RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 POLR3AO14802 1390 aaPredicted RBP11.82□□□□□ -0.52
PCNX1-215ENST00000557428 TOM1L2Q6ZVM7 507 aa11.82□□□□□ -0.52
PCNX1-215ENST00000557428 USP19O94966 1318 aa11.82□□□□□ -0.52
PCNX1-215ENST00000557428 PLSCR1O15162 318 aa11.81□□□□□ -0.52
PCNX1-215ENST00000557428 GCP02774 474 aa11.81□□□□□ -0.52
PCNX1-215ENST00000557428 NLRP13Q86W25 1043 aa11.81□□□□□ -0.52
PCNX1-215ENST00000557428 RGPD5Q99666 1765 aa11.81□□□□□ -0.52
PCNX1-215ENST00000557428 PPIP5K1Q6PFW1 1433 aa11.8□□□□□ -0.52
PCNX1-215ENST00000557428 PTGER2P43116 358 aa11.8□□□□□ -0.52
PCNX1-215ENST00000557428 C1QTNF8P60827 252 aa11.8□□□□□ -0.52
PCNX1-215ENST00000557428 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
PCNX1-215ENST00000557428 KLHL34Q8N239 644 aa11.8□□□□□ -0.52
PCNX1-215ENST00000557428 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
PCNX1-215ENST00000557428 PELP1Q8IZL8 1130 aaKnown RBP11.79□□□□□ -0.52
PCNX1-215ENST00000557428 SYT17Q9BSW7 474 aa11.79□□□□□ -0.52
PCNX1-215ENST00000557428 UTRNP46939 3433 aa11.79□□□□□ -0.52
PCNX1-215ENST00000557428 SOX12O15370 315 aa11.78□□□□□ -0.52
PCNX1-215ENST00000557428 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
PCNX1-215ENST00000557428 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
PCNX1-215ENST00000557428 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
PCNX1-215ENST00000557428 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.53
PCNX1-215ENST00000557428 NLRP6P59044 892 aa11.77□□□□□ -0.53
PCNX1-215ENST00000557428 SLC15A2Q16348 729 aa11.77□□□□□ -0.53
PCNX1-215ENST00000557428 GPR162Q16538 588 aa11.77□□□□□ -0.53
PCNX1-215ENST00000557428 PROM2Q8N271 834 aa11.77□□□□□ -0.53
PCNX1-215ENST00000557428 MARCH10Q8NA82 808 aaPredicted RBP11.77□□□□□ -0.53
PCNX1-215ENST00000557428 MTFR1LQ9H019 292 aa11.77□□□□□ -0.53
PCNX1-215ENST00000557428 SLIT3O75094 1523 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 KAT6BQ8WYB5 2073 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 PIK3C2AO00443 1686 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 NHSQ6T4R5 1651 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
PCNX1-215ENST00000557428 ARXQ96QS3 562 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 COL18A1P39060 1754 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 AATKQ6ZMQ8 1374 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 RAB3GAP2Q9H2M9 1393 aa11.76□□□□□ -0.53
PCNX1-215ENST00000557428 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
PCNX1-215ENST00000557428 WDR17Q8IZU2 1322 aa11.75□□□□□ -0.53
PCNX1-215ENST00000557428 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
PCNX1-215ENST00000557428 KIAA1210Q9ULL0 1709 aa11.74□□□□□ -0.53
PCNX1-215ENST00000557428 BTAF1O14981 1849 aa11.73□□□□□ -0.53
PCNX1-215ENST00000557428 USP6P35125 1406 aa11.73□□□□□ -0.53
PCNX1-215ENST00000557428 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
PCNX1-215ENST00000557428 TNS2Q63HR2 1409 aa11.72□□□□□ -0.53
PCNX1-215ENST00000557428 EXOC5O00471 708 aa11.72□□□□□ -0.53
PCNX1-215ENST00000557428 CDCA7Q9BWT1 371 aaPredicted RBP11.72□□□□□ -0.53
PCNX1-215ENST00000557428 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
PCNX1-215ENST00000557428 PAPPAQ13219 1627 aa11.71□□□□□ -0.53
PCNX1-215ENST00000557428 CABP1Q9NZU7 370 aa11.71□□□□□ -0.53
PCNX1-215ENST00000557428 BCL9O00512 1426 aa11.7□□□□□ -0.54
PCNX1-215ENST00000557428 CENPJQ9HC77 1338 aaPredicted RBP11.7□□□□□ -0.54
PCNX1-215ENST00000557428 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
PCNX1-215ENST00000557428 SGIP1Q9BQI5 828 aa11.7□□□□□ -0.54
PCNX1-215ENST00000557428 SHANK3Q9BYB0 1731 aa11.69□□□□□ -0.54
PCNX1-215ENST00000557428 BRD4O60885 1362 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-215ENST00000557428 TRPM1Q7Z4N2 1603 aa11.69□□□□□ -0.54
PCNX1-215ENST00000557428 HOXD11P31277 338 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-215ENST00000557428 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
PCNX1-215ENST00000557428 CARD10Q9BWT7 1032 aa11.69□□□□□ -0.54
PCNX1-215ENST00000557428 CEP350Q5VT06 3117 aa11.69□□□□□ -0.54
PCNX1-215ENST00000557428 TUBGCP6Q96RT7 1819 aa11.69□□□□□ -0.54
PCNX1-215ENST00000557428 POLD1P28340 1107 aa11.68□□□□□ -0.54
PCNX1-215ENST00000557428 NBPF1Q3BBV0 1214 aa11.68□□□□□ -0.54
PCNX1-215ENST00000557428 ABCC6O95255 1503 aa11.68□□□□□ -0.54
PCNX1-215ENST00000557428 CCDC7Q96M83 1385 aa11.67□□□□□ -0.54
PCNX1-215ENST00000557428 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
PCNX1-215ENST00000557428 LTN1O94822 1766 aa11.67□□□□□ -0.54
PCNX1-215ENST00000557428 QSER1Q2KHR3 1735 aa11.67□□□□□ -0.54
PCNX1-215ENST00000557428 KCNH5Q8NCM2 988 aa11.67□□□□□ -0.54
PCNX1-215ENST00000557428 GOLGB1Q14789 3259 aaKnown RBP11.66□□□□□ -0.54
PCNX1-215ENST00000557428 ARHGEF25Q86VW2 580 aa11.66□□□□□ -0.54
PCNX1-215ENST00000557428 NLRP2Q9NX02 1062 aa11.66□□□□□ -0.54
PCNX1-215ENST00000557428 NFAT5O94916 1531 aa11.65□□□□□ -0.54
PCNX1-215ENST00000557428 NLGN2Q8NFZ4 835 aa11.65□□□□□ -0.54
PCNX1-215ENST00000557428 TTC21BQ7Z4L5 1316 aa11.64□□□□□ -0.55
PCNX1-215ENST00000557428 DOT1LQ8TEK3 1739 aa11.63□□□□□ -0.55
PCNX1-215ENST00000557428 IL2RBP14784 551 aa11.63□□□□□ -0.55
PCNX1-215ENST00000557428 LRRC4BQ9NT99 713 aa11.63□□□□□ -0.55
PCNX1-215ENST00000557428 TFCP2L1Q9NZI6 479 aa11.63□□□□□ -0.55
PCNX1-215ENST00000557428 EVC2Q86UK5 1308 aa11.62□□□□□ -0.55
PCNX1-215ENST00000557428 KCNQ4P56696 695 aa11.62□□□□□ -0.55
PCNX1-215ENST00000557428 ZNF526Q8TF50 670 aaPredicted RBP11.62□□□□□ -0.55
PCNX1-215ENST00000557428 SYTL4Q96C24 671 aaPredicted RBP11.62□□□□□ -0.55
PCNX1-215ENST00000557428 MON2Q7Z3U7 1717 aa11.62□□□□□ -0.55
PCNX1-215ENST00000557428 PNPLA7Q6ZV29 1317 aa11.61□□□□□ -0.55
PCNX1-215ENST00000557428 TTC21AQ8NDW8 1320 aa11.61□□□□□ -0.55
PCNX1-215ENST00000557428 ATP10DQ9P241 1426 aa11.61□□□□□ -0.55
PCNX1-215ENST00000557428 COL24A1Q17RW2 1714 aa11.61□□□□□ -0.55
PCNX1-215ENST00000557428 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.61□□□□□ -0.552e-6■■□□□ 13.7
PCNX1-215ENST00000557428 SLC16A10Q8TF71 515 aa11.61□□□□□ -0.55
PCNX1-215ENST00000557428 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
PCNX1-215ENST00000557428 YBX3P16989 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
PCNX1-215ENST00000557428 DDX54Q8TDD1 881 aaKnown RBP11.6□□□□□ -0.55
PCNX1-215ENST00000557428 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
PCNX1-215ENST00000557428 ERBB3P21860 1342 aa11.6□□□□□ -0.55
PCNX1-215ENST00000557428 GRIN3BO60391 1043 aa11.59□□□□□ -0.55
PCNX1-215ENST00000557428 MSL1Q68DK7 614 aa11.59□□□□□ -0.55
PCNX1-215ENST00000557428 ANKRD24Q8TF21 1146 aa11.59□□□□□ -0.55
PCNX1-215ENST00000557428 ZNF692Q9BU19 519 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms