RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
TMEM260-215ENST00000557626 CRB1P82279 1406 aa20.09■□□□□ 0.81
TMEM260-215ENST00000557626 NUTM2GQ5VZR2 741 aa20.08■□□□□ 0.81
TMEM260-215ENST00000557626 COL5A2P05997 1499 aaPredicted RBP20.07■□□□□ 0.8
TMEM260-215ENST00000557626 JMYQ8N9B5 988 aa20.07■□□□□ 0.8
TMEM260-215ENST00000557626 MARCH10Q8NA82 808 aaPredicted RBP20.07■□□□□ 0.8
TMEM260-215ENST00000557626 SLC16A10Q8TF71 515 aa20.07■□□□□ 0.8
TMEM260-215ENST00000557626 WWC3Q9ULE0 1092 aa20.07■□□□□ 0.8
TMEM260-215ENST00000557626 PIK3C2GO75747 1445 aa20.07■□□□□ 0.8
TMEM260-215ENST00000557626 EIF3AQ14152 1382 aaKnown RBP20.07■□□□□ 0.8
TMEM260-215ENST00000557626 ZNF827Q17R98 1081 aa20.06■□□□□ 0.8
TMEM260-215ENST00000557626 KLRG1Q96E93 195 aa20.06■□□□□ 0.8
TMEM260-215ENST00000557626 PRR36Q9H6K5 1346 aa20.05■□□□□ 0.8
TMEM260-215ENST00000557626 WNK3Q9BYP7 1800 aa20.05■□□□□ 0.8
TMEM260-215ENST00000557626 CPDO75976 1380 aa20.05■□□□□ 0.8
TMEM260-215ENST00000557626 ANKRD30BQ9BXX2 1392 aa20.05■□□□□ 0.8
TMEM260-215ENST00000557626 TULP4Q9NRJ4 1543 aa20.04■□□□□ 0.8
TMEM260-215ENST00000557626 QSER1Q2KHR3 1735 aa20.03■□□□□ 0.8
TMEM260-215ENST00000557626 POGKQ9P215 609 aa20.03■□□□□ 0.8
TMEM260-215ENST00000557626 HIRIP3Q9BW71 556 aaPredicted RBP20.01■□□□□ 0.79
TMEM260-215ENST00000557626 TOMM70O94826 608 aa20■□□□□ 0.79
TMEM260-215ENST00000557626 RGL3Q3MIN7 710 aa20■□□□□ 0.79
TMEM260-215ENST00000557626 ITGAEP38570 1179 aa19.99■□□□□ 0.79
TMEM260-215ENST00000557626 NHSQ6T4R5 1651 aa19.99■□□□□ 0.79
TMEM260-215ENST00000557626 ARHGEF28Q8N1W1 1705 aaKnown RBP19.99■□□□□ 0.79
TMEM260-215ENST00000557626 ITSN1Q15811 1721 aa19.98■□□□□ 0.79
TMEM260-215ENST00000557626 HTRA3P83110 453 aa19.97■□□□□ 0.79
TMEM260-215ENST00000557626 TOM1L2Q6ZVM7 507 aa19.96■□□□□ 0.79
TMEM260-215ENST00000557626 CDCA7Q9BWT1 371 aaPredicted RBP19.96■□□□□ 0.79
TMEM260-215ENST00000557626 TUBGCP6Q96RT7 1819 aa19.94■□□□□ 0.78
TMEM260-215ENST00000557626 PNPLA7Q6ZV29 1317 aa19.94■□□□□ 0.78
TMEM260-215ENST00000557626 MINK1Q8N4C8 1332 aaPredicted RBP19.94■□□□□ 0.78
TMEM260-215ENST00000557626 AKT1S1Q96B36 256 aa19.93■□□□□ 0.78
TMEM260-215ENST00000557626 C14orf93Q9H972 538 aaKnown RBP19.93■□□□□ 0.78
TMEM260-215ENST00000557626 ZBTB7CA1YPR0 619 aa19.92■□□□□ 0.78
TMEM260-215ENST00000557626 USP19O94966 1318 aa19.92■□□□□ 0.78
TMEM260-215ENST00000557626 BTAF1O14981 1849 aa19.92■□□□□ 0.78
TMEM260-215ENST00000557626 BRD4O60885 1362 aaPredicted RBP19.92■□□□□ 0.78
TMEM260-215ENST00000557626 WASLO00401 505 aaPredicted RBP19.91■□□□□ 0.78
TMEM260-215ENST00000557626 ABTB2Q8N961 1025 aa19.91■□□□□ 0.78
TMEM260-215ENST00000557626 LRRC4BQ9NT99 713 aa19.91■□□□□ 0.78
TMEM260-215ENST00000557626 SPATA31E1Q6ZUB1 1445 aa19.91■□□□□ 0.78
TMEM260-215ENST00000557626 ACSBG1Q96GR2 724 aa19.9■□□□□ 0.78
TMEM260-215ENST00000557626 GCP02774 474 aa19.89■□□□□ 0.77
TMEM260-215ENST00000557626 CFAP70Q5T0N1 1121 aa19.89■□□□□ 0.77
TMEM260-215ENST00000557626 TFCP2L1Q9NZI6 479 aa19.89■□□□□ 0.77
TMEM260-215ENST00000557626 EXOC5O00471 708 aa19.88■□□□□ 0.77
TMEM260-215ENST00000557626 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
TMEM260-215ENST00000557626 HSPA1AP0DMV8 641 aaKnown RBP19.87■□□□□ 0.77
TMEM260-215ENST00000557626 HSPA1BP0DMV9 641 aaKnown RBP19.87■□□□□ 0.77
TMEM260-215ENST00000557626 USP6P35125 1406 aa19.85■□□□□ 0.77
TMEM260-215ENST00000557626 WDR17Q8IZU2 1322 aa19.85■□□□□ 0.77
TMEM260-215ENST00000557626 RBM46Q8TBY0 533 aaKnown RBP19.85■□□□□ 0.77
TMEM260-215ENST00000557626 SLC4A1APQ9BWU0 796 aaKnown RBP19.85■□□□□ 0.77
TMEM260-215ENST00000557626 CD2APQ9Y5K6 639 aa19.85■□□□□ 0.77
TMEM260-215ENST00000557626 TNS2Q63HR2 1409 aa19.85■□□□□ 0.77
TMEM260-215ENST00000557626 NLRP13Q86W25 1043 aa19.84■□□□□ 0.77
TMEM260-215ENST00000557626 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
TMEM260-215ENST00000557626 POLR3AO14802 1390 aaPredicted RBP19.83■□□□□ 0.76
TMEM260-215ENST00000557626 SLC27A3Q5K4L6 730 aa19.82■□□□□ 0.76
TMEM260-215ENST00000557626 ACEP12821 1306 aa19.81■□□□□ 0.76
TMEM260-215ENST00000557626 TRPM1Q7Z4N2 1603 aa19.81■□□□□ 0.76
TMEM260-215ENST00000557626 MSH5O43196 834 aa19.81■□□□□ 0.76
TMEM260-215ENST00000557626 C16orf71Q8IYS4 520 aaPredicted RBP19.81■□□□□ 0.76
TMEM260-215ENST00000557626 NMRK2Q9NPI5 230 aa19.81■□□□□ 0.76
TMEM260-215ENST00000557626 TRAK1Q9UPV9 953 aa19.81■□□□□ 0.76
TMEM260-215ENST00000557626 FSTL1Q12841 308 aa19.79■□□□□ 0.76
TMEM260-215ENST00000557626 MSL1Q68DK7 614 aa19.79■□□□□ 0.76
TMEM260-215ENST00000557626 COL18A1P39060 1754 aa19.79■□□□□ 0.76
TMEM260-215ENST00000557626 ABCC6O95255 1503 aa19.78■□□□□ 0.76
TMEM260-215ENST00000557626 FAM161AQ3B820 660 aa19.78■□□□□ 0.76
TMEM260-215ENST00000557626 IGSF1Q8N6C5 1336 aa19.77■□□□□ 0.76
TMEM260-215ENST00000557626 CARD10Q9BWT7 1032 aa19.77■□□□□ 0.76
TMEM260-215ENST00000557626 PIK3C2AO00443 1686 aa19.77■□□□□ 0.76
TMEM260-215ENST00000557626 CICQ96RK0 1608 aaPredicted RBP19.76■□□□□ 0.75
TMEM260-215ENST00000557626 CSB-PGBD3P0DP91 1061 aa19.76■□□□□ 0.75
TMEM260-215ENST00000557626 AXIN2Q9Y2T1 843 aa19.75■□□□□ 0.75
TMEM260-215ENST00000557626 ADGRB1O14514 1584 aa19.74■□□□□ 0.75
TMEM260-215ENST00000557626 RGPD5Q99666 1765 aa19.74■□□□□ 0.75
TMEM260-215ENST00000557626 KCNQ4P56696 695 aa19.73■□□□□ 0.75
TMEM260-215ENST00000557626 CCDC7Q96M83 1385 aa19.72■□□□□ 0.75
TMEM260-215ENST00000557626 PPIP5K1Q6PFW1 1433 aa19.72■□□□□ 0.75
TMEM260-215ENST00000557626 COL23A1Q86Y22 540 aaPredicted RBP19.72■□□□□ 0.75
TMEM260-215ENST00000557626 SLIT3O75094 1523 aa19.71■□□□□ 0.75
TMEM260-215ENST00000557626 CPSF1Q10570 1443 aaKnown RBP19.69■□□□□ 0.74
TMEM260-215ENST00000557626 PLEKHG3A1L390 1219 aa19.69■□□□□ 0.74
TMEM260-215ENST00000557626 CCDC61Q9Y6R9 512 aa19.68■□□□□ 0.74
TMEM260-215ENST00000557626 NLRP6P59044 892 aa19.67■□□□□ 0.74
TMEM260-215ENST00000557626 LY75O60449 1722 aa19.66■□□□□ 0.74
TMEM260-215ENST00000557626 CDK19Q9BWU1 502 aa19.66■□□□□ 0.74
TMEM260-215ENST00000557626 SMC1BQ8NDV3 1235 aa19.62■□□□□ 0.73
TMEM260-215ENST00000557626 CCNL1Q9UK58 526 aaPredicted RBP19.61■□□□□ 0.73
TMEM260-215ENST00000557626 C10orf71Q711Q0 1435 aa19.6■□□□□ 0.73
TMEM260-215ENST00000557626 MLLT1Q03111 559 aaPredicted RBP19.6■□□□□ 0.73
TMEM260-215ENST00000557626 ARHGEF25Q86VW2 580 aa19.6■□□□□ 0.73
TMEM260-215ENST00000557626 KIAA1210Q9ULL0 1709 aa19.59■□□□□ 0.73
TMEM260-215ENST00000557626 PLEKHG2Q9H7P9 1386 aa19.59■□□□□ 0.73
TMEM260-215ENST00000557626 IL2RBP14784 551 aa19.59■□□□□ 0.73
TMEM260-215ENST00000557626 SYTL4Q96C24 671 aaPredicted RBP19.59■□□□□ 0.73
TMEM260-215ENST00000557626 KCPQ6ZWJ8 1503 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms