RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 ABCC6O95255 1503 aa28.65■■■□□ 2.18
SEC23A-213ENST00000557280 STRN4Q9NRL3 753 aa28.65■■■□□ 2.18
SEC23A-213ENST00000557280 TRPC5Q9UL62 973 aaPredicted RBP28.65■■■□□ 2.18
SEC23A-213ENST00000557280 PEAK1Q9H792 1746 aa28.65■■■□□ 2.18
SEC23A-213ENST00000557280 GLI3P10071 1580 aa28.64■■■□□ 2.18
SEC23A-213ENST00000557280 TNNT2P45379 298 aaPredicted RBP28.64■■■□□ 2.18
SEC23A-213ENST00000557280 CC2D1BQ5T0F9 858 aaKnown RBP28.64■■■□□ 2.18
SEC23A-213ENST00000557280 DDX10Q13206 875 aaKnown RBP28.62■■■□□ 2.17
SEC23A-213ENST00000557280 CNGB1Q14028 1251 aaPredicted RBP28.62■■■□□ 2.17
SEC23A-213ENST00000557280 VPS72Q15906 364 aa28.62■■■□□ 2.17
SEC23A-213ENST00000557280 ZNF316A6NFI3 1004 aaPredicted RBP28.61■■■□□ 2.17
SEC23A-213ENST00000557280 EMILIN1Q9Y6C2 1016 aa28.61■■■□□ 2.17
SEC23A-213ENST00000557280 MORC1Q86VD1 984 aa28.6■■■□□ 2.17
SEC23A-213ENST00000557280 NPC1L1Q9UHC9 1359 aa28.6■■■□□ 2.17
SEC23A-213ENST00000557280 LARP1Q6PKG0 1096 aaKnown RBP28.59■■■□□ 2.17
SEC23A-213ENST00000557280 ILDR2Q71H61 639 aa28.59■■■□□ 2.17
SEC23A-213ENST00000557280 HOXC9P31274 260 aa28.58■■■□□ 2.17
SEC23A-213ENST00000557280 GJD4Q96KN9 370 aaPredicted RBP28.58■■■□□ 2.17
SEC23A-213ENST00000557280 IP6K1Q92551 441 aa28.57■■■□□ 2.16
SEC23A-213ENST00000557280 CCDC9Q9Y3X0 531 aaKnown RBP28.57■■■□□ 2.16
SEC23A-213ENST00000557280 RTL1A6NKG5 1358 aa28.57■■■□□ 2.16
SEC23A-213ENST00000557280 RXRBP28702 533 aa28.56■■■□□ 2.16
SEC23A-213ENST00000557280 AMPHP49418 695 aa28.56■■■□□ 2.16
SEC23A-213ENST00000557280 EVA1CP58658 441 aa28.56■■■□□ 2.16
SEC23A-213ENST00000557280 RBM6P78332 1123 aaKnown RBP28.56■■■□□ 2.16
SEC23A-213ENST00000557280 SPATA31A5Q5VU36 1347 aa28.56■■■□□ 2.16
SEC23A-213ENST00000557280 SPATA31A7Q8IWB4 1347 aa28.56■■■□□ 2.16
SEC23A-213ENST00000557280 BLMP54132 1417 aaPredicted RBP28.55■■■□□ 2.16
SEC23A-213ENST00000557280 POLKQ9UBT6 870 aa28.55■■■□□ 2.16
SEC23A-213ENST00000557280 RGS12O14924 1447 aa28.54■■■□□ 2.16
SEC23A-213ENST00000557280 MAP2P11137 1827 aaKnown RBP28.54■■■□□ 2.16
SEC23A-213ENST00000557280 ERBB3P21860 1342 aa28.53■■■□□ 2.16
SEC23A-213ENST00000557280 SPATA31A1Q5TZJ5 1347 aa28.53■■■□□ 2.16
SEC23A-213ENST00000557280 WDR17Q8IZU2 1322 aa28.53■■■□□ 2.16
SEC23A-213ENST00000557280 SMG6Q86US8 1419 aaKnown RBP28.52■■■□□ 2.16
SEC23A-213ENST00000557280 FLT4P35916 1363 aa28.52■■■□□ 2.16
SEC23A-213ENST00000557280 ANKRD24Q8TF21 1146 aa28.52■■■□□ 2.16
SEC23A-213ENST00000557280 CRB1P82279 1406 aa28.52■■■□□ 2.16
SEC23A-213ENST00000557280 PPM1GO15355 546 aaPredicted RBP28.51■■■□□ 2.15
SEC23A-213ENST00000557280 USP35Q9P2H5 1018 aa28.51■■■□□ 2.15
SEC23A-213ENST00000557280 HSP90AB2PQ58FF8 381 aa28.5■■■□□ 2.15
SEC23A-213ENST00000557280 LTV1Q96GA3 475 aaPredicted RBP28.5■■■□□ 2.15
SEC23A-213ENST00000557280 CSB-PGBD3P0DP91 1061 aa28.49■■■□□ 2.15
SEC23A-213ENST00000557280 KIF24Q5T7B8 1368 aa28.49■■■□□ 2.15
SEC23A-213ENST00000557280 CDK12Q9NYV4 1490 aaPredicted RBP28.48■■■□□ 2.15
SEC23A-213ENST00000557280 TOM1L2Q6ZVM7 507 aa28.48■■■□□ 2.15
SEC23A-213ENST00000557280 INSRP06213 1382 aa28.48■■■□□ 2.15
SEC23A-213ENST00000557280 FAM98CQ17RN3 349 aaKnown RBP28.47■■■□□ 2.15
SEC23A-213ENST00000557280 THSD7AQ9UPZ6 1657 aa28.45■■■□□ 2.14
SEC23A-213ENST00000557280 RGPD2P0DJD1 1756 aa28.45■■■□□ 2.14
SEC23A-213ENST00000557280 FAM208AQ9UK61 1670 aaKnown RBP28.42■■■□□ 2.14
SEC23A-213ENST00000557280 TCP11L2Q8N4U5 519 aa28.42■■■□□ 2.14
SEC23A-213ENST00000557280 CARD10Q9BWT7 1032 aa28.42■■■□□ 2.14
SEC23A-213ENST00000557280 NLRP2Q9NX02 1062 aa28.42■■■□□ 2.14
SEC23A-213ENST00000557280 WNK3Q9BYP7 1800 aa28.41■■■□□ 2.14
SEC23A-213ENST00000557280 PARD3Q8TEW0 1356 aa28.41■■■□□ 2.14
SEC23A-213ENST00000557280 ONECUT3O60422 494 aaPredicted RBP28.4■■■□□ 2.14
SEC23A-213ENST00000557280 SEPT12Q8IYM1 358 aa28.4■■■□□ 2.14
SEC23A-213ENST00000557280 MTHFSP49914 203 aa28.39■■■□□ 2.14
SEC23A-213ENST00000557280 BARGINQ6ZT62 677 aa28.39■■■□□ 2.14
SEC23A-213ENST00000557280 DISP2A7MBM2 1401 aa28.37■■■□□ 2.13
SEC23A-213ENST00000557280 BRWD3Q6RI45 1802 aa28.37■■■□□ 2.13
SEC23A-213ENST00000557280 A0A0G2JS52 829 aa28.37■■■□□ 2.13
SEC23A-213ENST00000557280 MYT1Q01538 1121 aa28.37■■■□□ 2.13
SEC23A-213ENST00000557280 EIF4A2Q14240 407 aaKnown RBP28.37■■■□□ 2.13
SEC23A-213ENST00000557280 NBPF6Q5VWK0 638 aa28.37■■■□□ 2.13
SEC23A-213ENST00000557280 NBPF4Q96M43 638 aa28.37■■■□□ 2.13
SEC23A-213ENST00000557280 THRAP3Q9Y2W1 955 aaKnown RBP28.37■■■□□ 2.13
SEC23A-213ENST00000557280 USHBP1Q8N6Y0 703 aa28.36■■■□□ 2.13
SEC23A-213ENST00000557280 PPP2R1AP30153 589 aa28.35■■■□□ 2.13
SEC23A-213ENST00000557280 LRRC37A3O60309 1634 aa28.34■■■□□ 2.13
SEC23A-213ENST00000557280 COL3A1P02461 1466 aaPredicted RBP28.34■■■□□ 2.13
SEC23A-213ENST00000557280 PARP4Q9UKK3 1724 aaKnown RBP28.33■■■□□ 2.13
SEC23A-213ENST00000557280 NCAPD2Q15021 1401 aa28.3■■■□□ 2.12
SEC23A-213ENST00000557280 EYA1Q99502 592 aa28.3■■■□□ 2.12
SEC23A-213ENST00000557280 MEGF6O75095 1541 aa28.29■■■□□ 2.12
SEC23A-213ENST00000557280 RGPD1P0DJD0 1748 aa28.28■■■□□ 2.12
SEC23A-213ENST00000557280 IL13P35225 146 aa28.27■■■□□ 2.12
SEC23A-213ENST00000557280 RALBP1Q15311 655 aa28.26■■■□□ 2.11
SEC23A-213ENST00000557280 IGSF1Q8N6C5 1336 aa28.25■■■□□ 2.11
SEC23A-213ENST00000557280 IL2RBP14784 551 aa28.25■■■□□ 2.11
SEC23A-213ENST00000557280 KRT27Q7Z3Y8 459 aa28.24■■■□□ 2.11
SEC23A-213ENST00000557280 FAM182BQ5T319 152 aa28.23■■■□□ 2.11
SEC23A-213ENST00000557280 CDCA7Q9BWT1 371 aaPredicted RBP28.23■■■□□ 2.11
SEC23A-213ENST00000557280 PRKRIP1Q9H875 184 aaPredicted RBP28.23■■■□□ 2.11
SEC23A-213ENST00000557280 TNS2Q63HR2 1409 aa28.23■■■□□ 2.11
SEC23A-213ENST00000557280 OVOS2A0A0G2JMS6 1433 aa28.21■■■□□ 2.11
SEC23A-213ENST00000557280 DDB1Q16531 1140 aa28.21■■■□□ 2.11
SEC23A-213ENST00000557280 AEBP1Q8IUX7 1158 aa28.21■■■□□ 2.11
SEC23A-213ENST00000557280 DIAPH1O60610 1272 aaKnown RBP28.2■■■□□ 2.1
SEC23A-213ENST00000557280 SHANK3Q9BYB0 1731 aa28.19■■■□□ 2.1
SEC23A-213ENST00000557280 MYBBP1AQ9BQG0 1328 aaKnown RBP28.18■■■□□ 2.1
SEC23A-213ENST00000557280 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
SEC23A-213ENST00000557280 RAPGEF4Q8WZA2 1011 aa28.16■■■□□ 2.1
SEC23A-213ENST00000557280 CFAP53Q96M91 514 aa28.16■■■□□ 2.1
SEC23A-213ENST00000557280 EP400Q96L91 3159 aa28.16■■■□□ 2.1
SEC23A-213ENST00000557280 EXOC5O00471 708 aa28.15■■■□□ 2.1
SEC23A-213ENST00000557280 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
SEC23A-213ENST00000557280 TATP17735 454 aaPredicted RBP28.14■■■□□ 2.1
SEC23A-213ENST00000557280 SULT6B1Q6IMI4 303 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms