RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NBPF14Q5TI25 921 aa22.79■■□□□ 1.24
SCFD1-224ENST00000557713 OVOS2A0A0G2JMS6 1433 aa22.79■■□□□ 1.24
SCFD1-224ENST00000557713 OVOS2A0A0J9YW53 1432 aa22.79■■□□□ 1.24
SCFD1-224ENST00000557713 OVOS2Q6IE36 1432 aa22.79■■□□□ 1.24
SCFD1-224ENST00000557713 KTN1Q86UP2 1357 aaKnown RBP22.77■■□□□ 1.24
SCFD1-224ENST00000557713 LRRC37A3O60309 1634 aa22.77■■□□□ 1.24
SCFD1-224ENST00000557713 CDCA7Q9BWT1 371 aaPredicted RBP22.76■■□□□ 1.23
SCFD1-224ENST00000557713 SBNO2Q9Y2G9 1366 aa22.76■■□□□ 1.23
SCFD1-224ENST00000557713 PLSCR1O15162 318 aa22.75■■□□□ 1.23
SCFD1-224ENST00000557713 SOX12O15370 315 aa22.75■■□□□ 1.23
SCFD1-224ENST00000557713 MARCH10Q8NA82 808 aaPredicted RBP22.75■■□□□ 1.23
SCFD1-224ENST00000557713 CARD10Q9BWT7 1032 aa22.75■■□□□ 1.23
SCFD1-224ENST00000557713 NFAT5O94916 1531 aa22.74■■□□□ 1.23
SCFD1-224ENST00000557713 PTF1AQ7RTS3 328 aa22.73■■□□□ 1.23
SCFD1-224ENST00000557713 BCL11BQ9C0K0 894 aaPredicted RBP22.73■■□□□ 1.23
SCFD1-224ENST00000557713 RGPD5Q99666 1765 aa22.73■■□□□ 1.23
SCFD1-224ENST00000557713 SBF2Q86WG5 1849 aa22.73■■□□□ 1.23
SCFD1-224ENST00000557713 CARD11Q9BXL7 1154 aa22.72■■□□□ 1.23
SCFD1-224ENST00000557713 WNK3Q9BYP7 1800 aa22.72■■□□□ 1.23
SCFD1-224ENST00000557713 USP31Q70CQ4 1352 aa22.72■■□□□ 1.23
SCFD1-224ENST00000557713 BCL9O00512 1426 aa22.72■■□□□ 1.23
SCFD1-224ENST00000557713 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
SCFD1-224ENST00000557713 MON2Q7Z3U7 1717 aa22.71■■□□□ 1.23
SCFD1-224ENST00000557713 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.7■■□□□ 1.222e-7■■■■□ 20.3
SCFD1-224ENST00000557713 CD163L1Q9NR16 1453 aa22.7■■□□□ 1.22
SCFD1-224ENST00000557713 RGPD3A6NKT7 1758 aaPredicted RBP22.69■■□□□ 1.22
SCFD1-224ENST00000557713 RGPD4Q7Z3J3 1758 aa22.69■■□□□ 1.22
SCFD1-224ENST00000557713 ABCC6O95255 1503 aa22.68■■□□□ 1.22
SCFD1-224ENST00000557713 EXOC5O00471 708 aa22.68■■□□□ 1.22
SCFD1-224ENST00000557713 PROM2Q8N271 834 aa22.68■■□□□ 1.22
SCFD1-224ENST00000557713 CCDC7Q96M83 1385 aa22.67■■□□□ 1.22
SCFD1-224ENST00000557713 NME9Q86XW9 330 aa22.67■■□□□ 1.22
SCFD1-224ENST00000557713 USP54Q70EL1 1684 aa22.66■■□□□ 1.22
SCFD1-224ENST00000557713 SLC12A5Q9H2X9 1139 aa22.66■■□□□ 1.22
SCFD1-224ENST00000557713 KCNQ2O43526 872 aa22.65■■□□□ 1.22
SCFD1-224ENST00000557713 TMC1Q8TDI8 760 aa22.65■■□□□ 1.22
SCFD1-224ENST00000557713 SPON1Q9HCB6 807 aa22.65■■□□□ 1.22
SCFD1-224ENST00000557713 HDGFL2Q7Z4V5 671 aaPredicted RBP22.64■■□□□ 1.21
SCFD1-224ENST00000557713 PUS7Q96PZ0 661 aaKnown RBP22.64■■□□□ 1.21
SCFD1-224ENST00000557713 ANO8Q9HCE9 1232 aaPredicted RBP22.64■■□□□ 1.21
SCFD1-224ENST00000557713 TONSLQ96HA7 1378 aa22.62■■□□□ 1.21
SCFD1-224ENST00000557713 ERBB3P21860 1342 aa22.61■■□□□ 1.21
SCFD1-224ENST00000557713 EDC4Q6P2E9 1401 aaKnown RBP22.61■■□□□ 1.21
SCFD1-224ENST00000557713 TERF2IPQ9NYB0 399 aa22.6■■□□□ 1.21
SCFD1-224ENST00000557713 TNS2Q63HR2 1409 aa22.59■■□□□ 1.21
SCFD1-224ENST00000557713 TXNRD1Q16881 649 aa22.59■■□□□ 1.21
SCFD1-224ENST00000557713 NLRP2Q9NX02 1062 aa22.59■■□□□ 1.21
SCFD1-224ENST00000557713 ANKRD24Q8TF21 1146 aa22.58■■□□□ 1.21
SCFD1-224ENST00000557713 PPP1R1BQ9UD71 204 aaPredicted RBP22.58■■□□□ 1.21
SCFD1-224ENST00000557713 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
SCFD1-224ENST00000557713 PDGFDQ9GZP0 370 aaPredicted RBP22.57■■□□□ 1.2
SCFD1-224ENST00000557713 LTN1O94822 1766 aa22.57■■□□□ 1.2
SCFD1-224ENST00000557713 CASZ1Q86V15 1759 aa22.56■■□□□ 1.2
SCFD1-224ENST00000557713 IL2RBP14784 551 aa22.56■■□□□ 1.2
SCFD1-224ENST00000557713 TESK2Q96S53 571 aa22.56■■□□□ 1.2
SCFD1-224ENST00000557713 NINLQ9Y2I6 1382 aa22.53■■□□□ 1.2
SCFD1-224ENST00000557713 ST20-MTHFSA0A0A6YYL1 179 aa22.53■■□□□ 1.2
SCFD1-224ENST00000557713 SLC15A2Q16348 729 aa22.53■■□□□ 1.2
SCFD1-224ENST00000557713 IP6K1Q92551 441 aa22.53■■□□□ 1.2
SCFD1-224ENST00000557713 ACSBG1Q96GR2 724 aa22.53■■□□□ 1.2
SCFD1-224ENST00000557713 STK32BQ9NY57 414 aa22.53■■□□□ 1.2
SCFD1-224ENST00000557713 NHSQ6T4R5 1651 aa22.52■■□□□ 1.2
SCFD1-224ENST00000557713 ZBTB7AO95365 584 aa22.5■■□□□ 1.19
SCFD1-224ENST00000557713 PTGER2P43116 358 aa22.5■■□□□ 1.19
SCFD1-224ENST00000557713 SLC24A1O60721 1099 aa22.49■■□□□ 1.19
SCFD1-224ENST00000557713 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
SCFD1-224ENST00000557713 COG3Q96JB2 828 aa22.46■■□□□ 1.19
SCFD1-224ENST00000557713 FBLN1P23142 703 aa22.45■■□□□ 1.18
SCFD1-224ENST00000557713 YY1P25490 414 aa22.45■■□□□ 1.18
SCFD1-224ENST00000557713 LTV1Q96GA3 475 aaPredicted RBP22.45■■□□□ 1.18
SCFD1-224ENST00000557713 MAP3K19Q56UN5 1328 aa22.45■■□□□ 1.18
SCFD1-224ENST00000557713 DCAF8L1A6NGE4 600 aa22.44■■□□□ 1.18
SCFD1-224ENST00000557713 HOXC9P31274 260 aa22.44■■□□□ 1.18
SCFD1-224ENST00000557713 MTFR1LQ9H019 292 aa22.43■■□□□ 1.18
SCFD1-224ENST00000557713 BTAF1O14981 1849 aa22.43■■□□□ 1.18
SCFD1-224ENST00000557713 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
SCFD1-224ENST00000557713 DDX54Q8TDD1 881 aaKnown RBP22.42■■□□□ 1.18
SCFD1-224ENST00000557713 SGIP1Q9BQI5 828 aa22.42■■□□□ 1.18
SCFD1-224ENST00000557713 MYOM1P52179 1685 aa22.42■■□□□ 1.18
SCFD1-224ENST00000557713 FAM208AQ9UK61 1670 aaKnown RBP22.42■■□□□ 1.18
SCFD1-224ENST00000557713 ANKRD36BQ8N2N9 1353 aa22.41■■□□□ 1.18
SCFD1-224ENST00000557713 LRRC4BQ9NT99 713 aa22.41■■□□□ 1.18
SCFD1-224ENST00000557713 AMPHP49418 695 aa22.4■■□□□ 1.18
SCFD1-224ENST00000557713 FYB1O15117 783 aa22.39■■□□□ 1.17
SCFD1-224ENST00000557713 TMF1P82094 1093 aa22.38■■□□□ 1.17
SCFD1-224ENST00000557713 ZNF827Q17R98 1081 aa22.38■■□□□ 1.17
SCFD1-224ENST00000557713 SYT17Q9BSW7 474 aa22.38■■□□□ 1.17
SCFD1-224ENST00000557713 FHDC1Q9C0D6 1143 aaPredicted RBP22.37■■□□□ 1.17
SCFD1-224ENST00000557713 SLC27A3Q5K4L6 730 aa22.36■■□□□ 1.17
SCFD1-224ENST00000557713 ZCRB1Q8TBF4 217 aaKnown RBP22.36■■□□□ 1.17
SCFD1-224ENST00000557713 AKT1S1Q96B36 256 aa22.36■■□□□ 1.17
SCFD1-224ENST00000557713 GGNBP2Q9H3C7 697 aa22.36■■□□□ 1.17
SCFD1-224ENST00000557713 PRIM1P49642 420 aaKnown RBP22.35■■□□□ 1.17
SCFD1-224ENST00000557713 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
SCFD1-224ENST00000557713 RRS1Q15050 365 aaKnown RBP22.35■■□□□ 1.17
SCFD1-224ENST00000557713 RTL1A6NKG5 1358 aa22.35■■□□□ 1.17
SCFD1-224ENST00000557713 USP47Q96K76 1375 aa22.35■■□□□ 1.17
SCFD1-224ENST00000557713 NBPF6Q5VWK0 638 aa22.34■■□□□ 1.17
SCFD1-224ENST00000557713 NBPF4Q96M43 638 aa22.34■■□□□ 1.17
SCFD1-224ENST00000557713 RGPD2P0DJD1 1756 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms