RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 DCAF11Q8TEB1 546 aa10.74□□□□□ -0.69
PRKCH-225ENST00000557559 CDCA7Q9BWT1 371 aaPredicted RBP10.74□□□□□ -0.69
PRKCH-225ENST00000557559 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
PRKCH-225ENST00000557559 UTRNP46939 3433 aa10.74□□□□□ -0.69
PRKCH-225ENST00000557559 SLIT3O75094 1523 aa10.74□□□□□ -0.69
PRKCH-225ENST00000557559 KIAA1210Q9ULL0 1709 aa10.73□□□□□ -0.69
PRKCH-225ENST00000557559 GCP02774 474 aa10.73□□□□□ -0.69
PRKCH-225ENST00000557559 CDK19Q9BWU1 502 aa10.73□□□□□ -0.69
PRKCH-225ENST00000557559 ANO8Q9HCE9 1232 aaPredicted RBP10.73□□□□□ -0.69
PRKCH-225ENST00000557559 AATKQ6ZMQ8 1374 aa10.73□□□□□ -0.69
PRKCH-225ENST00000557559 CHD4Q14839 1912 aa10.72□□□□□ -0.69
PRKCH-225ENST00000557559 SENP3-EIF4A1A0A087X0R7 540 aa10.72□□□□□ -0.69
PRKCH-225ENST00000557559 STK32BQ9NY57 414 aa10.72□□□□□ -0.69
PRKCH-225ENST00000557559 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
PRKCH-225ENST00000557559 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
PRKCH-225ENST00000557559 QRICH2Q9H0J4 1663 aa10.72□□□□□ -0.69
PRKCH-225ENST00000557559 TOM1L2Q6ZVM7 507 aa10.71□□□□□ -0.69
PRKCH-225ENST00000557559 ZBTB7AO95365 584 aa10.7□□□□□ -0.7
PRKCH-225ENST00000557559 PTGER2P43116 358 aa10.7□□□□□ -0.7
PRKCH-225ENST00000557559 MTFR1LQ9H019 292 aa10.7□□□□□ -0.7
PRKCH-225ENST00000557559 ABCC6O95255 1503 aa10.69□□□□□ -0.7
PRKCH-225ENST00000557559 USP6P35125 1406 aa10.69□□□□□ -0.7
PRKCH-225ENST00000557559 CPSF1Q10570 1443 aaKnown RBP10.69□□□□□ -0.7
PRKCH-225ENST00000557559 MAP3K5Q99683 1374 aa10.69□□□□□ -0.7
PRKCH-225ENST00000557559 RAB3GAP2Q9H2M9 1393 aa10.69□□□□□ -0.7
PRKCH-225ENST00000557559 WDR17Q8IZU2 1322 aa10.69□□□□□ -0.7
PRKCH-225ENST00000557559 SYT17Q9BSW7 474 aa10.69□□□□□ -0.7
PRKCH-225ENST00000557559 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
PRKCH-225ENST00000557559 ZBTB7CA1YPR0 619 aa10.68□□□□□ -0.7
PRKCH-225ENST00000557559 C1QTNF8P60827 252 aa10.68□□□□□ -0.7
PRKCH-225ENST00000557559 SRPK2P78362 688 aaKnown RBP10.68□□□□□ -0.7
PRKCH-225ENST00000557559 SLC15A2Q16348 729 aa10.68□□□□□ -0.7
PRKCH-225ENST00000557559 NHSQ6T4R5 1651 aa10.68□□□□□ -0.7
PRKCH-225ENST00000557559 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
PRKCH-225ENST00000557559 COL18A1P39060 1754 aa10.67□□□□□ -0.7
PRKCH-225ENST00000557559 PIK3C2AO00443 1686 aa10.67□□□□□ -0.7
PRKCH-225ENST00000557559 TRPM1Q7Z4N2 1603 aa10.67□□□□□ -0.7
PRKCH-225ENST00000557559 NLRP6P59044 892 aa10.67□□□□□ -0.7
PRKCH-225ENST00000557559 TXNRD1Q16881 649 aa10.67□□□□□ -0.7
PRKCH-225ENST00000557559 ATF5Q9Y2D1 282 aaPredicted RBP10.67□□□□□ -0.7
PRKCH-225ENST00000557559 CCDC7Q96M83 1385 aa10.66□□□□□ -0.7
PRKCH-225ENST00000557559 MARCH10Q8NA82 808 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-225ENST00000557559 PDGFDQ9GZP0 370 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-225ENST00000557559 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
PRKCH-225ENST00000557559 PAPPAQ13219 1627 aa10.66□□□□□ -0.7
PRKCH-225ENST00000557559 CENPJQ9HC77 1338 aaPredicted RBP10.65□□□□□ -0.7
PRKCH-225ENST00000557559 PROM2Q8N271 834 aa10.65□□□□□ -0.7
PRKCH-225ENST00000557559 KCNH5Q8NCM2 988 aa10.65□□□□□ -0.7
PRKCH-225ENST00000557559 ARXQ96QS3 562 aa10.65□□□□□ -0.7
PRKCH-225ENST00000557559 EXOC5O00471 708 aa10.64□□□□□ -0.71
PRKCH-225ENST00000557559 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
PRKCH-225ENST00000557559 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
PRKCH-225ENST00000557559 IFFO2Q5TF58 517 aa10.64□□□□□ -0.71
PRKCH-225ENST00000557559 SGIP1Q9BQI5 828 aa10.64□□□□□ -0.71
PRKCH-225ENST00000557559 CARD10Q9BWT7 1032 aa10.64□□□□□ -0.71
PRKCH-225ENST00000557559 PTF1AQ7RTS3 328 aa10.63□□□□□ -0.71
PRKCH-225ENST00000557559 QSER1Q2KHR3 1735 aa10.62□□□□□ -0.71
PRKCH-225ENST00000557559 GPR162Q16538 588 aa10.62□□□□□ -0.71
PRKCH-225ENST00000557559 TTC21AQ8NDW8 1320 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 CEP350Q5VT06 3117 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 MYCNP04198 464 aaPredicted RBP10.61□□□□□ -0.71
PRKCH-225ENST00000557559 POLD1P28340 1107 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 ARHGEF25Q86VW2 580 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 CABP2Q9NPB3 220 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 NFAT5O94916 1531 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 BTAF1O14981 1849 aa10.61□□□□□ -0.71
PRKCH-225ENST00000557559 RGPD5Q99666 1765 aa10.6□□□□□ -0.71
PRKCH-225ENST00000557559 SLC16A10Q8TF71 515 aa10.6□□□□□ -0.71
PRKCH-225ENST00000557559 CABP1Q9NZU7 370 aa10.6□□□□□ -0.71
PRKCH-225ENST00000557559 AXIN2Q9Y2T1 843 aa10.6□□□□□ -0.71
PRKCH-225ENST00000557559 EVC2Q86UK5 1308 aa10.59□□□□□ -0.71
PRKCH-225ENST00000557559 GOLGB1Q14789 3259 aaKnown RBP10.59□□□□□ -0.71
PRKCH-225ENST00000557559 COL24A1Q17RW2 1714 aa10.59□□□□□ -0.71
PRKCH-225ENST00000557559 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
PRKCH-225ENST00000557559 USP54Q70EL1 1684 aa10.59□□□□□ -0.71
PRKCH-225ENST00000557559 SHANK3Q9BYB0 1731 aa10.58□□□□□ -0.72
PRKCH-225ENST00000557559 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
PRKCH-225ENST00000557559 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
PRKCH-225ENST00000557559 ERBB3P21860 1342 aa10.57□□□□□ -0.72
PRKCH-225ENST00000557559 FAM208AQ9UK61 1670 aaKnown RBP10.57□□□□□ -0.72
PRKCH-225ENST00000557559 MON2Q7Z3U7 1717 aa10.56□□□□□ -0.72
PRKCH-225ENST00000557559 SOX12O15370 315 aa10.56□□□□□ -0.72
PRKCH-225ENST00000557559 IL2RBP14784 551 aa10.56□□□□□ -0.72
PRKCH-225ENST00000557559 NBPF1Q3BBV0 1214 aa10.56□□□□□ -0.72
PRKCH-225ENST00000557559 PELP1Q8IZL8 1130 aaKnown RBP10.56□□□□□ -0.72
PRKCH-225ENST00000557559 KLHL34Q8N239 644 aa10.56□□□□□ -0.72
PRKCH-225ENST00000557559 ACSBG1Q96GR2 724 aa10.56□□□□□ -0.72
PRKCH-225ENST00000557559 LTN1O94822 1766 aa10.55□□□□□ -0.72
PRKCH-225ENST00000557559 GRIN3BO60391 1043 aa10.55□□□□□ -0.72
PRKCH-225ENST00000557559 ZNF827Q17R98 1081 aa10.55□□□□□ -0.72
PRKCH-225ENST00000557559 KTN1Q86UP2 1357 aaKnown RBP10.54□□□□□ -0.72
PRKCH-225ENST00000557559 NLRP2Q9NX02 1062 aa10.54□□□□□ -0.72
PRKCH-225ENST00000557559 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
PRKCH-225ENST00000557559 TFCP2L1Q9NZI6 479 aa10.53□□□□□ -0.72
PRKCH-225ENST00000557559 TUBGCP6Q96RT7 1819 aa10.53□□□□□ -0.72
PRKCH-225ENST00000557559 PNPLA7Q6ZV29 1317 aa10.53□□□□□ -0.72
PRKCH-225ENST00000557559 USP31Q70CQ4 1352 aa10.52□□□□□ -0.72
PRKCH-225ENST00000557559 HMGB2P26583 209 aaKnown RBP10.52□□□□□ -0.73
PRKCH-225ENST00000557559 LRRC4BQ9NT99 713 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms