RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SETBP1Q9Y6X0 1596 aa10.14□□□□□ -0.79
SPG11-204ENST00000557866 POLR1AO95602 1720 aaPredicted RBP10.14□□□□□ -0.79
SPG11-204ENST00000557866 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
SPG11-204ENST00000557866 TRAK1Q9UPV9 953 aa10.14□□□□□ -0.79
SPG11-204ENST00000557866 PER1O15534 1290 aaPredicted RBP10.13□□□□□ -0.79
SPG11-204ENST00000557866 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
SPG11-204ENST00000557866 ARIH1Q9Y4X5 557 aaPredicted RBP10.13□□□□□ -0.79
SPG11-204ENST00000557866 RIMS2Q9UQ26 1411 aa10.13□□□□□ -0.79
SPG11-204ENST00000557866 CENPBP07199 599 aaPredicted RBP10.12□□□□□ -0.79
SPG11-204ENST00000557866 PDIA6Q15084 440 aa10.12□□□□□ -0.79
SPG11-204ENST00000557866 PANK3Q9H999 370 aa10.12□□□□□ -0.79
SPG11-204ENST00000557866 ASXL1Q8IXJ9 1541 aa10.12□□□□□ -0.79
SPG11-204ENST00000557866 CENPJQ9HC77 1338 aaPredicted RBP10.11□□□□□ -0.79
SPG11-204ENST00000557866 SBNO2Q9Y2G9 1366 aa10.11□□□□□ -0.79
SPG11-204ENST00000557866 PPP1R3GB7ZBB8 358 aa10.1□□□□□ -0.79
SPG11-204ENST00000557866 HCSTQ9UBK5 93 aa10.1□□□□□ -0.79
SPG11-204ENST00000557866 BHMG1C9JSJ3 638 aaPredicted RBP10.09□□□□□ -0.79
SPG11-204ENST00000557866 CNGB1Q14028 1251 aaPredicted RBP10.09□□□□□ -0.79
SPG11-204ENST00000557866 CDCA8Q53HL2 280 aa10.09□□□□□ -0.79
SPG11-204ENST00000557866 DDX12PQ92771 950 aa10.09□□□□□ -0.79
SPG11-204ENST00000557866 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
SPG11-204ENST00000557866 MYO5BQ9ULV0 1848 aa10.09□□□□□ -0.79
SPG11-204ENST00000557866 PTPRMP28827 1452 aa10.09□□□□□ -0.79
SPG11-204ENST00000557866 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
SPG11-204ENST00000557866 C6orf132Q5T0Z8 1188 aa10.08□□□□□ -0.8
SPG11-204ENST00000557866 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.08□□□□□ -0.8
SPG11-204ENST00000557866 STK26Q9P289 416 aa10.08□□□□□ -0.8
SPG11-204ENST00000557866 TMEM2Q9UHN6 1383 aa10.08□□□□□ -0.8
SPG11-204ENST00000557866 MYO3AQ8NEV4 1616 aa10.07□□□□□ -0.8
SPG11-204ENST00000557866 ALKQ9UM73 1620 aa10.07□□□□□ -0.8
SPG11-204ENST00000557866 NLRP1Q9C000 1473 aa10.07□□□□□ -0.8
SPG11-204ENST00000557866 LTKP29376 864 aa10.07□□□□□ -0.8
SPG11-204ENST00000557866 YTHDC2Q9H6S0 1430 aaKnown RBP10.07□□□□□ -0.8
SPG11-204ENST00000557866 RALBP1Q15311 655 aa10.06□□□□□ -0.8
SPG11-204ENST00000557866 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
SPG11-204ENST00000557866 MRS2Q9HD23 443 aa10.06□□□□□ -0.8
SPG11-204ENST00000557866 LRPPRCP42704 1394 aaKnown RBP10.05□□□□□ -0.8
SPG11-204ENST00000557866 PARD3Q8TEW0 1356 aa10.05□□□□□ -0.8
SPG11-204ENST00000557866 COL9A1P20849 921 aa10.05□□□□□ -0.8
SPG11-204ENST00000557866 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
SPG11-204ENST00000557866 PRAM1Q96QH2 718 aa10.05□□□□□ -0.8
SPG11-204ENST00000557866 NBPF3Q9H094 633 aa10.05□□□□□ -0.8
SPG11-204ENST00000557866 METP08581 1390 aa10.04□□□□□ -0.8
SPG11-204ENST00000557866 C3P01024 1663 aa10.04□□□□□ -0.8
SPG11-204ENST00000557866 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
SPG11-204ENST00000557866 ONECUT3O60422 494 aaPredicted RBP10.04□□□□□ -0.8
SPG11-204ENST00000557866 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
SPG11-204ENST00000557866 SAFB2Q14151 953 aaKnown RBP eCLIP10.04□□□□□ -0.8
SPG11-204ENST00000557866 RBM33Q96EV2 1170 aaKnown RBP10.04□□□□□ -0.8
SPG11-204ENST00000557866 CARD14Q9BXL6 1004 aa10.04□□□□□ -0.8
SPG11-204ENST00000557866 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
SPG11-204ENST00000557866 KTN1Q86UP2 1357 aaKnown RBP10.03□□□□□ -0.8
SPG11-204ENST00000557866 ABCC11Q96J66 1382 aa10.03□□□□□ -0.8
SPG11-204ENST00000557866 NBR1Q14596 966 aa10.03□□□□□ -0.8
SPG11-204ENST00000557866 CC2D1BQ5T0F9 858 aaKnown RBP10.03□□□□□ -0.8
SPG11-204ENST00000557866 ADAMTS13Q76LX8 1427 aa10.03□□□□□ -0.8
SPG11-204ENST00000557866 TXNDC2Q86VQ3 553 aa10.03□□□□□ -0.8
SPG11-204ENST00000557866 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
SPG11-204ENST00000557866 MYBBP1AQ9BQG0 1328 aaKnown RBP10.03□□□□□ -0.8
SPG11-204ENST00000557866 TULP4Q9NRJ4 1543 aa10.02□□□□□ -0.8
SPG11-204ENST00000557866 PLEKHH1Q9ULM0 1364 aa10.02□□□□□ -0.8
SPG11-204ENST00000557866 UBR1Q8IWV7 1749 aa10.02□□□□□ -0.8
SPG11-204ENST00000557866 EN1Q05925 392 aaPredicted RBP10.02□□□□□ -0.81
SPG11-204ENST00000557866 WAPLQ7Z5K2 1190 aa10.02□□□□□ -0.81
SPG11-204ENST00000557866 SLC12A5Q9H2X9 1139 aa10.02□□□□□ -0.81
SPG11-204ENST00000557866 NRXN3Q9Y4C0 1643 aa10.02□□□□□ -0.81
SPG11-204ENST00000557866 ARHGAP23Q9P227 1491 aa10.02□□□□□ -0.81
SPG11-204ENST00000557866 EVC2Q86UK5 1308 aa10.02□□□□□ -0.81
SPG11-204ENST00000557866 PLEKHG1Q9ULL1 1385 aa10.01□□□□□ -0.81
SPG11-204ENST00000557866 FER1L4A9Z1Z3 1794 aa10.01□□□□□ -0.81
SPG11-204ENST00000557866 PROX2Q3B8N5 592 aa10.01□□□□□ -0.81
SPG11-204ENST00000557866 PNISRQ8TF01 805 aaKnown RBP10.01□□□□□ -0.81
SPG11-204ENST00000557866 POGKQ9P215 609 aa10.01□□□□□ -0.81
SPG11-204ENST00000557866 KNSTRNQ9Y448 316 aa10.01□□□□□ -0.81
SPG11-204ENST00000557866 KDM5AP29375 1690 aaKnown RBP10.01□□□□□ -0.81
SPG11-204ENST00000557866 ARHGEF28Q8N1W1 1705 aaKnown RBP10.01□□□□□ -0.81
SPG11-204ENST00000557866 DLC1Q96QB1 1528 aa10.01□□□□□ -0.81
SPG11-204ENST00000557866 MINK1Q8N4C8 1332 aaPredicted RBP10.01□□□□□ -0.81
SPG11-204ENST00000557866 BRD4O60885 1362 aaPredicted RBP10.01□□□□□ -0.81
SPG11-204ENST00000557866 MYOM1P52179 1685 aa10□□□□□ -0.81
SPG11-204ENST00000557866 QRICH2Q9H0J4 1663 aa10□□□□□ -0.81
SPG11-204ENST00000557866 MED14O60244 1454 aa10□□□□□ -0.81
SPG11-204ENST00000557866 SETD1AO15047 1707 aaKnown RBP10□□□□□ -0.81
SPG11-204ENST00000557866 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
SPG11-204ENST00000557866 MAP3K7O43318 606 aa10□□□□□ -0.81
SPG11-204ENST00000557866 FAM9BQ8IZU0 186 aa10□□□□□ -0.81
SPG11-204ENST00000557866 SLIT1O75093 1534 aa10□□□□□ -0.81
SPG11-204ENST00000557866 NPC1L1Q9UHC9 1359 aa10□□□□□ -0.81
SPG11-204ENST00000557866 ADAMTSL3P82987 1691 aa9.99□□□□□ -0.81
SPG11-204ENST00000557866 NLRP13Q86W25 1043 aa9.99□□□□□ -0.81
SPG11-204ENST00000557866 THEMISQ8N1K5 641 aaPredicted RBP9.99□□□□□ -0.81
SPG11-204ENST00000557866 TMC1Q8TDI8 760 aa9.99□□□□□ -0.81
SPG11-204ENST00000557866 ARHGEF1Q92888 912 aaKnown RBP9.99□□□□□ -0.81
SPG11-204ENST00000557866 WNT2BQ93097 391 aa9.99□□□□□ -0.81
SPG11-204ENST00000557866 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
SPG11-204ENST00000557866 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
SPG11-204ENST00000557866 TECPR2O15040 1411 aa9.99□□□□□ -0.81
SPG11-204ENST00000557866 HNRNPUQ00839 825 aaKnown RBP eCLIP9.98□□□□□ -0.81
SPG11-204ENST00000557866 BCANQ96GW7 911 aa9.98□□□□□ -0.81
SPG11-204ENST00000557866 CDK19Q9BWU1 502 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms