RNA–Protein interactions for RNA: ENST00000557372.1

SEL1L-206, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-206ENST00000557372 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
SEL1L-206ENST00000557372 THRAP3Q9Y2W1 955 aaKnown RBP22.3■■□□□ 1.16
SEL1L-206ENST00000557372 BAG6P46379 1132 aa22.29■■□□□ 1.16
SEL1L-206ENST00000557372 CRB1P82279 1406 aa22.29■■□□□ 1.16
SEL1L-206ENST00000557372 EDC4Q6P2E9 1401 aaKnown RBP22.28■■□□□ 1.16
SEL1L-206ENST00000557372 FAM196AQ6ZSG2 479 aa22.27■■□□□ 1.16
SEL1L-206ENST00000557372 COL18A1P39060 1754 aa22.26■■□□□ 1.15
SEL1L-206ENST00000557372 USP31Q70CQ4 1352 aa22.25■■□□□ 1.15
SEL1L-206ENST00000557372 RGPD5Q99666 1765 aa22.25■■□□□ 1.15
SEL1L-206ENST00000557372 TRIM37O94972 964 aa22.25■■□□□ 1.15
SEL1L-206ENST00000557372 WDR17Q8IZU2 1322 aa22.25■■□□□ 1.15
SEL1L-206ENST00000557372 NINLQ9Y2I6 1382 aa22.25■■□□□ 1.15
SEL1L-206ENST00000557372 EN1Q05925 392 aaPredicted RBP22.24■■□□□ 1.15
SEL1L-206ENST00000557372 NFAT5O94916 1531 aa22.24■■□□□ 1.15
SEL1L-206ENST00000557372 RGPD1P0DJD0 1748 aa22.22■■□□□ 1.15
SEL1L-206ENST00000557372 DDB1Q16531 1140 aa22.2■■□□□ 1.14
SEL1L-206ENST00000557372 CDCA8Q53HL2 280 aa22.2■■□□□ 1.14
SEL1L-206ENST00000557372 COG3Q96JB2 828 aa22.2■■□□□ 1.14
SEL1L-206ENST00000557372 APBA3O96018 575 aa22.19■■□□□ 1.14
SEL1L-206ENST00000557372 ANKRD36BQ8N2N9 1353 aa22.18■■□□□ 1.14
SEL1L-206ENST00000557372 CARD10Q9BWT7 1032 aa22.18■■□□□ 1.14
SEL1L-206ENST00000557372 LTN1O94822 1766 aa22.17■■□□□ 1.14
SEL1L-206ENST00000557372 PARP4Q9UKK3 1724 aaKnown RBP22.17■■□□□ 1.14
SEL1L-206ENST00000557372 POLR3GLQ9BT43 218 aa22.17■■□□□ 1.14
SEL1L-206ENST00000557372 NLRP2Q9NX02 1062 aa22.17■■□□□ 1.14
SEL1L-206ENST00000557372 USP54Q70EL1 1684 aa22.17■■□□□ 1.14
SEL1L-206ENST00000557372 OVOS2A0A0J9YW53 1432 aa22.16■■□□□ 1.14
SEL1L-206ENST00000557372 OVOS2Q6IE36 1432 aa22.16■■□□□ 1.14
SEL1L-206ENST00000557372 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
SEL1L-206ENST00000557372 ANKRD24Q8TF21 1146 aa22.15■■□□□ 1.14
SEL1L-206ENST00000557372 CDCA7Q9BWT1 371 aaPredicted RBP22.15■■□□□ 1.14
SEL1L-206ENST00000557372 TNS1Q9HBL0 1735 aaKnown RBP22.14■■□□□ 1.14
SEL1L-206ENST00000557372 FBLN1P23142 703 aa22.14■■□□□ 1.13
SEL1L-206ENST00000557372 LTV1Q96GA3 475 aaPredicted RBP22.14■■□□□ 1.13
SEL1L-206ENST00000557372 ABCC6O95255 1503 aa22.13■■□□□ 1.13
SEL1L-206ENST00000557372 PSDA5PKW4 1024 aaPredicted RBP22.13■■□□□ 1.13
SEL1L-206ENST00000557372 GGNBP2Q9H3C7 697 aa22.13■■□□□ 1.13
SEL1L-206ENST00000557372 LRRC37A3O60309 1634 aa22.13■■□□□ 1.13
SEL1L-206ENST00000557372 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
SEL1L-206ENST00000557372 ERBB3P21860 1342 aa22.12■■□□□ 1.13
SEL1L-206ENST00000557372 EXOC5O00471 708 aa22.12■■□□□ 1.13
SEL1L-206ENST00000557372 AMPHP49418 695 aa22.11■■□□□ 1.13
SEL1L-206ENST00000557372 OVOS2A0A0G2JMS6 1433 aa22.11■■□□□ 1.13
SEL1L-206ENST00000557372 WNK3Q9BYP7 1800 aa22.1■■□□□ 1.13
SEL1L-206ENST00000557372 C11orf95C9JLR9 678 aaPredicted RBP22.1■■□□□ 1.13
SEL1L-206ENST00000557372 FYB1O15117 783 aa22.1■■□□□ 1.13
SEL1L-206ENST00000557372 IP6K1Q92551 441 aa22.1■■□□□ 1.13
SEL1L-206ENST00000557372 CAMKK2Q96RR4 588 aa22.1■■□□□ 1.13
SEL1L-206ENST00000557372 DISP2A7MBM2 1401 aa22.09■■□□□ 1.13
SEL1L-206ENST00000557372 MARCH10Q8NA82 808 aaPredicted RBP22.09■■□□□ 1.13
SEL1L-206ENST00000557372 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.13
SEL1L-206ENST00000557372 EIF4G2P78344 907 aaKnown RBP eCLIP22.08■■□□□ 1.13
SEL1L-206ENST00000557372 HSPA5P11021 654 aaKnown RBP22.07■■□□□ 1.12
SEL1L-206ENST00000557372 RRS1Q15050 365 aaKnown RBP22.07■■□□□ 1.12
SEL1L-206ENST00000557372 IL2RBP14784 551 aa22.06■■□□□ 1.12
SEL1L-206ENST00000557372 HOXC9P31274 260 aa22.06■■□□□ 1.12
SEL1L-206ENST00000557372 R3HDM1Q15032 1099 aaKnown RBP22.06■■□□□ 1.12
SEL1L-206ENST00000557372 CARD14Q9BXL6 1004 aa22.05■■□□□ 1.12
SEL1L-206ENST00000557372 NSD3Q9BZ95 1437 aa22.04■■□□□ 1.12
SEL1L-206ENST00000557372 PEAK1Q9H792 1746 aa22.03■■□□□ 1.12
SEL1L-206ENST00000557372 PTF1AQ7RTS3 328 aa22.03■■□□□ 1.12
SEL1L-206ENST00000557372 MYOM1P52179 1685 aa22.03■■□□□ 1.12
SEL1L-206ENST00000557372 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
SEL1L-206ENST00000557372 KIF20BQ96Q89 1820 aa22.02■■□□□ 1.12
SEL1L-206ENST00000557372 BCL11BQ9C0K0 894 aaPredicted RBP22.02■■□□□ 1.12
SEL1L-206ENST00000557372 SBF2Q86WG5 1849 aa22.01■■□□□ 1.11
SEL1L-206ENST00000557372 TNS2Q63HR2 1409 aa22.01■■□□□ 1.11
SEL1L-206ENST00000557372 NBPF14Q5TI25 921 aa22■■□□□ 1.11
SEL1L-206ENST00000557372 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
SEL1L-206ENST00000557372 DDX54Q8TDD1 881 aaKnown RBP21.97■■□□□ 1.11
SEL1L-206ENST00000557372 KAT6BQ8WYB5 2073 aa21.96■■□□□ 1.11
SEL1L-206ENST00000557372 PPM1GO15355 546 aaPredicted RBP21.96■■□□□ 1.11
SEL1L-206ENST00000557372 KCNQ2O43526 872 aa21.96■■□□□ 1.11
SEL1L-206ENST00000557372 RTL1A6NKG5 1358 aa21.96■■□□□ 1.11
SEL1L-206ENST00000557372 RREB1Q92766 1687 aa21.95■■□□□ 1.1
SEL1L-206ENST00000557372 FAM208AQ9UK61 1670 aaKnown RBP21.95■■□□□ 1.1
SEL1L-206ENST00000557372 PLSCR1O15162 318 aa21.95■■□□□ 1.1
SEL1L-206ENST00000557372 USHBP1Q8N6Y0 703 aa21.95■■□□□ 1.1
SEL1L-206ENST00000557372 CGNL1Q0VF96 1302 aa21.95■■□□□ 1.1
SEL1L-206ENST00000557372 BCL9O00512 1426 aa21.95■■□□□ 1.1
SEL1L-206ENST00000557372 NUP188Q5SRE5 1749 aa21.94■■□□□ 1.1
SEL1L-206ENST00000557372 RGPD2P0DJD1 1756 aa21.94■■□□□ 1.1
SEL1L-206ENST00000557372 SRCAPQ6ZRS2 3230 aa21.94■■□□□ 1.1
SEL1L-206ENST00000557372 HSP90AB2PQ58FF8 381 aa21.94■■□□□ 1.1
SEL1L-206ENST00000557372 SMG6Q86US8 1419 aaKnown RBP21.94■■□□□ 1.1
SEL1L-206ENST00000557372 NBPF6Q5VWK0 638 aa21.93■■□□□ 1.1
SEL1L-206ENST00000557372 NBPF4Q96M43 638 aa21.93■■□□□ 1.1
SEL1L-206ENST00000557372 EMILIN1Q9Y6C2 1016 aa21.93■■□□□ 1.1
SEL1L-206ENST00000557372 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
SEL1L-206ENST00000557372 PANK3Q9H999 370 aa21.92■■□□□ 1.1
SEL1L-206ENST00000557372 FLT4P35916 1363 aa21.91■■□□□ 1.1
SEL1L-206ENST00000557372 INSRP06213 1382 aa21.89■■□□□ 1.1
SEL1L-206ENST00000557372 ZCRB1Q8TBF4 217 aaKnown RBP21.89■■□□□ 1.09
SEL1L-206ENST00000557372 RAPGEF4Q8WZA2 1011 aa21.89■■□□□ 1.09
SEL1L-206ENST00000557372 TXNRD1Q16881 649 aa21.88■■□□□ 1.09
SEL1L-206ENST00000557372 PROM2Q8N271 834 aa21.88■■□□□ 1.09
SEL1L-206ENST00000557372 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
SEL1L-206ENST00000557372 MEGF6O75095 1541 aa21.86■■□□□ 1.09
SEL1L-206ENST00000557372 NHSQ6T4R5 1651 aa21.86■■□□□ 1.09
SEL1L-206ENST00000557372 TATP17735 454 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms