RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 SCARF1Q14162 830 aa10.14□□□□□ -0.79
VRK1-207ENST00000557352 OCSTAMPQ9BR26 566 aa10.14□□□□□ -0.79
VRK1-207ENST00000557352 PTK2Q05397 1052 aa10.13□□□□□ -0.79
VRK1-207ENST00000557352 ZBTB33Q86T24 672 aa10.12□□□□□ -0.79
VRK1-207ENST00000557352 NPAS3Q8IXF0 933 aa10.12□□□□□ -0.79
VRK1-207ENST00000557352 TRIM34Q9BYJ4 488 aa10.12□□□□□ -0.79
VRK1-207ENST00000557352 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
VRK1-207ENST00000557352 VEGFBP49765 207 aa10.11□□□□□ -0.79
VRK1-207ENST00000557352 PNMA1Q8ND90 353 aa10.11□□□□□ -0.79
VRK1-207ENST00000557352 SLC16A10Q8TF71 515 aa10.11□□□□□ -0.79
VRK1-207ENST00000557352 SOBPA7XYQ1 873 aa10.1□□□□□ -0.79
VRK1-207ENST00000557352 H3BM21 787 aa10.1□□□□□ -0.79
VRK1-207ENST00000557352 SLC10A4Q96EP9 437 aa10.1□□□□□ -0.79
VRK1-207ENST00000557352 INSM1Q01101 510 aaPredicted RBP10.09□□□□□ -0.79
VRK1-207ENST00000557352 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
VRK1-207ENST00000557352 MEIOBQ8N635 442 aa10.09□□□□□ -0.79
VRK1-207ENST00000557352 ADAM32Q8TC27 787 aa10.09□□□□□ -0.79
VRK1-207ENST00000557352 C6orf118Q5T5N4 469 aa10.08□□□□□ -0.8
VRK1-207ENST00000557352 KCTD15Q96SI1 283 aaPredicted RBP10.08□□□□□ -0.8
VRK1-207ENST00000557352 CDV3Q9UKY7 258 aaKnown RBP10.08□□□□□ -0.8
VRK1-207ENST00000557352 EMILIN1Q9Y6C2 1016 aa10.08□□□□□ -0.8
VRK1-207ENST00000557352 GJD4Q96KN9 370 aaPredicted RBP10.07□□□□□ -0.8
VRK1-207ENST00000557352 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
VRK1-207ENST00000557352 GMPRP36959 345 aa10.06□□□□□ -0.8
VRK1-207ENST00000557352 PPP1R26Q5T8A7 1209 aaPredicted RBP10.06□□□□□ -0.8
VRK1-207ENST00000557352 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
VRK1-207ENST00000557352 IRF7Q92985 503 aa10.06□□□□□ -0.8
VRK1-207ENST00000557352 STK17AQ9UEE5 414 aa10.06□□□□□ -0.8
VRK1-207ENST00000557352 BMP2P12643 396 aa10.04□□□□□ -0.8
VRK1-207ENST00000557352 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
VRK1-207ENST00000557352 UPP2O95045 317 aa10.03□□□□□ -0.8
VRK1-207ENST00000557352 INTS6LQ5JSJ4 861 aaKnown RBP10.03□□□□□ -0.8
VRK1-207ENST00000557352 BANK1Q8NDB2 785 aa10.03□□□□□ -0.8
VRK1-207ENST00000557352 SOS2Q07890 1332 aaPredicted RBP10.03□□□□□ -0.8
VRK1-207ENST00000557352 MAN1A2O60476 641 aa10.02□□□□□ -0.81
VRK1-207ENST00000557352 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
VRK1-207ENST00000557352 DZIP3Q86Y13 1208 aaKnown RBP10.02□□□□□ -0.81
VRK1-207ENST00000557352 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
VRK1-207ENST00000557352 DHX9Q08211 1270 aaKnown RBP10.01□□□□□ -0.81
VRK1-207ENST00000557352 NBPF20Q3BBV1 942 aa10.01□□□□□ -0.81
VRK1-207ENST00000557352 TSEN34Q9BSV6 310 aaKnown RBP10.01□□□□□ -0.81
VRK1-207ENST00000557352 CBLBQ13191 982 aa10□□□□□ -0.81
VRK1-207ENST00000557352 Q6ZVU0 165 aa10□□□□□ -0.81
VRK1-207ENST00000557352 DNMT3LQ9UJW3 386 aa10□□□□□ -0.81
VRK1-207ENST00000557352 ZBBXA8MT70 800 aa9.99□□□□□ -0.81
VRK1-207ENST00000557352 MTMR14Q8NCE2 650 aa9.99□□□□□ -0.81
VRK1-207ENST00000557352 SOCS7O14512 581 aa9.98□□□□□ -0.81
VRK1-207ENST00000557352 VSIG8P0DPA2 414 aa9.98□□□□□ -0.81
VRK1-207ENST00000557352 SNRKQ9NRH2 765 aa9.98□□□□□ -0.81
VRK1-207ENST00000557352 ESPNB1AK53 854 aa9.97□□□□□ -0.81
VRK1-207ENST00000557352 FBXO45P0C2W1 286 aa9.97□□□□□ -0.81
VRK1-207ENST00000557352 RAB15P59190 212 aa9.97□□□□□ -0.81
VRK1-207ENST00000557352 PPFIA3O75145 1194 aa9.96□□□□□ -0.82
VRK1-207ENST00000557352 TMPRSS4Q9NRS4 437 aa9.96□□□□□ -0.82
VRK1-207ENST00000557352 ERVH48-1M5A8F1 160 aa9.95□□□□□ -0.82
VRK1-207ENST00000557352 GPR37L1O60883 481 aa9.95□□□□□ -0.82
VRK1-207ENST00000557352 TTLL8A6PVC2 850 aa9.94□□□□□ -0.82
VRK1-207ENST00000557352 SPINT1O43278 529 aa9.94□□□□□ -0.82
VRK1-207ENST00000557352 ZSCAN1Q8NBB4 408 aa9.94□□□□□ -0.82
VRK1-207ENST00000557352 ZNF784Q8NCA9 323 aaPredicted RBP9.94□□□□□ -0.82
VRK1-207ENST00000557352 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
VRK1-207ENST00000557352 NDUFB9Q9Y6M9 179 aa9.94□□□□□ -0.82
VRK1-207ENST00000557352 AGBL1Q96MI9 1066 aa9.93□□□□□ -0.82
VRK1-207ENST00000557352 LILRA1O75019 489 aa9.92□□□□□ -0.82
VRK1-207ENST00000557352 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
VRK1-207ENST00000557352 NR1H3Q13133 447 aa9.92□□□□□ -0.82
VRK1-207ENST00000557352 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.92□□□□□ -0.82
VRK1-207ENST00000557352 SEPT12Q8IYM1 358 aa9.92□□□□□ -0.82
VRK1-207ENST00000557352 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
VRK1-207ENST00000557352 APBB1O00213 710 aa9.91□□□□□ -0.82
VRK1-207ENST00000557352 ADD1P35611 737 aaKnown RBP9.91□□□□□ -0.82
VRK1-207ENST00000557352 RELBQ01201 579 aa9.91□□□□□ -0.82
VRK1-207ENST00000557352 PTSQ03393 145 aa9.9□□□□□ -0.82
VRK1-207ENST00000557352 ADH1AP07327 375 aa9.88□□□□□ -0.83
VRK1-207ENST00000557352 CTSOP43234 321 aaPredicted RBP9.88□□□□□ -0.83
VRK1-207ENST00000557352 MCCD1P59942 119 aaPredicted RBP9.87□□□□□ -0.83
VRK1-207ENST00000557352 KDF1Q8NAX2 398 aaPredicted RBP9.87□□□□□ -0.83
VRK1-207ENST00000557352 INSM2Q96T92 566 aaPredicted RBP9.87□□□□□ -0.83
VRK1-207ENST00000557352 ZNF395Q9H8N7 513 aaPredicted RBP9.87□□□□□ -0.83
VRK1-207ENST00000557352 CYLDQ9NQC7 956 aa9.87□□□□□ -0.83
VRK1-207ENST00000557352 ZNF330Q9Y3S2 320 aaPredicted RBP9.87□□□□□ -0.83
VRK1-207ENST00000557352 FAM181BA6NEQ2 426 aa9.86□□□□□ -0.83
VRK1-207ENST00000557352 GPR161Q8N6U8 529 aaKnown RBP9.86□□□□□ -0.83
VRK1-207ENST00000557352 TBC1D2BQ9UPU7 963 aa9.86□□□□□ -0.83
VRK1-207ENST00000557352 ZNF592Q92610 1267 aa9.85□□□□□ -0.83
VRK1-207ENST00000557352 PTGIRP43119 386 aa9.84□□□□□ -0.83
VRK1-207ENST00000557352 RNF20Q5VTR2 975 aa9.84□□□□□ -0.83
VRK1-207ENST00000557352 CCDC125Q86Z20 511 aa9.84□□□□□ -0.83
VRK1-207ENST00000557352 CCDC155Q8N6L0 562 aa9.84□□□□□ -0.83
VRK1-207ENST00000557352 POLMQ9NP87 494 aaPredicted RBP9.84□□□□□ -0.83
VRK1-207ENST00000557352 SLC35F4A4IF30 521 aa9.83□□□□□ -0.84
VRK1-207ENST00000557352 RNF217Q8TC41 542 aa9.83□□□□□ -0.84
VRK1-207ENST00000557352 TRIM52Q96A61 297 aa9.83□□□□□ -0.84
VRK1-207ENST00000557352 KRT76Q01546 638 aa9.82□□□□□ -0.84
VRK1-207ENST00000557352 NANOS1Q8WY41 292 aaKnown RBP9.82□□□□□ -0.84
VRK1-207ENST00000557352 PRM3Q9NNZ6 103 aa9.82□□□□□ -0.84
VRK1-207ENST00000557352 ERVK-9P63128 1117 aa9.81□□□□□ -0.84
VRK1-207ENST00000557352 IRF5Q13568 498 aa9.81□□□□□ -0.84
VRK1-207ENST00000557352 FOXD4L5Q5VV16 416 aaPredicted RBP9.81□□□□□ -0.84
VRK1-207ENST00000557352 CC2D2BQ6DHV5 1058 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms