYD7Q5W111 196 aa12.68□□□□□ -0.38
AC090527.1-201ENST00000557965 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
AC090527.1-201ENST00000557965 ZMIZ1Q9ULJ6 1067 aa12.68□□□□□ -0.38
AC090527.1-201ENST00000557965 GRM5P41594 1212 aa12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 ATP1A2P50993 1020 aa12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 LARP1Q6PKG0 1096 aaKnown RBP12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 KCTD17Q8N5Z5 321 aa12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 SIRT1Q96EB6 747 aa12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 CDCA7Q9BWT1 371 aaPredicted RBP12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 NOVA2Q9UNW9 492 aaKnown RBP12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 PCDHB11Q9Y5F2 797 aa12.66□□□□□ -0.38
AC090527.1-201ENST00000557965 RASA1P20936 1047 aa12.65□□□□□ -0.38
AC090527.1-201ENST00000557965 CLDN10P78369 228 aa12.65□□□□□ -0.38
AC090527.1-201ENST00000557965 OXLD1Q5BKU9 147 aa12.65□□□□□ -0.38
AC090527.1-201ENST00000557965 USP4Q13107 963 aa12.64□□□□□ -0.39
AC090527.1-201ENST00000557965 LARGE2Q8N3Y3 721 aa12.64□□□□□ -0.39
AC090527.1-201ENST00000557965 OGFOD1Q8N543 542 aa12.64□□□□□ -0.39
AC090527.1-201ENST00000557965 TLL2Q9Y6L7 1015 aa12.64□□□□□ -0.39
AC090527.1-201ENST00000557965 ERVH48-1M5A8F1 160 aa12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 DKK1O94907 266 aa12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 ADH1CP00326 375 aa12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 TRIM26Q12899 539 aaPredicted RBP12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 ZNF598Q86UK7 904 aaKnown RBP12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 SIX5Q8N196 739 aa12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 MRGPRX2Q96LB1 330 aa12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 DNAAF2Q9NVR5 837 aaKnown RBP12.63□□□□□ -0.39
AC090527.1-201ENST00000557965 V9GY48 417 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms