RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 SBF2Q86WG5 1849 aa26.82■■□□□ 1.88
PRKCH-223ENST00000557294 NLRP6P59044 892 aa26.82■■□□□ 1.88
PRKCH-223ENST00000557294 FHDC1Q9C0D6 1143 aaPredicted RBP26.82■■□□□ 1.88
PRKCH-223ENST00000557294 STK32BQ9NY57 414 aa26.82■■□□□ 1.88
PRKCH-223ENST00000557294 SRPK2P78362 688 aaKnown RBP26.81■■□□□ 1.88
PRKCH-223ENST00000557294 SLC15A2Q16348 729 aa26.81■■□□□ 1.88
PRKCH-223ENST00000557294 TXNRD1Q16881 649 aa26.81■■□□□ 1.88
PRKCH-223ENST00000557294 PPIP5K1Q6PFW1 1433 aa26.8■■□□□ 1.88
PRKCH-223ENST00000557294 MTFR1LQ9H019 292 aa26.79■■□□□ 1.88
PRKCH-223ENST00000557294 AXIN2Q9Y2T1 843 aa26.79■■□□□ 1.88
PRKCH-223ENST00000557294 WDR17Q8IZU2 1322 aa26.78■■□□□ 1.88
PRKCH-223ENST00000557294 LRRC37A3O60309 1634 aa26.78■■□□□ 1.88
PRKCH-223ENST00000557294 SENP3-EIF4A1A0A087X0R7 540 aa26.77■■□□□ 1.88
PRKCH-223ENST00000557294 C1QTNF8P60827 252 aa26.77■■□□□ 1.88
PRKCH-223ENST00000557294 SGIP1Q9BQI5 828 aa26.77■■□□□ 1.88
PRKCH-223ENST00000557294 CABP2Q9NPB3 220 aa26.77■■□□□ 1.88
PRKCH-223ENST00000557294 MYOM1P52179 1685 aa26.76■■□□□ 1.87
PRKCH-223ENST00000557294 EXOC5O00471 708 aa26.74■■□□□ 1.87
PRKCH-223ENST00000557294 CABP1Q9NZU7 370 aa26.74■■□□□ 1.87
PRKCH-223ENST00000557294 CARD10Q9BWT7 1032 aa26.73■■□□□ 1.87
PRKCH-223ENST00000557294 SLIT3O75094 1523 aa26.72■■□□□ 1.87
PRKCH-223ENST00000557294 NBPF1Q3BBV0 1214 aa26.72■■□□□ 1.87
PRKCH-223ENST00000557294 USP6P35125 1406 aa26.72■■□□□ 1.87
PRKCH-223ENST00000557294 ARHGEF25Q86VW2 580 aa26.7■■□□□ 1.86
PRKCH-223ENST00000557294 ARXQ96QS3 562 aa26.7■■□□□ 1.86
PRKCH-223ENST00000557294 CENPJQ9HC77 1338 aaPredicted RBP26.69■■□□□ 1.86
PRKCH-223ENST00000557294 COL18A1P39060 1754 aa26.69■■□□□ 1.86
PRKCH-223ENST00000557294 CSB-PGBD3P0DP91 1061 aa26.67■■□□□ 1.86
PRKCH-223ENST00000557294 KCNH5Q8NCM2 988 aa26.67■■□□□ 1.86
PRKCH-223ENST00000557294 MAP3K5Q99683 1374 aa26.65■■□□□ 1.86
PRKCH-223ENST00000557294 KIAA1210Q9ULL0 1709 aa26.65■■□□□ 1.86
PRKCH-223ENST00000557294 CPSF1Q10570 1443 aaKnown RBP26.65■■□□□ 1.86
PRKCH-223ENST00000557294 CHD4Q14839 1912 aa26.64■■□□□ 1.86
PRKCH-223ENST00000557294 AKAP12Q02952 1782 aa26.62■■□□□ 1.85
PRKCH-223ENST00000557294 IFFO2Q5TF58 517 aa26.62■■□□□ 1.85
PRKCH-223ENST00000557294 ZNF692Q9BU19 519 aaPredicted RBP26.62■■□□□ 1.85
PRKCH-223ENST00000557294 WNK3Q9BYP7 1800 aa26.61■■□□□ 1.85
PRKCH-223ENST00000557294 CCDC7Q96M83 1385 aa26.6■■□□□ 1.85
PRKCH-223ENST00000557294 GPR162Q16538 588 aa26.6■■□□□ 1.85
PRKCH-223ENST00000557294 TTC21BQ7Z4L5 1316 aa26.6■■□□□ 1.85
PRKCH-223ENST00000557294 ACSBG1Q96GR2 724 aa26.58■■□□□ 1.85
PRKCH-223ENST00000557294 PIK3C2AO00443 1686 aa26.57■■□□□ 1.84
PRKCH-223ENST00000557294 SOX12O15370 315 aa26.56■■□□□ 1.84
PRKCH-223ENST00000557294 GIGYF1O75420 1035 aaPredicted RBP26.55■■□□□ 1.84
PRKCH-223ENST00000557294 TNS2Q63HR2 1409 aa26.55■■□□□ 1.84
PRKCH-223ENST00000557294 SLC16A10Q8TF71 515 aa26.54■■□□□ 1.84
PRKCH-223ENST00000557294 EVC2Q86UK5 1308 aa26.54■■□□□ 1.84
PRKCH-223ENST00000557294 TTC21AQ8NDW8 1320 aa26.54■■□□□ 1.84
PRKCH-223ENST00000557294 ZNF827Q17R98 1081 aa26.53■■□□□ 1.84
PRKCH-223ENST00000557294 LRRC4BQ9NT99 713 aa26.52■■□□□ 1.84
PRKCH-223ENST00000557294 RGPD5Q99666 1765 aa26.51■■□□□ 1.83
PRKCH-223ENST00000557294 TRPM1Q7Z4N2 1603 aa26.51■■□□□ 1.83
PRKCH-223ENST00000557294 NHSQ6T4R5 1651 aa26.5■■□□□ 1.83
PRKCH-223ENST00000557294 PAPPAQ13219 1627 aa26.5■■□□□ 1.83
PRKCH-223ENST00000557294 IL2RBP14784 551 aa26.49■■□□□ 1.83
PRKCH-223ENST00000557294 AKT1S1Q96B36 256 aa26.49■■□□□ 1.83
PRKCH-223ENST00000557294 QRICH2Q9H0J4 1663 aa26.48■■□□□ 1.83
PRKCH-223ENST00000557294 POLD1P28340 1107 aa26.48■■□□□ 1.83
PRKCH-223ENST00000557294 NLRP2Q9NX02 1062 aa26.48■■□□□ 1.83
PRKCH-223ENST00000557294 GOLGB1Q14789 3259 aaKnown RBP26.48■■□□□ 1.83
PRKCH-223ENST00000557294 NFAT5O94916 1531 aa26.46■■□□□ 1.83
PRKCH-223ENST00000557294 ABCC6O95255 1503 aa26.45■■□□□ 1.83
PRKCH-223ENST00000557294 ERBB3P21860 1342 aa26.45■■□□□ 1.83
PRKCH-223ENST00000557294 SLC27A3Q5K4L6 730 aa26.45■■□□□ 1.82
PRKCH-223ENST00000557294 KLHL34Q8N239 644 aa26.45■■□□□ 1.82
PRKCH-223ENST00000557294 CEP350Q5VT06 3117 aa26.45■■□□□ 1.82
PRKCH-223ENST00000557294 PELP1Q8IZL8 1130 aaKnown RBP26.44■■□□□ 1.82
PRKCH-223ENST00000557294 KTN1Q86UP2 1357 aaKnown RBP26.41■■□□□ 1.82
PRKCH-223ENST00000557294 PNPLA7Q6ZV29 1317 aa26.4■■□□□ 1.82
PRKCH-223ENST00000557294 BTAF1O14981 1849 aa26.39■■□□□ 1.82
PRKCH-223ENST00000557294 USP31Q70CQ4 1352 aa26.39■■□□□ 1.82
PRKCH-223ENST00000557294 GRIN3BO60391 1043 aa26.39■■□□□ 1.82
PRKCH-223ENST00000557294 NLGN2Q8NFZ4 835 aa26.39■■□□□ 1.82
PRKCH-223ENST00000557294 TFCP2L1Q9NZI6 479 aa26.39■■□□□ 1.82
PRKCH-223ENST00000557294 ANKRD24Q8TF21 1146 aa26.38■■□□□ 1.81
PRKCH-223ENST00000557294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.36■■□□□ 1.81
PRKCH-223ENST00000557294 COL24A1Q17RW2 1714 aa26.34■■□□□ 1.81
PRKCH-223ENST00000557294 DDX54Q8TDD1 881 aaKnown RBP26.34■■□□□ 1.81
PRKCH-223ENST00000557294 YBX3P16989 372 aaKnown RBP eCLIP26.33■■□□□ 1.81
PRKCH-223ENST00000557294 SHANK3Q9BYB0 1731 aa26.33■■□□□ 1.81
PRKCH-223ENST00000557294 QSER1Q2KHR3 1735 aa26.32■■□□□ 1.8
PRKCH-223ENST00000557294 NME9Q86XW9 330 aa26.32■■□□□ 1.8
PRKCH-223ENST00000557294 L3MBTL2Q969R5 705 aa26.32■■□□□ 1.8
PRKCH-223ENST00000557294 KAT6BQ8WYB5 2073 aa26.32■■□□□ 1.8
PRKCH-223ENST00000557294 KCNQ4P56696 695 aa26.31■■□□□ 1.8
PRKCH-223ENST00000557294 PRIM1P49642 420 aaKnown RBP26.29■■□□□ 1.8
PRKCH-223ENST00000557294 SYTL4Q96C24 671 aaPredicted RBP26.28■■□□□ 1.8
PRKCH-223ENST00000557294 ANKRD36BQ8N2N9 1353 aa26.26■■□□□ 1.79
PRKCH-223ENST00000557294 SBNO2Q9Y2G9 1366 aa26.26■■□□□ 1.79
PRKCH-223ENST00000557294 IP6K1Q92551 441 aa26.25■■□□□ 1.79
PRKCH-223ENST00000557294 ROCK2O75116 1388 aaKnown RBP26.24■■□□□ 1.79
PRKCH-223ENST00000557294 COL23A1Q86Y22 540 aaPredicted RBP26.24■■□□□ 1.79
PRKCH-223ENST00000557294 ATP10DQ9P241 1426 aa26.23■■□□□ 1.79
PRKCH-223ENST00000557294 USP54Q70EL1 1684 aa26.23■■□□□ 1.79
PRKCH-223ENST00000557294 CCNL1Q9UK58 526 aaPredicted RBP26.23■■□□□ 1.79
PRKCH-223ENST00000557294 MON2Q7Z3U7 1717 aa26.22■■□□□ 1.79
PRKCH-223ENST00000557294 MSH5O43196 834 aa26.22■■□□□ 1.79
PRKCH-223ENST00000557294 HDGFL2Q7Z4V5 671 aaPredicted RBP26.22■■□□□ 1.79
PRKCH-223ENST00000557294 GPBP1L1Q9HC44 474 aaPredicted RBP26.22■■□□□ 1.79
PRKCH-223ENST00000557294 LTN1O94822 1766 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms